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UniProtKB - P98167 (SSPO_BOVIN)

Entry version 142 (23 Feb 2022)
Sequence version 2 (11 Jul 2006)
Previous versions | rss
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Protein

SCO-spondin

Gene

SSPO

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Involved in the modulation of neuronal aggregation (PubMed:8743952).

May be involved in developmental events during the formation of the central nervous system (PubMed:11008217).

2 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processCell adhesion
LigandCalcium

Protein family/group databases

MEROPS protease database

More...MEROPSi		I08.954

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
SCO-spondin2 Publications
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:SSPO
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBos taurus (Bovine)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9913 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Artiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000009136 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unplaced

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Secreted

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 17Sequence analysisAdd BLAST17
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000018646118 – 5146SCO-spondinAdd BLAST5129

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi80N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi122N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi153N-linked (GlcNAc...) asparagineSequence analysis1
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi187 ↔ 317PROSITE-ProRule annotation
Disulfide bondi209 ↔ 355PROSITE-ProRule annotation
Disulfide bondi231 ↔ 237PROSITE-ProRule annotation
Glycosylationi255N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi559 ↔ 692PROSITE-ProRule annotation
Disulfide bondi583 ↔ 729PROSITE-ProRule annotation
Glycosylationi814N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi906N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi1010 ↔ 1142PROSITE-ProRule annotation
Disulfide bondi1032 ↔ 1177PROSITE-ProRule annotation
Disulfide bondi1053 ↔ 1060PROSITE-ProRule annotation
Glycosylationi1349N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi1373 ↔ 1386PROSITE-ProRule annotation
Disulfide bondi1380 ↔ 1399PROSITE-ProRule annotation
Disulfide bondi1393 ↔ 1408PROSITE-ProRule annotation
Disulfide bondi1413 ↔ 1425PROSITE-ProRule annotation
Disulfide bondi1420 ↔ 1438PROSITE-ProRule annotation
Disulfide bondi1432 ↔ 1447PROSITE-ProRule annotation
Disulfide bondi1449 ↔ 1461PROSITE-ProRule annotation
Disulfide bondi1456 ↔ 1474PROSITE-ProRule annotation
Disulfide bondi1468 ↔ 1483PROSITE-ProRule annotation
Disulfide bondi1489 ↔ 1501PROSITE-ProRule annotation
Disulfide bondi1496 ↔ 1514PROSITE-ProRule annotation
Disulfide bondi1508 ↔ 1525PROSITE-ProRule annotation
Disulfide bondi1562 ↔ 1574PROSITE-ProRule annotation
Disulfide bondi1569 ↔ 1587PROSITE-ProRule annotation
Disulfide bondi1581 ↔ 1596PROSITE-ProRule annotation
Disulfide bondi1600 ↔ 1613PROSITE-ProRule annotation
Disulfide bondi1607 ↔ 1626PROSITE-ProRule annotation
Disulfide bondi1620 ↔ 1637PROSITE-ProRule annotation
Glycosylationi1647N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi1703 ↔ 1739PROSITE-ProRule annotation
Disulfide bondi1707 ↔ 1744PROSITE-ProRule annotation
Disulfide bondi1718 ↔ 1729PROSITE-ProRule annotation
Glycosylationi1806N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi1907 ↔ 1946PROSITE-ProRule annotation
Disulfide bondi1918 ↔ 1922PROSITE-ProRule annotation
Disulfide bondi1956 ↔ 1961PROSITE-ProRule annotation
Glycosylationi2027N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi2062 ↔ 2220PROSITE-ProRule annotation
Glycosylationi2127N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi2226 ↔ 2238PROSITE-ProRule annotation
Disulfide bondi2233 ↔ 2251PROSITE-ProRule annotation
Disulfide bondi2245 ↔ 2260PROSITE-ProRule annotation
Disulfide bondi2383 ↔ 2395PROSITE-ProRule annotation
Disulfide bondi2390 ↔ 2408PROSITE-ProRule annotation
Disulfide bondi2402 ↔ 2417PROSITE-ProRule annotation
Disulfide bondi2443 ↔ 2455PROSITE-ProRule annotation
Disulfide bondi2450 ↔ 2468PROSITE-ProRule annotation
Disulfide bondi2462 ↔ 2477PROSITE-ProRule annotation
Disulfide bondi2480 ↔ 2516PROSITE-ProRule annotation
Disulfide bondi2491 ↔ 2495PROSITE-ProRule annotation
Disulfide bondi2526 ↔ 2531PROSITE-ProRule annotation
Disulfide bondi2546 ↔ 2583PROSITE-ProRule annotation
Disulfide bondi2550 ↔ 2588PROSITE-ProRule annotation
