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UniProtKB - Q02742 (GCNT1_HUMAN)

Entry version 169 (07 Apr 2021)
Sequence version 2 (16 Dec 2008)
Previous versions | rss
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Protein

Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

Gene

GCNT1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Glycosyltransferase that catalyzes the transfer of an N-acetylglucosamine moiety onto mucin-type core 1 O-glycan to form the branched mucin-type core 2 O-glycan. Mucin-type core 2 O-glycans play an important role in leukocyte extravasation as they serve as scaffolds for the display of the selectin ligand sialyl Lewis X by leukocytes.1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section describes the metabolic pathway(s) associated with a protein.<p><a href='/help/pathway' target='_top'>More...</a></p>Pathwayi: protein glycosylation

This protein is involved in the pathway protein glycosylation, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein glycosylation and in Protein modification.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei320By similarity1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosyltransferase, Transferase

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		MetaCyc:HS05939-MONOMER

BRENDA Comprehensive Enzyme Information System

More...BRENDAi		2.4.1.102, 2681

Pathway Commons web resource for biological pathway data

More...PathwayCommonsi		Q02742

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-HSA-913709, O-linked glycosylation of mucins

SignaLink: a signaling pathway resource with multi-layered regulatory networks

More...SignaLinki		Q02742

UniPathway: a resource for the exploration and annotation of metabolic pathways

More...UniPathwayi		UPA00378

Protein family/group databases

Carbohydrate-Active enZymes

More...CAZyi		GT14, Glycosyltransferase Family 14

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase (EC:2.4.1.102)
Alternative name(s):
Core 2-branching enzyme
Core2-GlcNAc-transferase
Short name:
C2GNT
Short name:
Core 2 GNT
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:GCNT1
Synonyms:NACGT2
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9

Organism-specific databases

Human Gene Nomenclature Database

More...HGNCi		HGNC:4203, GCNT1

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		600391, gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q02742

Eukaryotic Pathogen, Vector and Host Database Resources

More...VEuPathDBi		HostDB:ENSG00000187210.12

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 9CytoplasmicSequence analysis9
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei10 – 32Helical; Signal-anchor for type II membrane proteinSequence analysisAdd BLAST23
Topological domaini33 – 428LumenalSequence analysisAdd BLAST396

Keywords - Cellular componenti

Golgi apparatus, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology%5Fand%5Fbiotech%5Fsection">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi5 – 6LL → AA: Loss of interaction with GOLPH3 and loss of localization to the Golgi. 1 Publication2
Mutagenesisi7 – 9RRR → AAA: Loss of interaction with GOLPH3 and loss of localization to the Golgi. 1 Publication3

Organism-specific databases

DisGeNET

More...DisGeNETi		2650

Open Targets

More...OpenTargetsi		ENSG00000187210

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA168

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...Pharosi		Q02742, Tbio

Chemistry databases

ChEMBL database of bioactive drug-like small molecules

More...ChEMBLi		CHEMBL2321632

Genetic variation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		GCNT1

Domain mapping of disease mutations (DMDM)

More...DMDMi		218512053

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001913951 – 428Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferaseAdd BLAST428

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi58N-linked (GlcNAc...) asparagineSequence analysis1
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi59 ↔ 413By similarity
Glycosylationi95N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi100 ↔ 172By similarity
Disulfide bondi151 ↔ 199By similarity
Disulfide bondi372 ↔ 381By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		Q02742

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q02742

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...MassIVEi		Q02742

MaxQB - The MaxQuant DataBase

More...MaxQBi		Q02742

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q02742

PeptideAtlas

More...PeptideAtlasi		Q02742

PRoteomics IDEntifications database

More...PRIDEi		Q02742

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		58117

PTM databases

GlyGen: Computational and Informatics Resources for Glycoscience

More...GlyGeni		Q02742, 2 sites

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q02742

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q02742

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Highly expressed in activated T-lymphocytes and myeloid cells.

