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Protein

GTP-binding protein YPTM2

Gene

YPTM2

Organism
Zea mays (Maize)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Protein transport. Probably involved in vesicular traffic (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi15 – 23GTPBy similarity9
Nucleotide bindingi33 – 40GTPBy similarity8
Nucleotide bindingi63 – 67GTPBy similarity5
Nucleotide bindingi121 – 124GTPBy similarity4
Nucleotide bindingi151 – 153GTPBy similarity3

GO - Molecular functioni

  • GTPase activity Source: GO_Central
  • GTP binding Source: UniProtKB-KW

GO - Biological processi

Keywordsi

Biological processProtein transport, Transport
LigandGTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
GTP-binding protein YPTM2
Gene namesi
Name:YPTM2
OrganismiZea mays (Maize)
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Unplaced

Organism-specific databases

MaizeGDBi78605

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001212981 – 203GTP-binding protein YPTM2Add BLAST203

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi200S-geranylgeranyl cysteineBy similarity1
Lipidationi201S-geranylgeranyl cysteineBy similarity1

Keywords - PTMi

Lipoprotein, Prenylation

Proteomic databases

PaxDbiQ05737
PRIDEiQ05737

Expressioni

Tissue specificityi

Its expression is weak in stems, higher in roots, leaves and coleoptiles, but highest in flowers.

Gene expression databases

ExpressionAtlasiQ05737 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi4577.GRMZM2G097728_P02

Structurei

3D structure databases

ProteinModelPortaliQ05737
SMRiQ05737
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi37 – 45Effector regionCurated9

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiKOG0084 Eukaryota
ENOG410XQN5 LUCA
HOGENOMiHOG000233968
KOiK07874

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit

Sequencei

Sequence statusi: Complete.

Q05737-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV
60 70 80 90 100
EQDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIIVYDV TDQESFNNVK
110 120 130 140 150
QWLNEIDRYA SDNVNKLLVG NKSDLTANKV VATETAKAFA DEMGIPFMET
160 170 180 190 200
SAKNATNVQQ AFMAMAASIK DRMASQPAAA NARPATVQIR GQPVNQKTSC

CSS
Length:203
Mass (Da):22,475
Last modified:February 1, 1994 - v1
Checksum:iE241326E7ACD1B8A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X63278 mRNA Translation: CAA44919.1
PIRiB38202
RefSeqiNP_001105441.1, NM_001111971.1
UniGeneiZm.96520

Genome annotation databases

GeneIDi542396
KEGGizma:542396

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X63278 mRNA Translation: CAA44919.1
PIRiB38202
RefSeqiNP_001105441.1, NM_001111971.1
UniGeneiZm.96520

3D structure databases

ProteinModelPortaliQ05737
SMRiQ05737
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4577.GRMZM2G097728_P02

Proteomic databases

PaxDbiQ05737
PRIDEiQ05737

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi542396
KEGGizma:542396

Organism-specific databases

MaizeGDBi78605

Phylogenomic databases

eggNOGiKOG0084 Eukaryota
ENOG410XQN5 LUCA
HOGENOMiHOG000233968
KOiK07874

Gene expression databases

ExpressionAtlasiQ05737 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiYPTM2_MAIZE
AccessioniPrimary (citable) accession number: Q05737
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: November 7, 2018
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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