Disulfide bondi2561 ↔ 2573PROSITE-ProRule annotation
Glycosylationi2624N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi2673N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi2695 ↔ 2733PROSITE-ProRule annotation
Disulfide bondi2706 ↔ 2710PROSITE-ProRule annotation
Disulfide bondi2743 ↔ 2747PROSITE-ProRule annotation
Disulfide bondi2763 ↔ 2801PROSITE-ProRule annotation
Disulfide bondi2767 ↔ 2806PROSITE-ProRule annotation
Disulfide bondi2783 ↔ 2791PROSITE-ProRule annotation
Disulfide bondi2821 ↔ 2856PROSITE-ProRule annotation
Disulfide bondi2825 ↔ 2861PROSITE-ProRule annotation
Disulfide bondi2836 ↔ 2846PROSITE-ProRule annotation
Glycosylationi2915N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi2946N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi2965 ↔ 3003PROSITE-ProRule annotation
Disulfide bondi2976 ↔ 2980PROSITE-ProRule annotation
Disulfide bondi3013 ↔ 3018PROSITE-ProRule annotation
Glycosylationi3041N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi3143N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi3153N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi3175 ↔ 3224PROSITE-ProRule annotation
Disulfide bondi3179 ↔ 3229PROSITE-ProRule annotation
Disulfide bondi3190 ↔ 3214PROSITE-ProRule annotation
Disulfide bondi3244 ↔ 3281PROSITE-ProRule annotation
Disulfide bondi3248 ↔ 3286PROSITE-ProRule annotation
Disulfide bondi3259 ↔ 3271PROSITE-ProRule annotation
Glycosylationi3290N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi3400 ↔ 3443PROSITE-ProRule annotation
Disulfide bondi3404 ↔ 3449PROSITE-ProRule annotation
Disulfide bondi3415 ↔ 3427PROSITE-ProRule annotation
Disulfide bondi3464 ↔ 3499PROSITE-ProRule annotation
Disulfide bondi3467 ↔ 3506PROSITE-ProRule annotation
Disulfide bondi3477 ↔ 3489PROSITE-ProRule annotation
Glycosylationi3502N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi3580N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi3607N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi3638 ↔ 3668PROSITE-ProRule annotation
Disulfide bondi3642 ↔ 3673PROSITE-ProRule annotation
Disulfide bondi3653 ↔ 3658PROSITE-ProRule annotation
Glycosylationi3783N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi3814 ↔ 3852PROSITE-ProRule annotation
Disulfide bondi3818 ↔ 3857PROSITE-ProRule annotation
Disulfide bondi3830 ↔ 3842PROSITE-ProRule annotation
Glycosylationi3906N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi3938N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi3939 ↔ 3975PROSITE-ProRule annotation
Disulfide bondi3950 ↔ 3954PROSITE-ProRule annotation
Disulfide bondi3988 ↔ 3993PROSITE-ProRule annotation
Disulfide bondi4008 ↔ 4045PROSITE-ProRule annotation
Disulfide bondi4012 ↔ 4050PROSITE-ProRule annotation
Disulfide bondi4023 ↔ 4035PROSITE-ProRule annotation
Glycosylationi4131N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi4152 ↔ 4188PROSITE-ProRule annotation
Disulfide bondi4163 ↔ 4167PROSITE-ProRule annotation
Disulfide bondi4198 ↔ 4203PROSITE-ProRule annotation
Disulfide bondi4257 ↔ 4294PROSITE-ProRule annotation
Disulfide bondi4261 ↔ 4299PROSITE-ProRule annotation
Disulfide bondi4272 ↔ 4284PROSITE-ProRule annotation
Glycosylationi4341N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi4361 ↔ 4398PROSITE-ProRule annotation
Disulfide bondi4372 ↔ 4374PROSITE-ProRule annotation
Disulfide bondi4408 ↔ 4413PROSITE-ProRule annotation
Glycosylationi4412N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi4611 ↔ 4645PROSITE-ProRule annotation
Disulfide bondi4622 ↔ 4626PROSITE-ProRule annotation
Disulfide bondi4655 ↔ 4660PROSITE-ProRule annotation
Glycosylationi4729N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi4746N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi4751N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi4772N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi4773 ↔ 4808PROSITE-ProRule annotation
Disulfide bondi4777 ↔ 4813PROSITE-ProRule annotation
Disulfide bondi4788 ↔ 4797PROSITE-ProRule annotation
Glycosylationi4861N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi4901N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi4947N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi4954N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi5052 ↔ 5100PROSITE-ProRule annotation
Glycosylationi5060N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi5066 ↔ 5117PROSITE-ProRule annotation
Disulfide bondi5076 ↔ 5133PROSITE-ProRule annotation
Disulfide bondi5080 ↔ 5135PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		P98167

