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Entry version 134 (02 Jun 2021)
Sequence version 2 (28 Jul 2009)
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Protein

tRNA nuclease WapA

Gene

wapA

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Toxic component of a toxin-immunity protein module, which functions as a cellular contact-dependent growth inhibition (CDI) system. A site-specific general tRNA nuclease, the C-terminus (residues 2201-2334) removes 2 or 4 nucleotides from the 3' end of at least 4 tRNAs (upon expression in E.coli), possibly endonucleolytically. The nuclease activity is neutralized by expression of the cognate immunity protein WapI from the same strain, but not its homolog from 2 other B.subtilis strains. The C-terminus cannot be expressed on its own in E.coli, however it can be cloned in the presence of its cognate immunity protein gene. Cell contact is necessary for growth inhibition.

1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes regulatory mechanisms for enzymes, transporters or microbial transcription factors, and reports the components which regulate (by activation or inhibition) the reaction.<p><a href='/help/activity_regulation' target='_top'>More...</a></p>Activity regulationi

Detected in exponentially growing cells as many processing products, protein disappears upon entry into stationary phase with the concomitant appearance of smaller products. The large products persist in the absence of the extracellular serine protease Epr (PubMed:11987133).1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionEndonuclease, Hydrolase, Nuclease, Toxin
Biological processVirulence

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
BSUB:BSU39230-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
tRNA nuclease WapA (EC:3.1.-.-)
Alternative name(s):
Cell wall-associated polypeptide CWBP200
Short name:
CWBP200
RNase WapA
Toxin WapA
Wall-associated protein
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:wapA
Ordered Locus Names:BSU39230
ORF Names:N17G
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBacillus subtilis (strain 168)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri224308 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001570 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Cell wall, Secreted

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

A double wapA-wapI deletion strain is growth inhibited when cocultured with wild-type cells. When wapI is reintroduced it restores growth in a cognate-toxin fashion.1 Publication

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 28Or 32Sequence analysisAdd BLAST28
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000002268929 – 2334tRNA nuclease WapAAdd BLAST2306

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Identified in the extracellular proteome as many processing products ranging from over 85 kDa to about 30 kDa. One of these probably starts on Ser-1726. Two forms are known as CWBP62 and CWBP105 (PubMed:11987133).1 Publication

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q07833

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q07833

PRoteomics IDEntifications database

More...
PRIDEi
Q07833

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

Protein interaction database and analysis system

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IntActi
Q07833, 1 interactor

STRING: functional protein association networks

More...
STRINGi
224308.BSU39230

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q07833

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati504 – 6051-1Add BLAST102
Repeati636 – 7361-2Add BLAST101
Repeati769 – 8691-3Add BLAST101
Repeati1021 – 10402-1Add BLAST20
Repeati1032 – 1065YD 1Add BLAST34
Repeati1042 – 10612-2Add BLAST20
Repeati1063 – 10822-3Add BLAST20
Repeati1075 – 1103YD 2Add BLAST29
Repeati1083 – 11022-4Add BLAST20
Repeati1109 – 11282-5Add BLAST20
Repeati1129 – 11482-6Add BLAST20
Repeati1150 – 11692-7Add BLAST20
Repeati1174 – 11932-8Add BLAST20
Repeati1199 – 12182-9Add BLAST20
Repeati1219 – 12382-10Add BLAST20
Repeati1636 – 1671YD 3Add BLAST36
Repeati1646 – 16652-11Add BLAST20
Repeati1667 – 16862-12Add BLAST20
Repeati1690 – 17092-13Add BLAST20
Repeati1711 – 17302-14Add BLAST20
Repeati1732 – 17512-15Add BLAST20
Repeati1753 – 17722-16Add BLAST20
Repeati1795 – 18142-17Add BLAST20
Repeati1820 – 18392-18Add BLAST20
Repeati1840 – 18592-19Add BLAST20
Repeati1861 – 18802-20Add BLAST20
Repeati1887 – 19062-21Add BLAST20
Repeati1898 – 1935YD 4Add BLAST38
Repeati1908 – 19272-22Add BLAST20
Repeati1929 – 19482-23Add BLAST20
Repeati1969 – 19822-24; approximateAdd BLAST14
Repeati1983 – 20022-25Add BLAST20
Repeati2008 – 20272-26Add BLAST20
Repeati2028 – 20472-27Add BLAST20
Repeati2051 – 20702-28Add BLAST20
Repeati2071 – 20902-29Add BLAST20
Repeati2082 – 2113YD 5Add BLAST32
Repeati2093 – 21122-30Add BLAST20
Repeati2120 – 21392-31Add BLAST20

