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Protein

Drebrin

Gene

Dbn1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Required for actin polymerization at immunological synapses (IS) and for CXCR4 recruitment to IS (By similarity). Drebrins might play some role in cell migration, extension of neuronal processes and plasticity of dendrites.By similarity

Miscellaneous

Drebrins are classified into two forms of the embryonic type (E1 and E2) and one form of the adult type (A). The time course of their appearance are different from each other. Their structures are closely related. Adult rat brain expresses only drebrin A while drebrin E1 or E2 is observed in immature animals.

GO - Molecular functioni

  • actin filament binding Source: RGD
  • cytoskeletal protein binding Source: RGD
  • profilin binding Source: UniProtKB

GO - Biological processi

Keywordsi

Molecular functionActin-binding, Developmental protein
Biological processDifferentiation, Neurogenesis

Names & Taxonomyi

Protein namesi
Recommended name:
Drebrin
Alternative name(s):
Developmentally-regulated brain protein
Gene namesi
Name:Dbn1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 17

Organism-specific databases

RGDi70885 Dbn1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell junction, Cell projection, Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00000800102 – 707DrebrinAdd BLAST706

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1
Modified residuei141PhosphoserineBy similarity1
Modified residuei142PhosphoserineCombined sources1
Modified residuei241PhosphoserineBy similarity1
Modified residuei342PhosphoserineCombined sources1
Modified residuei377PhosphothreonineBy similarity1
Modified residuei381PhosphothreonineBy similarity1
Modified residuei383PhosphoserineBy similarity1
Modified residuei385PhosphoserineCombined sources1
Modified residuei391PhosphoserineBy similarity1
Modified residuei392PhosphothreonineBy similarity1
Modified residuei467PhosphoserineBy similarity1
Modified residuei549PhosphothreonineBy similarity1
Modified residuei659PhosphoserineBy similarity1

Post-translational modificationi

ISGylated.By similarity

Keywords - PTMi

Acetylation, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiQ07266
PRIDEiQ07266

PTM databases

iPTMnetiQ07266
PhosphoSitePlusiQ07266
SwissPalmiQ07266

Expressioni

Tissue specificityi

Brain neurons.

Gene expression databases

BgeeiENSRNOG00000014170 Expressed in 10 organ(s), highest expression level in brain
ExpressionAtlasiQ07266 baseline and differential
GenevisibleiQ07266 RN

Interactioni

Subunit structurei

Interacts with RUFY3. Binds F-actin. Interacts with CXCR4; this interaction is enhanced by antigenic stimulation.By similarity

Binary interactionsi

GO - Molecular functioni

Protein-protein interaction databases

BioGridi249553, 2 interactors
IntActiQ07266, 4 interactors
STRINGi10116.ENSRNOP00000019569

Structurei

3D structure databases

ProteinModelPortaliQ07266
SMRiQ07266
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 134ADF-HPROSITE-ProRule annotationAdd BLAST132

Phylogenomic databases

eggNOGiENOG410IP00 Eukaryota
ENOG410YAV7 LUCA
GeneTreeiENSGT00530000062953
HOGENOMiHOG000015304
HOVERGENiHBG000823
InParanoidiQ07266
OrthoDBiEOG091G05KP
PhylomeDBiQ07266
TreeFamiTF318935

Family and domain databases

Gene3Di3.40.20.10, 1 hit
InterProiView protein in InterPro
IPR002108 ADF-H
IPR029006 ADF-H/Gelsolin-like_dom_sf
IPR028438 Drebrin
PANTHERiPTHR10829:SF1 PTHR10829:SF1, 1 hit
PfamiView protein in Pfam
PF00241 Cofilin_ADF, 1 hit
SMARTiView protein in SMART
SM00102 ADF, 1 hit
PROSITEiView protein in PROSITE
PS51263 ADF_H, 1 hit

Sequences (3+)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform A (identifier: Q07266-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAGVSFSGHR LELLAAYEEV IREESAADWA LYTYEDGSDD LKLAASGEGG
60 70 80 90 100
LQELSGHFEN QKVMYGFCSV KDSQAALPKY VLINWVGEDV PDARKCACAS
110 120 130 140 150
HVAKVAEFFQ GVDVIVNASS VEDIDAGAIG QRLSNGLARL SSPVLHRLRL
160 170 180 190 200
REDENAEPVG TTYQKTDAAV EMKRINREQF WEQAKKEEEL RKEEERKKAL
210 220 230 240 250
DARLRFEQER MEQERQEQEE RERRYREREQ QIEEHRRKQQ SLEAEEAKRR
260 270 280 290 300
LKDQSIFGDQ RDEEEESQMK KSESEVEEAA AIIAQRPDNP REFFRQQERV
310 320 330 340 350
ASASGGSCDA PSPFNHRPGR PYCPFIKASD SGPSSSSSSS SSPPRTPFPY
360 370 380 390 400
ITCHRTPNLS SSLPCSHLDS HRRMAPTPIP TRSPSDSSTA STPITEQIER
410 420 430 440 450
ALDEVTSSQP PPPPPPPPPA QEAQESAPRL DGEEVCKEAK VAAAPQVWAG
460 470 480 490 500
CAEEPPRAQE PPLLQSSPTE DLMCTESPEQ AVLAASPEPD ASVTSVADAH
510 520 530 540 550
AADTIETTTA TTATTIADNV TPAAASLIDL WPGNGEEAST PQAEPRVPTP
560 570 580 590 600
PSGAEASLAE VPLLNEAAQE PLPPVGEGCA NLLNFDELPE PPATFCDPEE
610 620 630 640 650
EAEGEPLAAS QVLTMPSALE EVDQVLEQEL EPEPHLLTNG ETTQKEGTQQ
660 670 680 690 700
ASEGYFSQSQ EEEFAQSEEP CAKAPPPVFY NKPPEIDITC WDADPVPEEE