PRoteomics IDEntifications database

More...PRIDEi		P98167

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Subcommissural organ. Located at the boundary of the diencephalon and mesencephalon beneath the posterior commissure at the point where the axons cross the midline.2 Publications

<p>This subsection of the 'Expression' section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified 'at the protein level'.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

Embryo.1 Publication

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		9913.ENSBTAP00000041504

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		P98167

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini18 – 94EMIAdd BLAST77
Domaini185 – 356VWFD 1PROSITE-ProRule annotationAdd BLAST172
Domaini464 – 519TIL 1Sequence analysisAdd BLAST56
Domaini557 – 730VWFD 2PROSITE-ProRule annotationAdd BLAST174
Domaini822 – 875TIL 2Sequence analysisAdd BLAST54
Domaini1008 – 1178VWFD 3PROSITE-ProRule annotationAdd BLAST171
Domaini1271 – 1327TIL 3Sequence analysisAdd BLAST57
Domaini1372 – 1409LDL-receptor class A 1PROSITE-ProRule annotationAdd BLAST38
Domaini1412 – 1447LDL-receptor class A 2PROSITE-ProRule annotationAdd BLAST36
Domaini1448 – 1484LDL-receptor class A 3PROSITE-ProRule annotationAdd BLAST37
Domaini1488 – 1526LDL-receptor class A 4PROSITE-ProRule annotationAdd BLAST39
Domaini1561 – 1597LDL-receptor class A 5PROSITE-ProRule annotationAdd BLAST37
Domaini1599 – 1638LDL-receptor class A 6PROSITE-ProRule annotationAdd BLAST40
Domaini1652 – 1690LDL-receptor class A 7PROSITE-ProRule annotationAdd BLAST39
Domaini1691 – 1745TSP type-1 1PROSITE-ProRule annotationAdd BLAST55
Domaini1747 – 1805TSP type-1 2PROSITE-ProRule annotationAdd BLAST59
Domaini1809 – 1865TIL 4Sequence analysisAdd BLAST57
Domaini1821 – 1860EGF-like 1Add BLAST40
Domaini1861 – 1898EGF-like 2Add BLAST38
Domaini1906 – 1962TSP type-1 3PROSITE-ProRule annotationAdd BLAST57
Domaini1962 – 2022VWFC 1PROSITE-ProRule annotationAdd BLAST61
Domaini2062 – 2220F5/8 type CPROSITE-ProRule annotationAdd BLAST159
Domaini2225 – 2261LDL-receptor class A 8PROSITE-ProRule annotationAdd BLAST37
Domaini2382 – 2418LDL-receptor class A 9PROSITE-ProRule annotationAdd BLAST37
Domaini2442 – 2478LDL-receptor class A 10PROSITE-ProRule annotationAdd BLAST37
Domaini2479 – 2532TSP type-1 4PROSITE-ProRule annotationAdd BLAST54
Domaini2534 – 2589TSP type-1 5PROSITE-ProRule annotationAdd BLAST56
Domaini2611 – 2654TIL 5Sequence analysisAdd BLAST44
Domaini2694 – 2748TSP type-1 6PROSITE-ProRule annotationAdd BLAST55
Domaini2751 – 2807TSP type-1 7PROSITE-ProRule annotationAdd BLAST57
Domaini2809 – 2862TSP type-1 8PROSITE-ProRule annotationAdd BLAST54
Domaini2964 – 3019TSP type-1 9PROSITE-ProRule annotationAdd BLAST56
Domaini3020 – 3071TSP type-1 10PROSITE-ProRule annotationAdd BLAST52