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni36 – 59DisorderedSequence analysisAdd BLAST24
Regioni504 – 8693 X 101 AA approximate tandem repeatsAdd BLAST366
Regioni1021 – 213931 X 21 AA approximate tandem repeats of X(4)-G-X(4)-[YF]-X-D-X(2)-G-X(4)Add BLAST1119
Regioni2312 – 2334DisorderedSequence analysisAdd BLAST23

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi2317 – 2334Basic residuesSequence analysisAdd BLAST18

<p>This subsection of the 'Family and domains' section provides general information on the biological role of a domain. The term 'domain' is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

Has two ligand-binding domains; the N-terminus has three 101 AA repeats which are responsible for cell wall binding; the C-terminus consists of two blocks of residues with a conserved motif repeated 31 times.

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the RHS/WapA nuclease family.Curated

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
COG3209, Bacteria

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q07833

Identification of Orthologs from Complete Genome Data

More...
OMAi
GKKIWPT

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
2.60.120.260, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR008979, Galactose-bd-like_sf
IPR022385, Rhs_assc_core
IPR031325, RHS_repeat
IPR006530, YD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05593, RHS_repeat, 4 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49785, SSF49785, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR03696, Rhs_assc_core, 1 hit
TIGR01643, YD_repeat_2x, 5 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

