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Protein

Glycine-rich RNA-binding protein 10

Gene

GRP10

Organism
Brassica napus (Rape)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Possibly has a role in RNA transcription or processing during stress.

GO - Molecular functioni

Keywordsi

Molecular functionRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Glycine-rich RNA-binding protein 10
Gene namesi
Name:GRP10
OrganismiBrassica napus (Rape)
Taxonomic identifieri3708 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000816011 – 169Glycine-rich RNA-binding protein 10Add BLAST169

Expressioni

Tissue specificityi

Expressed only in roots and stems.

Structurei

3D structure databases

ProteinModelPortaliQ05966
SMRiQ05966
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 84RRMPROSITE-ProRule annotationAdd BLAST79

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi86 – 169Gly-richAdd BLAST84

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

Q05966-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSEVEYRCFV GGLAWATGDA ELERTFSQFG EVIDSKIIND RETGRSRGFG
60 70 80 90 100
FVTFKDEKSM KDAIDEMNGK ELDGRTITVN EAQSRGGGGG GGRGGGGYGG
110 120 130 140 150
RGGGGYGGGG GGYGDRRGGG GYGSGGGGRG GGGYGSGGGG YGGGGGRRDG
160
GGYGGGDGGY GGGSGGGGW
Length:169
Mass (Da):16,304
Last modified:June 1, 1994 - v1
Checksum:i62D666B61A858AB1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z14143 Genomic DNA Translation: CAA78513.1
PIRiS38331
RefSeqiXP_013735705.1, XM_013880251.1
XP_013735737.1, XM_013880283.1

Genome annotation databases

GeneIDi106438942
106438956
KEGGibna:106438942
bna:106438956

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z14143 Genomic DNA Translation: CAA78513.1
PIRiS38331
RefSeqiXP_013735705.1, XM_013880251.1
XP_013735737.1, XM_013880283.1

3D structure databases

ProteinModelPortaliQ05966
SMRiQ05966
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106438942
106438956
KEGGibna:106438942
bna:106438956

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiGRP10_BRANA
AccessioniPrimary (citable) accession number: Q05966
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: October 10, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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