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Protein

Protein U5

Gene

U5

Organism
Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein U5
Gene namesi
Name:U5
Synonyms:SSL1
OrganismiHuman herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)
Taxonomic identifieri10370 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeBetaherpesvirinaeRoseolovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000009295 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001163101 – 444Protein U5Add BLAST444

Proteomic databases

PRIDEiQ01352

Structurei

3D structure databases

SMRiQ01352
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the herpesviridae U4 family.Curated

Family and domain databases

InterProiView protein in InterPro
IPR010302 U5-like_protein_herpesevirus
PfamiView protein in Pfam
PF05999 Herpes_U5, 1 hit

Sequencei

Sequence statusi: Complete.

Q01352-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVKDLKFMDN FNEKWQCITK LAFLGLYAGA SLFNFTSKPT LGYWCRYLSE
60 70 80 90 100
YASMLLFQFE SKLKELTKES TRQLGGYNLC HWGQELKDCL ENKSDVFFRY
110 120 130 140 150
DFFERIESCL IEHFMLLCGC VECRRMFIMY NKRGRKFDFG HSVRIQCFPM
160 170 180 190 200
IGSIRLPAFL HLGEPYDVSL SSLIAKDLGL SMIEGQIELS RLPISLQISV
210 220 230 240 250
TPDKKALLTF LTNIVFIVFV VNTLYRVINA ELDIYYDLFT EEVGKLCVAM
260 270 280 290 300
EEEMKLGRNG CLGDLCYFSP MKQMKEIVRC PGEKSQFILK CWEALRIGFS
310 320 330 340 350
VPAYKDYDET PFMEMFFMHH LHIKRFHEDN DRDLVSCDNL IPGFFIVNTD
360 370 380 390 400
GENFLQRLQR VVLPVVEDYL TNTRCINGTM AFFFSGLKYF GSGNHRGFQI
410 420 430 440
SPEKDVRAIA YKLGSLDVLR DDYKYYEYTP PDCPGELNGH GGDE
Length:444
Mass (Da):51,586
Last modified:October 1, 1996 - v2
Checksum:iD94F16B44D938EB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D10082 Genomic DNA Translation: BAA32340.1
X83413 Genomic DNA Translation: CAA58432.1
PIRiJQ1650

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D10082 Genomic DNA Translation: BAA32340.1
X83413 Genomic DNA Translation: CAA58432.1
PIRiJQ1650

3D structure databases

SMRiQ01352
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ01352

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR010302 U5-like_protein_herpesevirus
PfamiView protein in Pfam
PF05999 Herpes_U5, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiVU5_HHV6U
AccessioniPrimary (citable) accession number: Q01352
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: October 1, 1996
Last modified: June 20, 2018
This is version 48 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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