UniProtKB - Q07717 (B2MG_PIG)
Protein
Beta-2-microglobulin
Gene
B2M
Organism
Sus scrofa (Pig)
Status
Functioni
Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).By similarity
GO - Biological processi
- antigen processing and presentation of peptide antigen via MHC class I Source: UniProtKB-KW
- immune response Source: InterPro
Keywordsi
Biological process | Immunity |
Enzyme and pathway databases
Reactomei | R-SSC-1236974, ER-Phagosome pathway R-SSC-1236977, Endosomal/Vacuolar pathway R-SSC-198933, Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell R-SSC-2172127, DAP12 interactions R-SSC-2424491, DAP12 signaling R-SSC-6798695, Neutrophil degranulation R-SSC-983170, Antigen Presentation: Folding, assembly and peptide loading of class I MHC |
Names & Taxonomyi
Protein namesi | Recommended name: Beta-2-microglobulinAlternative name(s): Lactollin |
Gene namesi | Name:B2M |
Organismi | Sus scrofa (Pig) |
Taxonomic identifieri | 9823 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Artiodactyla › Suina › Suidae › Sus |
Proteomesi |
|
Subcellular locationi
Extracellular region or secreted
- Secreted By similarity
Extracellular region or secreted
- extracellular region Source: UniProtKB-SubCell
Plasma Membrane
- MHC class I protein complex Source: UniProtKB-KW
Keywords - Cellular componenti
MHC I, SecretedPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 20 | By similarityAdd BLAST | 20 | |
ChainiPRO_0000018787 | 21 – 118 | Beta-2-microglobulinAdd BLAST | 98 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Disulfide bondi | 45 ↔ 99 | PROSITE-ProRule annotation |
Keywords - PTMi
Disulfide bondProteomic databases
PaxDbi | Q07717 |
PeptideAtlasi | Q07717 |
PRIDEi | Q07717 |
Expressioni
Gene expression databases
Bgeei | ENSSSCG00000004682, Expressed in lung and 37 other tissues |
ExpressionAtlasi | Q07717, baseline and differential |
Genevisiblei | Q07717, SS |
Interactioni
Subunit structurei
Heterodimer of an alpha chain and a beta chain. Beta-2-microglobulin is the beta-chain of major histocompatibility complex class I molecules (By similarity).
By similarityProtein-protein interaction databases
STRINGi | 9823.ENSSSCP00000005050 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q07717 |
ModBasei | Search... |
PDBe-KBi | Search... |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 25 – 112 | Ig-like C1-typeAdd BLAST | 88 |
Sequence similaritiesi
Belongs to the beta-2-microglobulin family.Curated
Keywords - Domaini
Immunoglobulin domain, SignalPhylogenomic databases
eggNOGi | ENOG502S8GM, Eukaryota |
GeneTreei | ENSGT00690000102227 |
HOGENOMi | CLU_163066_0_0_1 |
InParanoidi | Q07717 |
OMAi | FHPPKID |
OrthoDBi | 1556447at2759 |
TreeFami | TF334167 |
Family and domain databases
CDDi | cd05770, IgC_beta2m, 1 hit |
Gene3Di | 2.60.40.10, 1 hit |
InterProi | View protein in InterPro IPR015707, B2Microglobulin IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003006, Ig/MHC_CS IPR003597, Ig_C1-set |
PANTHERi | PTHR19944:SF62, PTHR19944:SF62, 1 hit |
Pfami | View protein in Pfam PF07654, C1-set, 1 hit |
SMARTi | View protein in SMART SM00407, IGc1, 1 hit |
SUPFAMi | SSF48726, SSF48726, 1 hit |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 1 hit PS00290, IG_MHC, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All
Q07717-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAPLVALVLL GLLSLSGLDA VARPPKVQVY SRHPAENGKP NYLNCYVSGF
60 70 80 90 100
HPPQIEIDLL KNGEKMNAEQ SDLSFSKDWS FYLLVHTEFT PNAVDQYSCR
110
VKHVTLDKPK IVKWDRDH
Computationally mapped potential isoform sequencesi
There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A5S6I1G3 | A0A5S6I1G3_PIG | Beta-2-microglobulin | B2M | 157 | Annotation score: | ||