Q07833-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKKRKRRNFK RFIAAFLVLA LMISLVPADV LAKSTEEENG NRIAADDPEE
60 70 80 90 100
TLQKEQTEEA VPFDPKDINK EGEITSERTE NTKLYYEGDG VYKQEVYLDP
110 120 130 140 150
IHTKETPDAD WEDISPELKE STSKQVETEN AILNSDFQKQ MKNGLYATFE
160 170 180 190 200
HNDHKVTYSL AEAKGPNKTS LTPKDTSADY KTDSNEIVYP DVFPNIDLQT
210 220 230 240 250
FTFNENIKED LVLHQYNGYN TFTFQLKTDL QAKEQEDGSI DFSDEKGKVV
260 270 280 290 300
FSVPKPFMTD SKLDELSGEV ERSDKVSYKL EKNEEGYLLH LTADENWLKD
310 320 330 340 350
PERVYPVSID PSTSLSVSSD TFVMSAYPTT NYSASSQKWD ANLKAYVLKT
360 370 380 390 400
GYYDKTTGTN YAFMKFNNLK PIQNMTVTKA TLKTYVAHSY YGTKATGLWL
410 420 430 440 450
DTVNSNYDNA KVTWNTKPAS KNIGKADVHK GQWASYDVTA AVKSWNSGGA
460 470 480 490 500
NYGFKLHTNG NGKEYWKKLI SSANSANKPY IEVTYTIPKG NTPTIKAYHN
510 520 530 540 550
GDSTGYFDIS WKKVEGAKGY KVWIYNGKEY QAISAGNVTS WSTKGKKIWP
560 570 580 590 600
TSAEIASKRY KLHLDGKDGA ELALDPSPVY KNSGGSYATS KNYWIGVSAI
610 620 630 640 650
FDQGEGAMSA PAKPVIPNVG KAQAPSAKGY NNGNATGYFD LSWKAVSGAT
660 670 680 690 700
GYKVQVFNGK GFETLDLGNQ TSWTTKGKKI WPTSAEIKAG KYALHLKDGS
710 720 730 740 750
GAELPINPGP TYKNAGGDGA KRNYSFKIIA YNKDGEAIAS PAATPALPDI
760 770 780 790 800
ARPKNVTGYL YTNTKSSQTG YVNLIWEKVQ NAKGYKVNIY NGKEYQSFDV
810 820 830 840 850
GDADHWTTQN KNIWPTSEEI KAGSYKLHTD GKGGELALDP SPVYNNANGN
860 870 880 890 900
YKGKKNYSFT LVAYDANGET IPTAPFNPTF HEGAEFLGTE EYWSIIDIPS
910 920 930 940 950
GQLNGATGNV IVNEEDLSID GRGPGLGLSR TYNSLDSSDH LFGQGWYADA
960 970 980 990 1000
ETSVISTDGG AMYIDEDATT HRFTKKADGT YQPPTGVYLE LTETADQFIL
1010 1020 1030 1040 1050
KTKDQTNAYF NKKGGKLQKV VDGHNNATVY TYNDKNQLTA ITDASGRKLT
1060 1070 1080 1090 1100
FTYDENGHVT SITGPKNKKV TYSYENDLLK KVTDTDGTVT SYDYDSEGRL
1110 1120 1130 1140 1150
VKQYSANSTE AKPVFTEYQY SGHRLEKAIN AKKETYVYSY DADKKTLLMT
1160 1170 1180 1190 1200
QPNGRKVQYG YNEAGNPIQV IDDAEGLKIT TNTKYEGNNV VEDVDPNDVG
1210 1220 1230 1240 1250
TGKATESYQY DKDGNVTSVK DAYGTETYEY NKNNDVTKMK DTEGNVTDIA
1260 1270 1280 1290 1300
YDGLDAVSET DQSGKSSSAA VYDKYGNQIQ SSKDLSASTN ILKDGSFEAQ
1310 1320 1330 1340 1350
KSGWNLTASK DSGKISVIAD KSGVLSGSKA LEVLSQSTSA GTDHGYSSAT
1360 1370 1380 1390 1400
QTVELEPNTT YTLSGKIKTD LAKSRAYFNI DLRDKDQKRI QWIHNEYSAL
1410 1420 1430 1440 1450
AGKNDWTKRQ ITFTTPANAG KAVVYMEVDH KDKDGKGKAW FDEVQLEKGE
1460 1470 1480 1490 1500
VSSSYNPVQN SSFTSATENW NVSGASVDSE EGFNDDVSLK AARTSASQAG
1510 1520 1530 1540 1550
SVTKQTVVLG QSANDKPVYL TLTGMSKASS VKFTDEKDYS LQANVTYADG
1560 1570 1580 1590 1600
STGIYNAKFP SGTQEWNRAA VVIPKTKPIN KVDISILFQK SATGTVWFDD
1610 1620 1630 1640 1650
IRLIEGSLLT KSTYDSNGNY VTKEEDELGY ATSTDYDETG KKTSETDAKG
1660 1670 1680 1690 1700
EKTTYTYDQA DQLTNMTLSN GTSILHSYDK EGNEVSKTIR AGADQTYKFE
1710 1720 1730 1740 1750
YDVMGKLVKT TDPLGNVLAS EYDANSNLTK TISPNGNEVS LSYDGTDRVK
1760 1770 1780 1790 1800
SKSYNGTEKY IFTYDKNGNE TSVVNKEQNT TKKRTFDNKN RLTELTDRGG
1810 1820 1830 1840 1850
SQTWTYPSDS DKLKTFSWIH GDQKGTNQFT YNKLDQMIEM KDSTSSYSFD
1860 1870 1880 1890 1900
YDENGNVQTF ITGNGGGTSF SYDERNLVSS LHIGDKNGGD ILTESYEYDA
1910 1920 1930 1940 1950
NGNRTTINSS ASGKVQYEYG KLNQLVKETH EDGTVIEYTY DGFGNRKTVT
1960 1970 1980 1990 2000
TIKDGSSKTV NASFNIMNQL TKVNDESISY DKNGNRTSDG KFTYTWDAED
2010 2020 2030 2040 2050
NLTAVTKKGE DKPFATYKYD EKGNRIQKTV NGKVTNYFYD GDSLNVLYET
2060 2070 2080 2090 2100
DADNNVTKSY TYGDSGQLLS YTENGKKYFY HYNAHGDIIA ISDSTGKTVA
2110 2120 2130 2140 2150
KYQYDAWGNP TKTEASDEVK DNRYRYAGYQ YDEETGLYYL MARYYEPRNG
2160 2170 2180 2190 2200
VFLSLDPDPG SDGDSLDQNG YAYGNNNPVM NVDPDGHWVW LVVNAGFAAY
2210 2220 2230 2240 2250
DGYKAYKSGK GWKGAAWAAA SNFGPGKIFK GASRAYKFTK KAVKITGHTR
2260 2270 2280 2290 2300
HGLNQSIGRN GGRGVNLRAK LNAVRSPKKV IKQPNGATKY VGKKATVVLN
2310 2320 2330
KRGKVITAYG SSRAKGSKHV FHTHGKGNKS KRRR
Length:2,334
Mass (Da):258,162
Last modified:July 28, 2009 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iDAE0897CD279AEB6
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti1312 – 1313SG → RR in AAA22883 (PubMed:8316082).Curated2
Sequence conflicti1312 – 1313SG → RR in BAA06656 (PubMed:7704263).Curated2
Sequence conflicti1312 – 1313SG → RR in BAA06260 (PubMed:8969509).Curated2

