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Entry version 121 (07 Apr 2021)
Sequence version 1 (01 Nov 1997)
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Protein

Protein SOV1, mitochondrial

Gene

SOV1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Miscellaneous

Present with 396 molecules/cell in log phase SD medium.1 Publication

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Protein SOV1, mitochondrial
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:SOV1
Ordered Locus Names:YMR066W
ORF Names:YM9916.05
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri559292 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002311 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome XIII

Organism-specific databases

Saccharomyces Genome Database

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SGDi
S000004670, SOV1

Eukaryotic Pathogen, Vector and Host Database Resources

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VEuPathDBi
FungiDB:YMR066W

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Mitochondrion

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a transit peptide.<p><a href='/help/transit' target='_top'>More...</a></p>Transit peptidei1 – 31MitochondrionCuratedAdd BLAST31
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000020328032 – 898Protein SOV1, mitochondrialAdd BLAST867

Proteomic databases

MaxQB - The MaxQuant DataBase

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MaxQBi
Q04748

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
Q04748

PRoteomics IDEntifications database

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PRIDEi
Q04748

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

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BioGRIDi
35241, 106 interactors

Database of interacting proteins

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DIPi
DIP-2567N

Protein interaction database and analysis system

More...
IntActi
Q04748, 26 interactors

Molecular INTeraction database

More...
MINTi
Q04748

STRING: functional protein association networks

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STRINGi
4932.YMR066W

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

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RNActi
Q04748, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Keywords - Domaini

Transit peptide

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
ENOG502QQPQ, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_327620_0_0_1

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
Q04748

Identification of Orthologs from Complete Genome Data

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OMAi
DPINESF

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

Q04748-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFKYNRSLCS SALIAKSQIR FYRLKRAPLN YASHIPEVLN KTIIGPDEPE
60 70 80 90 100
KCLILKGKTS EEIENNLLSN KKFQEINPLD TIQETFIQYL KFCNETNFKR
110 120 130 140 150
SNKNLNRLKK TLESKDSNST VKINAVFNYL LEECDLEIKR LNTTGQTQVY
160 170 180 190 200
NEEKGNEDDL EQSIMNDIFR SAQEQFEDQE GHIPLRSTSF LLEILKSFNE
210 220 230 240 250
RFNGIIKPKE SITEMVTFSQ LAQAFEVVKL IPVQEMKEKG IYLVGNLLYG
260 270 280 290 300
TGKVRLDPIN ESFYIESLLV FGNYKAAYSL FITNKDKVNE RWWNELGLMI
310 320 330 340 350
TLRSNHLRNF RKLLAETDAK YSTKYSYLSP RVTKLSIRKY LSIGNVTEAN
360 370 380 390 400
ILTDRFIKLV EEVGIIRMKD EQEELPTGVK NFQNEKHATE FLNELEIPSD
410 420 430 440 450
HDYISIVDFH LYKRNIPMAA QLISKYMEIP GTTQEDAAFL LVKTKLNMLK
460 470 480 490 500
DFEKLRNIFA QNKDYVVPEN NVKMLQEAFE SVITKYNTNS PIYNELLFEN
510 520 530 540 550
VSALTKSIVL TDFLEEFITK QASGQWMELN SVSRSRKFNG LLNILLGTGE
560 570 580 590 600
EEKAYNILKK LEEASKKSKT DPDLLYNQFY SEVNAYHYAK FVEFYSLQIQ
610 620 630 640 650
NMKAQNTPSF RKKEFKQKVK SLLKRMQESE VIPNAVFLRE ILNFYDSMYD
660 670 680 690 700
FNSSFEIINP LLESKQQVSS ESSLSTSNPC RFYNRRIITK PLYHKIWSVY
710 720 730 740 750
CHYYHVLQNN SRILSKKSSI VKKLIKRQIK IHPTCHPRVL FQMTAENGEI
760 770 780 790 800
LPDKTFSKLI VSTFMKSGDL EAIPAILTFL TKKFDLNIDY DLSMYILKGL
810 820 830 840 850
KRQYLRDISN ISKDACEYKL RKAELMNNES ILKNIPQGTN QENTISHLIR
860 870 880 890
EILIFIKWKE KSDCSTFLMV EDAFKELGTE FTLLEELIED VNKLKIKA
Length:898
Mass (Da):104,748
Last modified:November 1, 1997 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5707F3ACEEC751F7
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
Z48952 Genomic DNA Translation: CAA88791.1
BK006946 Genomic DNA Translation: DAA09964.1

Protein sequence database of the Protein Information Resource

More...
PIRi
S52826

NCBI Reference Sequences

More...
RefSeqi
NP_013782.1, NM_001182564.1

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
YMR066W_mRNA; YMR066W; YMR066W

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
855088

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
sce:YMR066W

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z48952 Genomic DNA Translation: CAA88791.1
BK006946 Genomic DNA Translation: DAA09964.1
PIRiS52826
RefSeqiNP_013782.1, NM_001182564.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGRIDi35241, 106 interactors
DIPiDIP-2567N
IntActiQ04748, 26 interactors
MINTiQ04748
STRINGi4932.YMR066W

Proteomic databases

MaxQBiQ04748
PaxDbiQ04748
PRIDEiQ04748

Genome annotation databases

EnsemblFungiiYMR066W_mRNA; YMR066W; YMR066W
GeneIDi855088
KEGGisce:YMR066W

Organism-specific databases

SGDiS000004670, SOV1
VEuPathDBiFungiDB:YMR066W

Phylogenomic databases

eggNOGiENOG502QQPQ, Eukaryota
HOGENOMiCLU_327620_0_0_1
InParanoidiQ04748
OMAiDPINESF

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q04748
RNActiQ04748, protein

Family and domain databases

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSOV1_YEAST
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q04748
Secondary accession number(s): D6VZP0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: April 7, 2021
This is version 121 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome XIII
    Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names
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