A0A287B7B9 | A0A287B7B9_PIG | Beta-2-microglobulin | B2M | 140 | Annotation score: | ||
A0A287BEM9 | A0A287BEM9_PIG | Beta-2-microglobulin | B2M | 152 | Annotation score: | ||
A0A5S6FYV9 | A0A5S6FYV9_PIG | Beta-2-microglobulin | B2M | 119 | Annotation score: | ||
A0A5G2QVI0 | A0A5G2QVI0_PIG | Beta-2-microglobulin | B2M | 111 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 70 | Q → S in CAA23304 (PubMed:8672129).Curated | 1 | |
Sequence conflicti | 85 | V → A in AAL48289 (Ref. 3) Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | L13854 mRNA Translation: AAA16252.1 F14868 mRNA Translation: CAA23304.1 AF452448 Genomic DNA Translation: AAL48289.1 |
PIRi | I46609 |
RefSeqi | NP_999143.1, NM_213978.1 XP_013848513.1, XM_013993059.1 XP_013848514.1, XM_013993060.1 |
Genome annotation databases
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | L13854 mRNA Translation: AAA16252.1 F14868 mRNA Translation: CAA23304.1 AF452448 Genomic DNA Translation: AAL48289.1 |
PIRi | I46609 |
RefSeqi | NP_999143.1, NM_213978.1 XP_013848513.1, XM_013993059.1 XP_013848514.1, XM_013993060.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
3QQ3 | X-ray | 2.59 | B/E | 21-118 | [»] | |
3QQ4 | X-ray | 2.10 | B | 21-118 | [»] | |
5H94 | X-ray | 1.48 | B/E | 21-118 | [»] | |
5NPZ | X-ray | 1.43 | B | 21-118 | [»] | |
5NQ0 | X-ray | 1.10 | B | 21-118 | [»] | |
5NQ2 | X-ray | 1.54 | B | 21-118 | [»] | |
5YLX | X-ray | 2.20 | B | 21-118 | [»] | |
6A6H | X-ray | 2.31 | B | 21-118 | [»] | |
6KWK | X-ray | 2.50 | B | 21-118 | [»] | |
6KWL | X-ray | 1.80 | B | 21-118 | [»] | |
6KWN | X-ray | 2.40 | B | 21-118 | [»] | |
6KWO | X-ray | 1.80 | B | 22-118 | [»] | |
SMRi | Q07717 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 9823.ENSSSCP00000005050 |
Proteomic databases
PaxDbi | Q07717 |
PeptideAtlasi | Q07717 |
PRIDEi | Q07717 |
Genome annotation databases
Organism-specific databases
CTDi | 567 |
Phylogenomic databases
eggNOGi | ENOG502S8GM, Eukaryota |
GeneTreei | ENSGT00690000102227 |
HOGENOMi | CLU_163066_0_0_1 |
InParanoidi | Q07717 |
OMAi | FHPPKID |
OrthoDBi | 1556447at2759 |
TreeFami | TF334167 |
Enzyme and pathway databases
Reactomei | R-SSC-1236974, ER-Phagosome pathway R-SSC-1236977, Endosomal/Vacuolar pathway R-SSC-198933, Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell R-SSC-2172127, DAP12 interactions R-SSC-2424491, DAP12 signaling R-SSC-6798695, Neutrophil degranulation R-SSC-983170, Antigen Presentation: Folding, assembly and peptide loading of class I MHC |
Gene expression databases
Bgeei | ENSSSCG00000004682, Expressed in lung and 37 other tissues |
ExpressionAtlasi | Q07717, baseline and differential |
Genevisiblei | Q07717, SS |
Family and domain databases
CDDi | cd05770, IgC_beta2m, 1 hit |
Gene3Di | 2.60.40.10, 1 hit |
InterProi | View protein in InterPro IPR015707, B2Microglobulin IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003006, Ig/MHC_CS IPR003597, Ig_C1-set |
PANTHERi | PTHR19944:SF62, PTHR19944:SF62, 1 hit |
Pfami | View protein in Pfam PF07654, C1-set, 1 hit |
SMARTi | View protein in SMART SM00407, IGc1, 1 hit |
SUPFAMi | SSF48726, SSF48726, 1 hit |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 1 hit PS00290, IG_MHC, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | B2MG_PIG | |
Accessioni | Q07717Primary (citable) accession number: Q07717 Secondary accession number(s): Q8WN08 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1995 |
Last sequence update: | November 1, 1995 | |
Last modified: | December 2, 2020 | |
This is version 136 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families