Domaini3070 – 3122TIL 6Sequence analysisAdd BLAST53
Domaini3163 – 3230TSP type-1 11PROSITE-ProRule annotationAdd BLAST68
Domaini3232 – 3287TSP type-1 12PROSITE-ProRule annotationAdd BLAST56
Domaini3295 – 3345TIL 7Sequence analysisAdd BLAST51
Domaini3388 – 3450TSP type-1 13PROSITE-ProRule annotationAdd BLAST63
Domaini3452 – 3507TSP type-1 14PROSITE-ProRule annotationAdd BLAST56
Domaini3626 – 3674TSP type-1 15PROSITE-ProRule annotationAdd BLAST49
Domaini3802 – 3858TSP type-1 16PROSITE-ProRule annotationAdd BLAST57
Domaini3872 – 3924TSP type-1 17PROSITE-ProRule annotationAdd BLAST53
Domaini3938 – 3994TSP type-1 18PROSITE-ProRule annotationAdd BLAST57
Domaini3996 – 4051TSP type-1 19PROSITE-ProRule annotationAdd BLAST56
Domaini4054 – 4109TIL 8Sequence analysisAdd BLAST56
Domaini4101 – 4168VWFC 2PROSITE-ProRule annotationAdd BLAST68
Domaini4151 – 4204TSP type-1 20PROSITE-ProRule annotationAdd BLAST54
Domaini4245 – 4300TSP type-1 21PROSITE-ProRule annotationAdd BLAST56
Domaini4302 – 4358TSP type-1 22PROSITE-ProRule annotationAdd BLAST57
Domaini4360 – 4414TSP type-1 23PROSITE-ProRule annotationAdd BLAST55
Domaini4418 – 4473TIL 9Sequence analysisAdd BLAST56
Domaini4610 – 4661TSP type-1 24PROSITE-ProRule annotationAdd BLAST52
Domaini4675 – 4721TIL 10Sequence analysisAdd BLAST47
Domaini4761 – 4814TSP type-1 25PROSITE-ProRule annotationAdd BLAST54
Domaini4816 – 4870TIL 11Sequence analysisAdd BLAST55
Domaini4983 – 5041VWFC 3PROSITE-ProRule annotationAdd BLAST59
Domaini5052 – 5139CTCKPROSITE-ProRule annotationAdd BLAST88

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni2262 – 2346DisorderedSequence analysisAdd BLAST85

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi2327 – 2344Polar residuesSequence analysisAdd BLAST18

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the thrombospondin family.Curated

Keywords - Domaini

EGF-like domain, Repeat, Signal

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG1215, Eukaryota
KOG1216, Eukaryota
KOG3538, Eukaryota
KOG4475, Eukaryota

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		P98167

Database of Orthologous Groups

More...OrthoDBi		12226at2759

Family and domain databases

Conserved Domains Database

More...CDDi		cd00057, FA58C, 1 hit
cd00112, LDLa, 9 hits

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.20.100.10, 25 hits
4.10.400.10, 9 hits

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR006207, Cys_knot_C
IPR000421, FA58C
IPR008979, Galactose-bd-like_sf
IPR036055, LDL_receptor-like_sf
IPR023415, LDLR_class-A_CS
IPR002172, LDrepeatLR_classA_rpt
IPR036201, Pacifastin_dom_sf
IPR030119, SCO-spondin
IPR036084, Ser_inhib-like_sf
IPR002919, TIL_dom
IPR000884, TSP1_rpt
IPR036383, TSP1_rpt_sf
IPR014853, Unchr_dom_Cys-rich
IPR001007, VWF_dom
IPR001846, VWF_type-D

