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UniProtKB - Q05516 (ZBT16_HUMAN)

Entry version 218 (12 Aug 2020)
Sequence version 2 (07 Mar 2006)
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Protein

Zinc finger and BTB domain-containing protein 16

Gene

ZBTB16

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Acts as a transcriptional repressor (PubMed:24359566). May play a role in myeloid maturation and in the development and/or maintenance of other differentiated tissues. Probable substrate-recognition component of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:14528312).2 Publications

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section describes the metabolic pathway(s) associated with a protein.<p><a href='/help/pathway' target='_top'>More...</a></p>Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri404 – 426C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri432 – 454C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri461 – 483C2H2-type 3PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri490 – 512C2H2-type 4PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri518 – 540C2H2-type 5PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri546 – 568C2H2-type 6PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri574 – 596C2H2-type 7PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri602 – 624C2H2-type 8PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri630 – 652C2H2-type 9PROSITE-ProRule annotationAdd BLAST23

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-binding, Repressor
Biological processTranscription, Transcription regulation, Ubl conjugation pathway
LigandMetal-binding, Zinc

Enzyme and pathway databases

Pathway Commons web resource for biological pathway data

More...PathwayCommonsi		Q05516

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-HSA-8951664, Neddylation
R-HSA-983168, Antigen processing: Ubiquitination & Proteasome degradation

SignaLink: a signaling pathway resource with multi-layered regulatory networks

More...SignaLinki		Q05516

SIGNOR Signaling Network Open Resource

More...SIGNORi		Q05516

UniPathway: a resource for the exploration and annotation of metabolic pathways

More...UniPathwayi		UPA00143

Protein family/group databases

MoonDB Database of extreme multifunctional and moonlighting proteins

More...MoonDBi		Q05516, Predicted

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Zinc finger and BTB domain-containing protein 16
Alternative name(s):
Promyelocytic leukemia zinc finger protein
Zinc finger protein 145
Zinc finger protein PLZF
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ZBTB16
Synonyms:PLZF, ZNF145
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 11

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...EuPathDBi		HostDB:ENSG00000109906.13

Human Gene Nomenclature Database

More...HGNCi		HGNC:12930, ZBTB16

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		176797, gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q05516

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section provides information on the disease(s) associated with genetic variations in a given protein. The information is extracted from the scientific literature and diseases that are also described in the <a href="http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim">OMIM</a> database are represented with a <a href="http://www.uniprot.org/diseases">controlled vocabulary</a> in the following way:<p><a href='/help/involvement_in_disease' target='_top'>More...</a></p>Involvement in diseasei

Skeletal defects, genital hypoplasia, and mental retardation (SGYMR)1 Publication
The disease is caused by mutations affecting the gene represented in this entry.
Disease descriptionA disorder characterized by mental retardation, craniofacial dysmorphism, microcephaly and short stature. Additional features include absence of the thumbs, hypoplasia of the radii and ulnae, additional vertebrae and ribs, retarded bone age and genital hypoplasia.
Related information in OMIM
Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_054912617M → V in SGYMR. 1 PublicationCorresponds to variant dbSNP:rs121434606EnsemblClinVar.1
A chromosomal aberration involving ZBTB16 may be a cause of acute promyelocytic leukemia (APL). Translocation t(11;17)(q32;q21) with RARA.1 Publication

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection describes interesting single amino acid sites on the sequence that are not defined in any other subsection. This subsection can be displayed in different sections ('Function', 'PTM / Processing', 'Pathology and Biotech') according to its content.<p><a href='/help/site' target='_top'>More...</a></p>Sitei394 – 395Breakpoint for translocation to form PLZF-RAR-alpha oncogene2

Keywords - Diseasei

Disease mutation, Mental retardation, Proto-oncogene

Organism-specific databases

DisGeNET

More...DisGeNETi		7704

MalaCards human disease database

More...MalaCardsi		ZBTB16
MIMi612447, phenotype

Open Targets

More...OpenTargetsi		ENSG00000109906

Orphanet; a database dedicated to information on rare diseases and orphan drugs

More...Orphaneti		520, Acute promyelocytic leukemia
99861, Precursor T-cell acute lymphoblastic leukemia

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA37517

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...Pharosi		Q05516, Tbio

Chemistry databases

ChEMBL database of bioactive drug-like small molecules

More...ChEMBLi		CHEMBL4105726

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		ZBTB16

Domain mapping of disease mutations (DMDM)

