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Entry version 80 (12 Aug 2020)
Sequence version 1 (01 Feb 1995)
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Protein

Uncharacterized 104.1 kDa protein in hypE 3'region

Gene
N/A
Organism
Rhodobacter capsulatus (Rhodopseudomonas capsulata)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized 104.1 kDa protein in hypE 3'region
Alternative name(s):
ORF19
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRhodobacter capsulatus (Rhodopseudomonas capsulata)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1061 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001760471 – 952Uncharacterized 104.1 kDa protein in hypE 3'regionAdd BLAST952

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
Q02998

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
Q02998

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1 – 141CheB-type methylesterasePROSITE-ProRule annotationAdd BLAST141
Domaini168 – 440CheR-type methyltransferasePROSITE-ProRule annotationAdd BLAST273

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00130, PAS, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.40.50.180, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR035909, CheB_C
IPR022642, CheR_C
IPR000780, CheR_MeTrfase
IPR022641, CheR_N
IPR000014, PAS
IPR035965, PAS-like_dom_sf
IPR013656, PAS_4
IPR029063, SAM-dependent_MTases
IPR000673, Sig_transdc_resp-reg_Me-estase

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01339, CheB_methylest, 1 hit
PF01739, CheR, 1 hit
PF03705, CheR_N, 1 hit
PF08448, PAS_4, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00996, CHERMTFRASE

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00138, MeTrc, 1 hit
SM00091, PAS, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52738, SSF52738, 1 hit
SSF53335, SSF53335, 1 hit
SSF55785, SSF55785, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50122, CHEB, 1 hit
PS50123, CHER, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q02998-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASLLARHTK MPVVTVEDEM ELAADTVFLI PPATIMTLEG RHLRLAPKDR
60 70 80 90 100
RVLSLPIDAF FTSMAAGFGS RAVAVVLSGT GSDGTRGVGA VHAAGGVAIA
110 120 130 140 150
QDPRDARFDG MPRSAIATGF IDSALGIERI GPWIADYLIR RPRLGQLTGA
160 170 180 190 200
ERPDGATGVA VDDDRVAVGQ FDGLEPAEAL GRIVEILSLS GEVNFLDYKP
210 220 230 240 250
GTVQRRIERR MGVRQVPDLT SYLELLTHDR TELASLRREM LIPVTSFFRD
260 270 280 290 300
PDSFAELAEK VIDPLVAQAA VGSTLRVWTA GCATGEEAYT LAMLFFDAFE
310 320 330 340 350
RAGRWPTLKI FATDVEPMNI ETAAAGFFAE TIAADLPTTF LERFFTTRGG
360 370 380 390 400
QYTIRPEIRQ TIVFARHNLL SDPPFTRMDL VTCRNTLIYF RPEAQERALR
410 420 430 440 450
RMHYAVRTGG YLFLGGSEAL VQVQDDFSVL SARHRIWQAL RPGAAPLTDR
460 470 480 490 500
RAGLYVTPRP PATRRDNAPV TAVERGFATL SRTYAPPPAL LVNSHHEILH
510 520 530 540 550
SYGEVSRFMQ MREGAASLEI GRMLVEPLLP VASALLFKSA RLGEEAASDS
560 570 580 590 600
IPIAEGILGP DPMRLRLRVV PVKQGTDSDE GRLYILAFEP DEGPDDGISG
610 620 630 640 650
IDIDREVGAR IEMLEAELAM TRESLQAMIE ELETSNEELQ ATNEEMMASN
660 670 680 690 700
EELQSANEEL QSVNEELNSL NAEYQEKIDL LNRSNADLDS LTEIMAMSTI
710 720 730 740 750
FVDSELTVTR FSPDAAELFR IRDVDVGRPL GDLTHRLDYP ALLDDLRRTL
760 770 780 790 800
QGQSRTEREV SGLNGRHYLV RMLPYRVPSS AAQGAVVTFV DITQTRNLQL
810 820 830 840 850
LQAVIDGLAE HVAVLDGHGD ILLVNAAWTR FAADNGDPGL AHTGVGTNYV
860 870 880 890 900
GRCDIGEAAI DSGYAKRAVE GIRSVLTGKQ RHFTMEYPCD APGQPRWFVM
910 920 930 940 950
HARPLDGARG GAVVSHIEIT RWHNQTEASP ETSSGGLPGS DGTGADGGAP

RA
Length:952
Mass (Da):104,046
Last modified:February 1, 1995 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i7E7E5E33BCBC8C62
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
Z15088 Genomic DNA Translation: CAA78796.1

Protein sequence database of the Protein Information Resource

More...
PIRi
S32954

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z15088 Genomic DNA Translation: CAA78796.1
PIRiS32954

3D structure databases

SMRiQ02998
ModBaseiSearch...

Proteomic databases

PRIDEiQ02998

Family and domain databases

CDDicd00130, PAS, 1 hit
Gene3Di3.40.50.180, 1 hit
InterProiView protein in InterPro
IPR035909, CheB_C
IPR022642, CheR_C
IPR000780, CheR_MeTrfase
IPR022641, CheR_N
IPR000014, PAS
IPR035965, PAS-like_dom_sf
IPR013656, PAS_4
IPR029063, SAM-dependent_MTases
IPR000673, Sig_transdc_resp-reg_Me-estase
PfamiView protein in Pfam
PF01339, CheB_methylest, 1 hit
PF01739, CheR, 1 hit
PF03705, CheR_N, 1 hit
PF08448, PAS_4, 1 hit
PRINTSiPR00996, CHERMTFRASE
SMARTiView protein in SMART
SM00138, MeTrc, 1 hit
SM00091, PAS, 2 hits
SUPFAMiSSF52738, SSF52738, 1 hit
SSF53335, SSF53335, 1 hit
SSF55785, SSF55785, 2 hits
PROSITEiView protein in PROSITE
PS50122, CHEB, 1 hit
PS50123, CHER, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiYH19_RHOCA
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q02998
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: August 12, 2020
This is version 80 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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