The PANTHER Classification System

More...PANTHERi		PTHR11339:SF358, PTHR11339:SF358, 6 hits

Pfam protein domain database

More...Pfami		View protein in Pfam
PF08742, C8, 3 hits
PF00754, F5_F8_type_C, 1 hit
PF00057, Ldl_recept_a, 8 hits
PF01826, TIL, 11 hits
PF00090, TSP_1, 22 hits
PF00093, VWC, 1 hit
PF00094, VWD, 3 hits

Protein Motif fingerprint database; a protein domain database

More...PRINTSi		PR00261, LDLRECEPTOR

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00832, C8, 3 hits
SM00041, CT, 1 hit
SM00231, FA58C, 1 hit
SM00192, LDLa, 10 hits
SM00209, TSP1, 25 hits
SM00214, VWC, 5 hits
SM00215, VWC_out, 9 hits
SM00216, VWD, 3 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF49785, SSF49785, 1 hit
SSF57283, SSF57283, 1 hit
SSF57424, SSF57424, 9 hits
SSF57567, SSF57567, 14 hits
SSF82895, SSF82895, 24 hits

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS01225, CTCK_2, 1 hit
PS01285, FA58C_1, 1 hit
PS01286, FA58C_2, 1 hit
PS50022, FA58C_3, 1 hit
PS01209, LDLRA_1, 7 hits
PS50068, LDLRA_2, 9 hits
PS50092, TSP1, 25 hits
PS01208, VWFC_1, 1 hit
PS50184, VWFC_2, 2 hits
PS51233, VWFD, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