More...DMDMi		90109930

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000477291 – 673Zinc finger and BTB domain-containing protein 16Add BLAST673

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei76Phosphoserine; by PDPK1Sequence analysis1
Modified residuei184Phosphoserine; by PDPK1Sequence analysis1
Modified residuei197Phosphoserine; by PDPK1Sequence analysis1
Modified residuei256Phosphoserine; by PDPK1Sequence analysis1
Modified residuei282Phosphothreonine; by PDPK1Sequence analysis1
Modified residuei628Phosphoserine; by PDPK1Sequence analysis1

Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		Q05516

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...MassIVEi		Q05516

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q05516

PeptideAtlas

More...PeptideAtlasi		Q05516

PRoteomics IDEntifications database

More...PRIDEi		Q05516

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		58332 [Q05516-1]
58333 [Q05516-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q05516

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q05516

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Within the hematopoietic system, PLZF is expressed in bone marrow, early myeloid cell lines and peripheral blood mononuclear cells. Also expressed in the ovary, and at lower levels, in the kidney and lung.

<p>This subsection of the 'Expression' section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

By retinoic acid.

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000109906, Expressed in upper lobe of lung and 235 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q05516, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q05516, HS

Organism-specific databases

Human Protein Atlas

More...HPAi		ENSG00000109906, Low tissue specificity

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Binds EPN1 (PubMed:11161217).

Interacts with ZBTB32 and CUL3 (PubMed:10572087, PubMed:14528312).

Interacts with ATP7B (PubMed:16676348).

Interacts (via C2H2-type zinc finger domains 1 and 2) with RNF112 (PubMed:24359566).

5 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Q05516
With#Exp.IntAct
AMOTL2 [Q9Y2J4]3EBI-711925,EBI-746752
BLZF1 [Q9H2G9]3EBI-711925,EBI-2548012
CARD9 - isoform 2 [Q9H257-2]3EBI-711925,EBI-11530605
CCHCR1 - isoform 3 [Q8TD31-3]3EBI-711925,EBI-10175300
CEP70 [Q8NHQ1]4EBI-711925,EBI-739624
COG6 [Q9Y2V7]5EBI-711925,EBI-3866319
CTDSP1 [Q9GZU7]3EBI-711925,EBI-751587
EEF1A1 [P68104]4EBI-711925,EBI-352162
EFHC2 [Q5JST6]3EBI-711925,EBI-2349927
FAM217B [Q9NTX9]3EBI-711925,EBI-19153639
FAM90A1 [Q86YD7]3EBI-711925,EBI-6658203
FHL5 [Q5TD97]3EBI-711925,EBI-750641
GOLGA2 [Q08379]8EBI-711925,EBI-618309
GOLGA6L9 [A6NEM1]3EBI-711925,EBI-5916454
GPANK1 [O95872]3EBI-711925,EBI-751540
HOXA1 [P49639]3EBI-711925,EBI-740785
HOXC5 [Q00444]3EBI-711925,EBI-11955357
HSF2BP [O75031]3EBI-711925,EBI-7116203
IL6 [P05231]2EBI-711925,EBI-720533
KIFC3 - isoform 4 [Q9BVG8-5]3EBI-711925,EBI-14069005
KRT40 [Q6A162]9EBI-711925,EBI-10171697
LAMTOR5 [A0A0C4DGV4]6EBI-711925,EBI-10173304
LDOC1 [O95751]4EBI-711925,EBI-740738
MEOX2 [Q6FHY5]3EBI-711925,EBI-16439278
MID2 - isoform 2 [Q9UJV3-2]3EBI-711925,EBI-10172526
MTUS2 - isoform 2 [Q5JR59-3]3EBI-711925,EBI-11522433
MYLIP [Q8WY64]3EBI-711925,EBI-6952711
NFKBID [Q8NI38]3EBI-711925,EBI-10271199
NME4 [O00746]3EBI-711925,EBI-744871
OSBPL3 [Q9H4L5]3EBI-711925,EBI-1051317
PHF1 [O43189]3EBI-711925,EBI-530034
PIAS2 - isoform PIAS2-alpha [O75928-2]3EBI-711925,EBI-348567
PIBF1 [Q4G0R1]3EBI-711925,EBI-14066006
PML [P29590]7EBI-711925,EBI-295890
PML - isoform PML-4 [P29590-5]2EBI-711925,EBI-304008
PRKAR1B [P31321]3EBI-711925,EBI-2805516
RAB3IP - isoform 7 [Q96QF0-7]3EBI-711925,EBI-11984839
REL - isoform 2 [Q04864-2]3EBI-711925,EBI-10829018
RINT1 [Q6NUQ1]3EBI-711925,EBI-726876
SH2D4A - isoform 2 [Q9H788-2]3EBI-711925,EBI-10308083
TAB2 [Q9NYJ8]3EBI-711925,EBI-358708
TLE5 - isoform 2 [Q08117-2]3EBI-711925,EBI-11741437
TRAF1 [Q13077]5EBI-711925,EBI-359224
TRAF2 [Q12933]5EBI-711925,EBI-355744
TRAF4 [Q9BUZ4]3EBI-711925,EBI-3650647
TRIM21 [P19474]3EBI-711925,EBI-81290
TRIM23 [P36406]3EBI-711925,EBI-740098
TRIM27 [P14373]5EBI-711925,EBI-719493
TRIM54 [Q9BYV2]6EBI-711925,EBI-2130429
TTC23 - isoform 3 [Q5W5X9-3]3EBI-711925,EBI-9090990
UBE2I [Q7KZS0]3EBI-711925,EBI-10180829
VTA1 [Q9NP79]4EBI-711925,EBI-740160
itself8EBI-711925,EBI-711925
ZBTB42 [B2RXF5]3EBI-711925,EBI-12287587
ZNF552 [Q9H707]3EBI-711925,EBI-2555731
ZNF620 [Q6ZNG0]3EBI-711925,EBI-4395669
ZNF655 [Q8N720]3EBI-711925,EBI-625509
Gne [O35826] from Rattus norvegicus.2EBI-711925,EBI-7109445
Hoxa1 [P09022] from Mus musculus.3EBI-711925,EBI-3957603

