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Protein

Isochorismatase domain-containing protein 1

Gene

isoc1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Isochorismatase domain-containing protein 1
Gene namesi
Name:isoc1
ORF Names:zgc:153699
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 10

Organism-specific databases

ZFINiZDB-GENE-061020-1 isoc1

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002686671 – 283Isochorismatase domain-containing protein 1Add BLAST283

Proteomic databases

PaxDbiQ08C33
PRIDEiQ08C33

Expressioni

Gene expression databases

BgeeiENSDARG00000060069

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000110335

Structurei

3D structure databases

ProteinModelPortaliQ08C33
SMRiQ08C33
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the isochorismatase family.Curated

Phylogenomic databases

eggNOGiKOG4044 Eukaryota
ENOG4111I3F LUCA
GeneTreeiENSGT00390000006753
HOGENOMiHOG000231573
HOVERGENiHBG056777
InParanoidiQ08C33
OMAiEWSQYID
OrthoDBiEOG091G0LXB
PhylomeDBiQ08C33
TreeFamiTF313459

Family and domain databases

Gene3Di3.40.50.850, 1 hit
InterProiView protein in InterPro
IPR000868 Isochorismatase-like
IPR036380 Isochorismatase-like_sf
PfamiView protein in Pfam
PF00857 Isochorismatase, 1 hit
SUPFAMiSSF52499 SSF52499, 1 hit

Sequencei

Sequence statusi: Complete.

Q08C33-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADTHSNNNH VPVLFSFSVF SRASSVPVGS GYEVLIQKFL SIYGSQIDVH
60 70 80 90 100
RKLVLQYFSE EWGQYIDLPK GFTVSEKCRL RLVPLQMDIT TLGNLSPATS
110 120 130 140 150
VFFCCDMQER FRPAIKYFGD IISVGQRLLQ GARILGIPVV VSEQYPKGLG
160 170 180 190 200
STVQEMDLTG AKLVFPKTKF SMVIPELEAA LAEIPGVRSV VLFGVETHVC
210 220 230 240 250
IQQTALDLIG RGFEVHIVAD ATSSRSMMDR MFALERLART GIIITTSESV
260 270 280
LLQLVADKEH PKFKEIQNII KVSAPESGLL SKV
Length:283
Mass (Da):31,325
Last modified:October 31, 2006 - v1
Checksum:i1714ED82E057C5A0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC124430 mRNA Translation: AAI24431.1
RefSeqiNP_001073450.1, NM_001079981.1
UniGeneiDr.79345

Genome annotation databases

EnsembliENSDART00000084278; ENSDARP00000078713; ENSDARG00000060069
GeneIDi559897
KEGGidre:559897

Similar proteinsi

Entry informationi

Entry nameiISOC1_DANRE
AccessioniPrimary (citable) accession number: Q08C33
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 31, 2006
Last modified: March 28, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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