P98167-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLLPALLFGA AWALANGRWC EQTETVLVEE EVTPHQEDLV PCASLQHYQR 
        60         70         80         90        100
RGWRLDLTWS GRAGLCAIYK PPETRPAAWN RTVRACCPGW GGTHCTLALA 
       110        120        130        140        150
EASPEGHCFA TWLCNLGAGS VNASAGSLEE CCAQPWGHSW RDGRSQTCHS 
       160        170        180        190        200
CSNHSRLGST PSPAILQPLA GAVAQLWSQR QRPSATCATW SGFHYRTFDG 
       210        220        230        240        250
RHFHFLGRCT YLLAGAADAT WAVHLQPMGH CPQPGHCQLA RVMMGPEEVL 
       260        270        280        290        300
IRGENVTVNG RLVPEGASQL LPGLSLQWQG DWLVLSGGLG VVVRLDRSSS 
       310        320        330        340        350
VSISVDQELQ GQTQGLCGVY NGQPEDDFLE PGRGLAALAA TFGNSWRLPD 
       360        370        380        390        400
SELGCLDAVE AAQGCEDPLR GTETGTEAGQ LRAEAQDVCH QLLEGPFREC 
       410        420        430        440        450
HTQVPPAEYH EACLFAYCAG APAGSGRAER LEAVCATLAS YAQDCAARRI 
       460        470        480        490        500
AVRWRKPGFC ERLCPGGQLY SDCASACPPS CSAVGEGSEW SCGEECVSGC 
       510        520        530        540        550
ECPPGLFWDG ALCVPAARCP CYRRRRRYEP GDTVRQLCNP CECRDGRWLC 
       560        570        580        590        600
AQAPCAAECA VGGDGHYVTF DGRSFSFRGR AGCRFILVQD FAKRQLLIVL 
       610        620        630        640        650
EHGDCDAGSC LHAISVSLGD TLVQLRDSGV VLVDGQDVAL PWSAAGGLSV 
       660        670        680        690        700
SRASSSFLLL RWPGARILWG VSDPAAYITL DPHHAHQVQG LCGTFTRNQQ 
       710        720        730        740        750
DDFLTPAGDV ETSITAFASK FQVAGGGTCS LEACTPLSPC STHTERQVFA 
       760        770        780        790        800
EVACAILHGP TFQECHGLVD REAFHLRCLA AVCGCTPGRD CLCPVLAAYA 
       810        820        830        840        850
RRCAQEGALP SWRNQTFCPV LCPGGQEYQE CAPACDRNCG EPEDCGELDN 
       860        870        880        890        900
CVAGCNCPLG LLWDPEGQCV PPNLCPCQLG AHRYAPGSAT MKDCNHCVCQ 
       910        920        930        940        950
ERGLWNCTAH HCAPPRTFCP RELVYVPGAC LLTCDSLDAD RTCPPGSPGG 
       960        970        980        990       1000
CVCPPGTVLL EERCVPPELC PCRHGGQWYL PNAAIQEDCN LCVCQGQQWH 
      1010       1020       1030       1040       1050
CTGQRCDGRC RASGAPHYVT FDGLALTFPG ACEYLLVREA SGQFMVSAQN 
      1060       1070       1080       1090       1100
LPCGASGLTC TKALTVRLQG TVVHMLRGRA VMVNGVSVTP PKVYSGPGLS 
      1110       1120       1130       1140       1150
LHTAGLFLLL STRLGLTLLW DGGTRVPVQL SPQLRGRVAG LCGDFDGDAS 
      1160       1170       1180       1190       1200
NDLRSRQGVL EPTAELAAHS WRLGPLCPEP GDLPHPCAVN AHRAGWARAR 
      1210       1220       1230       1240       1250
CGVVLQPLFA RCHVEVPPQQ HYEQCVYDAC GCDSGGDCEC LCSAIATYAD 
      1260       1270       1280       1290       1300
ECARHGIHVR WRSQELCPLQ CERGQVYEAC GPTCPATCHD HRPEPGWPCR 
      1310       1320       1330       1340       1350
AVACVEGCFC PEGTLLHGGV CLEPAACPCE WGGSFFPPGT VLQKDCGNNC 
      1360       1370       1380       1390       1400
TCRESQWLCG DDGGRCVEPG PGCAEGETPC RESGHCVPHG WLCDNQDDCG 
      1410       1420       1430       1440       1450
DGSDEEGCAT RVCGEGQVSC CSGRCLPLVL LCDGQDDCGD GMDEQGCPCP 
      1460       1470       1480       1490       1500
QDSLTCADGH CLPPARLCDG HPDCPDGADE ESCLGQVDCA PGEVSCVDGT 
      1510       1520       1530       1540       1550
CLGAIQLCDG VWDCLDGGDE GPGHCPLPSL PTPPAGTLPG PSAVSWKLHL 
      1560       1570       1580       1590       1600
PPWPVSALRL PCGPLDFACG SGECAPRGWR CDGEEDCADG SDESGCDRPC 
      1610       1620       1630       1640       1650