GO - Molecular functioni

Complete GO annotation on QuickGO ...

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		113498, 129 interactors

Database of interacting proteins

More...DIPi		DIP-2654N

Protein interaction database and analysis system

More...IntActi		Q05516, 120 interactors

Molecular INTeraction database

More...MINTi		Q05516

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000338157

Chemistry databases

BindingDB database of measured binding affinities

More...BindingDBi		Q05516

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q05516, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1673
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q05516

Database of comparative protein structure models

More...ModBasei		Search...

Protein Data Bank in Europe - Knowledge Base

More...PDBe-KBi		Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...EvolutionaryTracei		Q05516

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini34 – 96BTBPROSITE-ProRule annotationAdd BLAST63

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the krueppel C2H2-type zinc-finger protein family.Curated

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri404 – 426C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri432 – 454C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri461 – 483C2H2-type 3PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri490 – 512C2H2-type 4PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri518 – 540C2H2-type 5PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri546 – 568C2H2-type 6PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri574 – 596C2H2-type 7PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri602 – 624C2H2-type 8PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri630 – 652C2H2-type 9PROSITE-ProRule annotationAdd BLAST23

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG1721, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00940000154616

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_026420_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q05516

KEGG Orthology (KO)

More...KOi		K10055

Identification of Orthologs from Complete Genome Data

More...OMAi		MGLIQLQ

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q05516

TreeFam database of animal gene trees

More...TreeFami		TF350825

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR000210, BTB/POZ_dom
IPR011333, SKP1/BTB/POZ_sf
IPR036236, Znf_C2H2_sf
IPR013087, Znf_C2H2_type

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00651, BTB, 1 hit
PF00096, zf-C2H2, 3 hits

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00225, BTB, 1 hit
SM00355, ZnF_C2H2, 9 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF54695, SSF54695, 1 hit
SSF57667, SSF57667, 4 hits

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50097, BTB, 1 hit
PS00028, ZINC_FINGER_C2H2_1, 8 hits
PS50157, ZINC_FINGER_C2H2_2, 9 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All