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000187210, Expressed in duodenum and 173 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q02742, HS

Organism-specific databases

Human Protein Atlas

More...HPAi		ENSG00000187210, Tissue enhanced (intestine, parathyroid gland)

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with GOLPH3; may control GCNT1 retention in the Golgi.

1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		108920, 12 interactors

Protein interaction database and analysis system

More...IntActi		Q02742, 19 interactors

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000415454

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q02742, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q02742

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni5 – 9Mediates interaction with GOLPH3 and is necessary and sufficient for localization to the Golgi1 Publication5
Regioni33 – 121Stem regionBy similarityAdd BLAST89
Regioni122 – 428CatalyticBy similarityAdd BLAST307

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the glycosyltransferase 14 family.Curated

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG0799, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00940000161348

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_032341_1_2_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q02742

Identification of Orthologs from Complete Genome Data

More...OMAi		PSSNINC

Database of Orthologous Groups

More...OrthoDBi		868849at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q02742

TreeFam database of animal gene trees

More...TreeFami		TF315534

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR003406, Glyco_trans_14

Pfam protein domain database

More...Pfami		View protein in Pfam
PF02485, Branch, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q02742-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLRTLLRRRL FSYPTKYYFM VLVLSLITFS VLRIHQKPEF VSVRHLELAG 
        60         70         80         90        100
ENPSSDINCT KVLQGDVNEI QKVKLEILTV KFKKRPRWTP DDYINMTSDC 
       110        120        130        140        150
SSFIKRRKYI VEPLSKEEAE FPIAYSIVVH HKIEMLDRLL RAIYMPQNFY 
       160        170        180        190        200
CIHVDTKSED SYLAAVMGIA SCFSNVFVAS RLESVVYASW SRVQADLNCM 
       210        220        230        240        250
KDLYAMSANW KYLINLCGMD FPIKTNLEIV RKLKLLMGEN NLETERMPSH 
       260        270        280        290        300
KEERWKKRYE VVNGKLTNTG TVKMLPPLET PLFSGSAYFV VSREYVGYVL 
       310        320        330        340        350
QNEKIQKLME WAQDTYSPDE YLWATIQRIP EVPGSLPASH KYDLSDMQAV 
       360        370        380        390        400
ARFVKWQYFE GDVSKGAPYP PCDGVHVRSV CIFGAGDLNW MLRKHHLFAN 
       410        420 
KFDVDVDLFA IQCLDEHLRH KALETLKH
Length:428
Mass (Da):49,799
Last modified:December 16, 2008 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i71D71A251874E1F0
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_048000152I → V2 PublicationsCorresponds to variant dbSNP:rs2282683Ensembl.1
Natural variantiVAR_048001158S → C. Corresponds to variant dbSNP:rs11546569Ensembl.1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
M97347 mRNA Translation: AAA35919.1
L41415 Genomic DNA Translation: AAA96661.1
AL161626 Genomic DNA No translation available.
CH471089 Genomic DNA Translation: EAW62580.1
BC074885 mRNA Translation: AAH74885.1
BC074886 mRNA Translation: AAH74886.1
BC109101 mRNA Translation: AAI09102.1
BC109102 mRNA Translation: AAI09103.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS6653.1

Protein sequence database of the Protein Information Resource

More...PIRi		A46293

NCBI Reference Sequences

More...RefSeqi		NP_001091102.1, NM_001097633.1
NP_001091103.1, NM_001097634.1
NP_001091104.1, NM_001097635.1
NP_001091105.1, NM_001097636.1
NP_001481.2, NM_001490.4
XP_016870109.1, XM_017014620.1
XP_016870110.1, XM_017014621.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000376730; ENSP00000365920; ENSG00000187210
ENST00000442371; ENSP00000415454; ENSG00000187210
ENST00000444201; ENSP00000390703; ENSG00000187210

Database of genes from NCBI RefSeq genomes

More...GeneIDi		2650

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:2650

UCSC genome browser

More...UCSCi		uc004akf.5, human

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

<p>This subsection of the <a href="http://www.uniprot.org/manual/cross%5Freferences%5Fsection">Cross-references</a> section provides links to various web resources that are relevant for a specific protein.<p><a href='/help/web_resource' target='_top'>More...</a></p>Web resourcesi

