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Entry version 56 (02 Jun 2021)
Sequence version 1 (01 Dec 1992)
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Protein

Uncharacterized protein ORF65

Gene

ORF65

Organism
Ictalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein ORF65
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ORF65
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri766178 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiVirusesDuplodnaviriaHeunggongviraePeploviricotaHerviviricetesHerpesviralesAlloherpesviridaeIctalurivirus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section only exists in viral entries and indicates the host(s) either as a specific organism or taxonomic group of organisms that are susceptible to be infected by a virus.<p><a href='/help/virus_host' target='_top'>More...</a></p>Virus hostiIctaluridae (bullhead catfishes) [TaxID: 7996]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000007643 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002221431 – 1434Uncharacterized protein ORF65Add BLAST1434

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q00106

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1284 – 1409OTUPROSITE-ProRule annotationAdd BLAST126

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni724 – 753DisorderedSequence analysisAdd BLAST30
Regioni848 – 1087DisorderedSequence analysisAdd BLAST240
Regioni1111 – 1148DisorderedSequence analysisAdd BLAST38
Regioni1182 – 1207DisorderedSequence analysisAdd BLAST26

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi931 – 967Pro residuesSequence analysisAdd BLAST37
Compositional biasi1066 – 1087Basic and acidic residuesSequence analysisAdd BLAST22

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003323, OTU_dom
IPR038765, Papain-like_cys_pep_sf

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF54001, SSF54001, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50802, OTU, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q00106-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEINAAIESL TSITDLDPTA VCDDHPNIYL RATMDGALGV MSHIKPVLSE
60 70 80 90 100
TVTTALEDDT VVSSRYAIVT APPRYKIVEQ PYTDADKGYL RGLRTPEACI
110 120 130 140 150
MYMHYINKII SHAPANPLVR DAVQSMNLNL GLHRDMILGS YSVDDIYTRL
160 170 180 190 200
DPVAPQIVLG GALYRILHSR NALYPKCAIG VVGPFNQWVD TAQPAGPCAT
210 220 230 240 250
PEVNDILNVA REYELPQRVV ADLLIEWVLE TSVPIPRGTR NRITLELQKA
260 270 280 290 300
LATHLPAGLF HDIVIVGLGI GLPPRAVSGL EEKMGIDLFW KTQNSYHGRD
310 320 330 340 350
SVSFRGALEN AAVRDCSVIT SATGKTAPVT TFGLVTVRTN PPFPKLSKLV
360 370 380 390 400
TYAPHPPITR SPFLCARVRD VYDQEIEVPH GRASGPRHFS PRMVVLRERA
410 420 430 440 450
ASVPVLTNTL HEHSFSRGYF IPIFLREYKS IYAFWSTLGL PSRSHPLYIF
460 470 480 490 500
HVLSRSNIRT LETIPDPVPF HPKERVFMGQ CLAFYVRETG EELYALKIFR
510 520 530 540 550
LVMERGVLPM YARGDSAPVQ ILGFIVNICA ALLAFDDTDG LDSLDMDTYD
560 570 580 590 600
ELSALGRVVW YVWLLTTLFP LYMTTATEPE FLDPMFEGTY RLGEWNYVTT
610 620 630 640 650
TGALYPGDNI ERLSVSVDYG ALDEKTKGFG ETLNIPVHVI GIVNQFIFPI
660 670 680 690 700
LSAQLPYAFR RLPNKSVVRH PIDMIEAVRR KLSERFGSCV NPPYVGPITP
710 720 730 740 750
SASVPTGKYI HVMKHPEAYP EYTVEASNGT DGDSLSDDSD DESAEPTSTP
760 770 780 790 800
ASWIGDRDEK VRLEARLREM EATVRNDLLI GGRFTHTGPP VIRQPVPRAF
810 820 830 840 850
PKVDVSLMAE AEKRSGDMLK RLDDVYDLVA KTTHMVETGG MFPVTDLETL
860 870 880 890 900
PPPPADLLQT SVDSESRSIA PGADPVSHDL DKLDLPPAAY EEPDLPLDLP
910 920 930 940 950
PAAYEELDLP LDLPPGAYEE PDLPRDLPPG AYEEPDLPPD LPRDLPPAAY
960 970 980 990 1000
EEPDLPPDLP RDLPPAAYEE PAPRAESSED STGTTGADGS LPVVSPPEPM
1010 1020 1030 1040 1050
SAPGGEPATG TTGVRGFKSE RLILPRKIMS SIPRPSDALK ERLSTRRTQM
1060 1070 1080 1090 1100
YDSGSDSESD SSEYDNSDSD DGRTERATSS TLDDEVERMT HSFNEWVRIS
1110 1120 1130 1140 1150
TNPVATISDI PPALDPPSDS IGSPGEGAAE EVQLGADPGG DHTRAPPVAD
1160 1170 1180 1190 1200
LRGAELDRYL YKESESLISV IDELFTEYVT TPAAPPSGPV VTPPVADNGG
1210 1220 1230 1240 1250
TRETHPREKC PYTVAEKYRI LYTYGEQDEL AALVESTGAG TDVERRVSAR
1260 1270 1280 1290 1300
VLANVPVSSA VIINESLEED QFTRLENTLY SMGLKRVYIP GDGNCLYNTL
1310 1320 1330 1340 1350
RFIAGADGES AIDFKKELLD DIRKYVRNQD PAERDLILTE IDNLAGPNVY
1360 1370 1380 1390 1400
GSGDLISFFQ LLRGVGVTVV SWDKIGGRLV KLVATNQEGI PPEYIILFTN
1410 1420 1430
SHYEPLVTED TMIPDSYLKD FIEWKRSLFL SAII
Length:1,434
Mass (Da):158,064
Last modified:December 1, 1992 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE54FC5EBB7A1E968
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
M75136 Genomic DNA Translation: AAA88169.1

Protein sequence database of the Protein Information Resource

More...
PIRi
B36793

NCBI Reference Sequences

More...
RefSeqi
NP_041157.1, NC_001493.2

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
1488435

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
vg:1488435

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M75136 Genomic DNA Translation: AAA88169.1
PIRiB36793
RefSeqiNP_041157.1, NC_001493.2

3D structure databases

SMRiQ00106
ModBaseiSearch...

Genome annotation databases

GeneIDi1488435
KEGGivg:1488435

Family and domain databases

InterProiView protein in InterPro
IPR003323, OTU_dom
IPR038765, Papain-like_cys_pep_sf
SUPFAMiSSF54001, SSF54001, 1 hit
PROSITEiView protein in PROSITE
PS50802, OTU, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiVG65_ICHVA
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q00106
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 1, 1992
Last sequence update: December 1, 1992
Last modified: June 2, 2021
This is version 56 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteome
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