EGFEGGD
Length:707
Mass (Da):77,472
Last modified:January 23, 2007 - v3
Checksum:iB5279BF6EB7B80AA
GO
Isoform E1 (identifier: Q07266-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     320-365: Missing.

Show »
Length:661
Mass (Da):72,602
Checksum:i0DE7B54E44D2ADFB
GO
Isoform E2 (identifier: Q07266-3)
Sequence is not available
Length:
Mass (Da):

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0H2UHL9A0A0H2UHL9_RAT
Drebrin
Dbn1 rCG_24168
706Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti387S → P in BAA28746 (Ref. 2) Curated1
Sequence conflicti588L → R in BAA28746 (Ref. 2) Curated1
Sequence conflicti618A → V in BAA28746 (Ref. 2) Curated1
Sequence conflicti650Missing in AAI39848 (PubMed:15489334).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_004201320 – 365Missing in isoform E1. 2 PublicationsAdd BLAST46

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X59267 mRNA Translation: CAA41957.1
AB015042 mRNA Translation: BAA28746.1
BC139847 mRNA Translation: AAI39848.1
PIRiS60588
RefSeqiNP_112286.1, NM_031024.1 [Q07266-1]
XP_006253719.1, XM_006253657.3
UniGeneiRn.11247

Genome annotation databases

EnsembliENSRNOT00000019393; ENSRNOP00000019393; ENSRNOG00000014170 [Q07266-2]
GeneIDi81653
KEGGirno:81653
UCSCiRGD:70885 rat [Q07266-1]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X59267 mRNA Translation: CAA41957.1
AB015042 mRNA Translation: BAA28746.1
BC139847 mRNA Translation: AAI39848.1
PIRiS60588
RefSeqiNP_112286.1, NM_031024.1 [Q07266-1]
XP_006253719.1, XM_006253657.3
UniGeneiRn.11247

3D structure databases

ProteinModelPortaliQ07266
SMRiQ07266
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi249553, 2 interactors
IntActiQ07266, 4 interactors
STRINGi10116.ENSRNOP00000019569

PTM databases

iPTMnetiQ07266
PhosphoSitePlusiQ07266
SwissPalmiQ07266

Proteomic databases

PaxDbiQ07266
PRIDEiQ07266

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000019393; ENSRNOP00000019393; ENSRNOG00000014170 [Q07266-2]
GeneIDi81653
KEGGirno:81653
UCSCiRGD:70885 rat [Q07266-1]

Organism-specific databases

CTDi1627
RGDi70885 Dbn1

Phylogenomic databases

eggNOGiENOG410IP00 Eukaryota
ENOG410YAV7 LUCA
GeneTreeiENSGT00530000062953
HOGENOMiHOG000015304
HOVERGENiHBG000823
InParanoidiQ07266
OrthoDBiEOG091G05KP
PhylomeDBiQ07266
TreeFamiTF318935

Miscellaneous databases

PROiPR:Q07266

Gene expression databases

BgeeiENSRNOG00000014170 Expressed in 10 organ(s), highest expression level in brain
ExpressionAtlasiQ07266 baseline and differential
GenevisibleiQ07266 RN

Family and domain databases

Gene3Di3.40.20.10, 1 hit
InterProiView protein in InterPro
IPR002108 ADF-H
IPR029006 ADF-H/Gelsolin-like_dom_sf
IPR028438 Drebrin
PANTHERiPTHR10829:SF1 PTHR10829:SF1, 1 hit
PfamiView protein in Pfam
PF00241 Cofilin_ADF, 1 hit
SMARTiView protein in SMART
SM00102 ADF, 1 hit
PROSITEiView protein in PROSITE
PS51263 ADF_H, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiDREB_RAT
AccessioniPrimary (citable) accession number: Q07266
Secondary accession number(s): A5D6R1, O70205
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: January 23, 2007
Last modified: November 7, 2018
This is version 130 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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