Functional Glycomics Gateway - GTase

Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M97347 mRNA Translation: AAA35919.1
L41415 Genomic DNA Translation: AAA96661.1
AL161626 Genomic DNA No translation available.
CH471089 Genomic DNA Translation: EAW62580.1
BC074885 mRNA Translation: AAH74885.1
BC074886 mRNA Translation: AAH74886.1
BC109101 mRNA Translation: AAI09102.1
BC109102 mRNA Translation: AAI09103.1
CCDSiCCDS6653.1
PIRiA46293
RefSeqiNP_001091102.1, NM_001097633.1
NP_001091103.1, NM_001097634.1
NP_001091104.1, NM_001097635.1
NP_001091105.1, NM_001097636.1
NP_001481.2, NM_001490.4
XP_016870109.1, XM_017014620.1
XP_016870110.1, XM_017014621.1

3D structure databases

SMRiQ02742
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi108920, 12 interactors
IntActiQ02742, 19 interactors
STRINGi9606.ENSP00000415454

Chemistry databases

ChEMBLiCHEMBL2321632

Protein family/group databases

CAZyiGT14, Glycosyltransferase Family 14

PTM databases

GlyGeniQ02742, 2 sites
iPTMnetiQ02742
PhosphoSitePlusiQ02742

Genetic variation databases

BioMutaiGCNT1
DMDMi218512053

Proteomic databases

EPDiQ02742
jPOSTiQ02742
MassIVEiQ02742
MaxQBiQ02742
PaxDbiQ02742
PeptideAtlasiQ02742
PRIDEiQ02742
ProteomicsDBi58117

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		27275, 219 antibodies

The DNASU plasmid repository

More...DNASUi		2650

Genome annotation databases

EnsembliENST00000376730; ENSP00000365920; ENSG00000187210
ENST00000442371; ENSP00000415454; ENSG00000187210
ENST00000444201; ENSP00000390703; ENSG00000187210
GeneIDi2650
KEGGihsa:2650
UCSCiuc004akf.5, human

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		2650
DisGeNETi2650

GeneCards: human genes, protein and diseases

More...GeneCardsi		GCNT1
HGNCiHGNC:4203, GCNT1
HPAiENSG00000187210, Tissue enhanced (intestine, parathyroid gland)
MIMi600391, gene
neXtProtiNX_Q02742
OpenTargetsiENSG00000187210
PharmGKBiPA168
VEuPathDBiHostDB:ENSG00000187210.12

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiKOG0799, Eukaryota
GeneTreeiENSGT00940000161348
HOGENOMiCLU_032341_1_2_1
InParanoidiQ02742
OMAiPSSNINC
OrthoDBi868849at2759
PhylomeDBiQ02742
TreeFamiTF315534

Enzyme and pathway databases

UniPathwayiUPA00378
BioCyciMetaCyc:HS05939-MONOMER
BRENDAi2.4.1.102, 2681
PathwayCommonsiQ02742
ReactomeiR-HSA-913709, O-linked glycosylation of mucins
SignaLinkiQ02742

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		2650, 5 hits in 988 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		GCNT1, human

The Gene Wiki collection of pages on human genes and proteins

More...GeneWikii		GCNT1

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		2650
PharosiQ02742, Tbio

Protein Ontology

More...PROi		PR:Q02742
RNActiQ02742, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000187210, Expressed in duodenum and 173 other tissues
GenevisibleiQ02742, HS

Family and domain databases

InterProiView protein in InterPro
IPR003406, Glyco_trans_14
PfamiView protein in Pfam
PF02485, Branch, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiGCNT1_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q02742
Secondary accession number(s): Q6DJZ4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: December 16, 2008
Last modified: April 7, 2021
This is version 169 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
  2. Human entries with genetic variants
    List of human entries with genetic variants
  3. Human variants curated from literature reports
    Index of human variants curated from literature reports
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  6. SIMILARITY comments
    Index of protein domains and families
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