Isoform PLZFB (identifier: Q05516-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MDLTKMGMIQ LQNPSHPTGL LCKANQMRLA GTLCDVVIMV DSQEFHAHRT 
        60         70         80         90        100
VLACTSKMFE ILFHRNSQHY TLDFLSPKTF QQILEYAYTA TLQAKAEDLD 
       110        120        130        140        150
DLLYAAEILE IEYLEEQCLK MLETIQASDD NDTEATMADG GAEEEEDRKA 
       160        170        180        190        200
RYLKNIFISK HSSEESGYAS VAGQSLPGPM VDQSPSVSTS FGLSAMSPTK 
       210        220        230        240        250
AAVDSLMTIG QSLLQGTLQP PAGPEEPTLA GGGRHPGVAE VKTEMMQVDE 
       260        270        280        290        300
VPSQDSPGAA ESSISGGMGD KVEERGKEGP GTPTRSSVIT SARELHYGRE 
       310        320        330        340        350
ESAEQVPPPA EAGQAPTGRP EHPAPPPEKH LGIYSVLPNH KADAVLSMPS 
       360        370        380        390        400
SVTSGLHVQP ALAVSMDFST YGGLLPQGFI QRELFSKLGE LAVGMKSESR 
       410        420        430        440        450
TIGEQCSVCG VELPDNEAVE QHRKLHSGMK TYGCELCGKR FLDSLRLRMH 
       460        470        480        490        500
LLAHSAGAKA FVCDQCGAQF SKEDALETHR QTHTGTDMAV FCLLCGKRFQ 
       510        520        530        540        550
AQSALQQHME VHAGVRSYIC SECNRTFPSH TALKRHLRSH TGDHPYECEF 
       560        570        580        590        600
CGSCFRDEST LKSHKRIHTG EKPYECNGCG KKFSLKHQLE THYRVHTGEK 
       610        620        630        640        650
PFECKLCHQR SRDYSAMIKH LRTHNGASPY QCTICTEYCP SLSSMQKHMK 
       660        670 
GHKPEEIPPD WRIEKTYLYL CYV
Length:673
Mass (Da):74,274
Last modified:March 7, 2006 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i51F8E361FA31239E
GO
Isoform PLZFA (identifier: Q05516-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     255-377: Missing.

Show »
Length:550
Mass (Da):61,601
Checksum:i1051E16C91FDC089
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F5H6C3F5H6C3_HUMAN
Zinc finger and BTB domain-containi...
ZBTB16
115Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F5H5Y7F5H5Y7_HUMAN
Zinc finger and BTB domain-containi...
ZBTB16
148Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H0YGW2H0YGW2_HUMAN
Zinc finger and BTB domain-containi...
ZBTB16
55Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti580G → D in CAA79489 (PubMed:8384553).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_054912617M → V in SGYMR. 1 PublicationCorresponds to variant dbSNP:rs121434606EnsemblClinVar.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_006896255 – 377Missing in isoform PLZFA. CuratedAdd BLAST123

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
Z19002 mRNA Translation: CAA79489.1
AF060568 Genomic DNA Translation: AAD03619.1
BC026902 mRNA Translation: AAH26902.1
BC029812 mRNA Translation: AAH29812.1
S60093 Genomic DNA Translation: AAC60590.2

The Consensus CDS (CCDS) project

More...CCDSi		CCDS8367.1 [Q05516-1]

Protein sequence database of the Protein Information Resource

More...PIRi		S36336

NCBI Reference Sequences

More...RefSeqi		NP_001018011.1, NM_001018011.1 [Q05516-1]
NP_005997.2, NM_006006.4 [Q05516-1]
XP_016873746.1, XM_017018257.1
XP_016873747.1, XM_017018258.1
XP_016873748.1, XM_017018259.1 [Q05516-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000335953; ENSP00000338157; ENSG00000109906 [Q05516-1]
ENST00000392996; ENSP00000376721; ENSG00000109906 [Q05516-1]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		7704

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:7704

UCSC genome browser

More...UCSCi		uc001pop.4, human [Q05516-1]

Keywords - Coding sequence diversityi

Alternative splicing, Chromosomal rearrangement

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

<p>This subsection of the <a href="http://www.uniprot.org/manual/cross%5Freferences%5Fsection">Cross-references</a> section provides links to various web resources that are relevant for a specific protein.<p><a href='/help/web_resource' target='_top'>More...</a></p>Web resourcesi

Atlas of Genetics and Cytogenetics in Oncology and Haematology

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z19002 mRNA Translation: CAA79489.1
AF060568 Genomic DNA Translation: AAD03619.1
BC026902 mRNA Translation: AAH26902.1
BC029812 mRNA Translation: AAH29812.1
S60093 Genomic DNA Translation: AAC60590.2
CCDSiCCDS8367.1 [Q05516-1]
PIRiS36336
RefSeqiNP_001018011.1, NM_001018011.1 [Q05516-1]
NP_005997.2, NM_006006.4 [Q05516-1]
XP_016873746.1, XM_017018257.1
XP_016873747.1, XM_017018258.1
XP_016873748.1, XM_017018259.1 [Q05516-1]