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
L05634 Genomic DNA Translation: AAA22883.1
D31856 Genomic DNA Translation: BAA06656.1
D29985 Genomic DNA Translation: BAA06260.1
D83026 Genomic DNA Translation: BAA11683.1
AL009126 Genomic DNA Translation: CAB15959.2

Protein sequence database of the Protein Information Resource

More...
PIRi
S32920

NCBI Reference Sequences

More...
RefSeqi
NP_391802.2, NC_000964.3
WP_003243665.1, NZ_JNCM01000034.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

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EnsemblBacteriai
CAB15959; CAB15959; BSU_39230

Database of genes from NCBI RefSeq genomes

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GeneIDi
937525

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
bsu:BSU39230

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|224308.179.peg.4247

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L05634 Genomic DNA Translation: AAA22883.1
D31856 Genomic DNA Translation: BAA06656.1
D29985 Genomic DNA Translation: BAA06260.1
D83026 Genomic DNA Translation: BAA11683.1
AL009126 Genomic DNA Translation: CAB15959.2
PIRiS32920
RefSeqiNP_391802.2, NC_000964.3
WP_003243665.1, NZ_JNCM01000034.1

3D structure databases

SMRiQ07833
ModBaseiSearch...

Protein-protein interaction databases

IntActiQ07833, 1 interactor
STRINGi224308.BSU39230

Proteomic databases

jPOSTiQ07833
PaxDbiQ07833
PRIDEiQ07833

Genome annotation databases

EnsemblBacteriaiCAB15959; CAB15959; BSU_39230
GeneIDi937525
KEGGibsu:BSU39230
PATRICifig|224308.179.peg.4247

Phylogenomic databases

eggNOGiCOG3209, Bacteria
InParanoidiQ07833
OMAiGKKIWPT

Enzyme and pathway databases

BioCyciBSUB:BSU39230-MONOMER

Family and domain databases

Gene3Di2.60.120.260, 2 hits
InterProiView protein in InterPro
IPR008979, Galactose-bd-like_sf
IPR022385, Rhs_assc_core
IPR031325, RHS_repeat
IPR006530, YD
PfamiView protein in Pfam
PF05593, RHS_repeat, 4 hits
SUPFAMiSSF49785, SSF49785, 1 hit
TIGRFAMsiTIGR03696, Rhs_assc_core, 1 hit
TIGR01643, YD_repeat_2x, 5 hits

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiWAPA_BACSU
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q07833
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: July 28, 2009
Last modified: June 2, 2021
This is version 134 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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