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1BUOX-ray1.90A6-126[»]
1CS3X-ray2.00A7-122[»]
SMRiQ05516
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

BioGRIDi113498, 129 interactors
DIPiDIP-2654N
IntActiQ05516, 120 interactors
MINTiQ05516
STRINGi9606.ENSP00000338157

Chemistry databases

BindingDBiQ05516
ChEMBLiCHEMBL4105726

Protein family/group databases

MoonDBiQ05516, Predicted

PTM databases

iPTMnetiQ05516
PhosphoSitePlusiQ05516

Polymorphism and mutation databases

BioMutaiZBTB16
DMDMi90109930

Proteomic databases

EPDiQ05516
MassIVEiQ05516
PaxDbiQ05516
PeptideAtlasiQ05516
PRIDEiQ05516
ProteomicsDBi58332 [Q05516-1]
58333 [Q05516-2]

Protocols and materials databases

ABCD curated depository of sequenced antibodies

More...ABCDi		Q05516, 3 sequenced antibodies

Antibodypedia a portal for validated antibodies

More...Antibodypediai		897, 374 antibodies

The DNASU plasmid repository

More...DNASUi		7704

Genome annotation databases

EnsembliENST00000335953; ENSP00000338157; ENSG00000109906 [Q05516-1]
ENST00000392996; ENSP00000376721; ENSG00000109906 [Q05516-1]
GeneIDi7704
KEGGihsa:7704
UCSCiuc001pop.4, human [Q05516-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		7704
DisGeNETi7704
EuPathDBiHostDB:ENSG00000109906.13

GeneCards: human genes, protein and diseases

More...GeneCardsi		ZBTB16
HGNCiHGNC:12930, ZBTB16
HPAiENSG00000109906, Low tissue specificity
MalaCardsiZBTB16
MIMi176797, gene
612447, phenotype
neXtProtiNX_Q05516
OpenTargetsiENSG00000109906
Orphaneti520, Acute promyelocytic leukemia
99861, Precursor T-cell acute lymphoblastic leukemia
PharmGKBiPA37517

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiKOG1721, Eukaryota
GeneTreeiENSGT00940000154616
HOGENOMiCLU_026420_0_0_1
InParanoidiQ05516
KOiK10055
OMAiMGLIQLQ
PhylomeDBiQ05516
TreeFamiTF350825

Enzyme and pathway databases

UniPathwayiUPA00143
PathwayCommonsiQ05516
ReactomeiR-HSA-8951664, Neddylation
R-HSA-983168, Antigen processing: Ubiquitination & Proteasome degradation
SignaLinkiQ05516
SIGNORiQ05516

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		7704, 3 hits in 894 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		ZBTB16, human
EvolutionaryTraceiQ05516

The Gene Wiki collection of pages on human genes and proteins

More...GeneWikii		Zinc_finger_and_BTB_domain-containing_protein_16

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		7704
PharosiQ05516, Tbio

Protein Ontology

More...PROi		PR:Q05516
RNActiQ05516, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000109906, Expressed in upper lobe of lung and 235 other tissues
ExpressionAtlasiQ05516, baseline and differential
GenevisibleiQ05516, HS

Family and domain databases

InterProiView protein in InterPro
IPR000210, BTB/POZ_dom
IPR011333, SKP1/BTB/POZ_sf
IPR036236, Znf_C2H2_sf
IPR013087, Znf_C2H2_type
PfamiView protein in Pfam
PF00651, BTB, 1 hit
PF00096, zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00225, BTB, 1 hit
SM00355, ZnF_C2H2, 9 hits
SUPFAMiSSF54695, SSF54695, 1 hit
SSF57667, SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS50097, BTB, 1 hit
PS00028, ZINC_FINGER_C2H2_1, 8 hits
PS50157, ZINC_FINGER_C2H2_2, 9 hits

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiZBT16_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q05516
Secondary accession number(s): Q8TAL4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: March 7, 2006
Last modified: August 12, 2020
This is version 218 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  6. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  7. SIMILARITY comments
    Index of protein domains and families
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