APHHAPCARG SHCVAAEQLC DGVPHCPDGS DEDPGACERL QAPGGPNRTG 
      1660       1670       1680       1690       1700
LPCPEYSCPD GLCIGFQQVC DGQPDCELAG TAGPSPEEQG CGAWGPWSPW 
      1710       1720       1730       1740       1750
ELCSRTCGPG VQGWSRRCSP PSLPVLWHCP GPERQTRACF AAACPEDGVW 
      1760       1770       1780       1790       1800
TSWSRWSPCS EPCGGVTARH RECHPPQNGG RTCATLPGGP PSTRETRPCP 
      1810       1820       1830       1840       1850
QDGCPNVTCS GELVFHACVP CPLTCDDISG QATCPPDRPC GGPGCWCPAG 
      1860       1870       1880       1890       1900
QVLGAQGRCV WPRQCPCLVD GSRYWPGQRV KTDCQLCVCQ DGRPRRCQPS 
      1910       1920       1930       1940       1950
LDCAVNCGWS AWSPWAECLG PCGSRSVQWS FRSPNNPRPA GRGHQCRGLH 
      1960       1970       1980       1990       2000
RKARRCQTEP CEGCEQDGRV HRVGERWRAG PCRVCQCLHD GSARCSPYCP 
      2010       2020       2030       2040       2050
LGSCPQDWVL VEGVGESCCH CVPPGENQTV HPMATPVPAP TPSPQIGAPL 
      2060       2070       2080       2090       2100
ITYLLPPPGD PCYSPLGLAR LPEGSLPASS QQLEHPAWAA ILRPAPGAPG 
      2110       2120       2130       2140       2150
WSPVEHADTQ GHTPPPYLQL DLLQPRNLTG IIVQGAGSSD WLQVSSDGLH 
      2160       2170       2180       2190       2200
WHSYRDIQHG TQPAPQLFPK NWNGPSTVWM FARMVQARHV RVWPSDGHHQ 
      2210       2220       2230       2240       2250
AAPSSDANLD GPLRVELLGC EPAPLCLGVG HRCVSGECAP RGAPCDGVED 
      2260       2270       2280       2290       2300
CKDGSDEEGC VTPPAGAGRI ESTAWSSAPS SAQPGQLPPQ PSEGLAEAEA 
      2310       2320       2330       2340       2350
DHWHPGRGSP VPPTGKGPAS LGSEPHPSPG GSVQTVTPTS QPEAQALRPE 
      2360       2370       2380       2390       2400
MAAVTVLPPH PMVTPEVPAG RSTTPGPFPH VQCSPGQVPC EVLGCVELEQ 
      2410       2420       2430       2440       2450
LCDGREDCLD GSDERPCAWA AGTVPFTVPT TTLPGLPASR DLCSPSQLTC 
      2460       2470       2480       2490       2500
GSGECLPVER RCDLQLDCQD GSDENGCVDC GLAPWSGWSS CSRSCGLGLA 
      2510       2520       2530       2540       2550
FQRRELLRPP LPGGSCPPDR LRSQPCFVQA CPVAGAWAEW EAWGPCSVSC 
      2560       2570       2580       2590       2600
GGGHRSRRRS CMDPPPKNGG APCPGPPQER APCGLQPCAG GTDCGQGRVH 
      2610       2620       2630       2640       2650
VSAELCRKGL VPPCPPSCLD PEANRSCSGL CLEGCRCPPG LLLQDAGCLP 
      2660       2670       2680       2690       2700
LSECPCLVGE ELQQPGVPFL LDNCSRCVCE KGALLCEPGG CPVPCGWSAW 
      2710       2720       2730       2740       2750
SSWGPCDRSC GSGLRARFRS PSNPPAASGG APCEGQRQEL QACYSACGAE 
      2760       2770       2780       2790       2800
VPGWTPWAPW SACSQSCLVP GGGPALRSRS RLCPGPGDTS CIGEATEEEP 
      2810       2820       2830       2840       2850
CSPPVCLGLG VWGQWAAWSA CSAPCNGGVQ TRGRRCSASA PGDPGCQGPH 
      2860       2870       2880       2890       2900
SQTRDCNTQP CTAQCPGDMV FRSAEQCRWE GGPCPGLCLA RGPGVECTGV 
      2910       2920       2930       2940       2950
CTAGCACPTG LFLHNSSCLP PSQCPCQLRG QLYAPGAVAR LDSCSNCTCI 
      2960       2970       2980       2990       3000
SGEMVCASEP CPVACGWSPW TPWSLCSRSC NVGVRRRFRA GTAPPAAFGG 
      3010       3020       3030       3040       3050
AACQGPNMEA EFCSLRPCGG PAGEWGPWSP CSVPCGGGYR NRTRGSSGPS 
      3060       3070       3080       3090       3100
PVDFSTCGLQ PCAGPAPGVC PPGKRWLDCA QGPASCAELS APRGADQPCH 
      3110       3120       3130       3140       3150
PGCYCPSGML LLNNACVPTQ DCPCTHGGRL HPPGSAVLRP CENCSCVSGL 
      3160       3170       3180       3190       3200
ITNCTSWPCK EGQPTWSPWT PWSECSASCG PARRHKHRFC TRPPGGAPSS 
      3210       3220       3230       3240       3250
MAPPLLLSSV PPLCPGPEAE EEPCLLPECD RAGGWGPWGP WSSCSRSCGG 
      3260       3270       3280       3290       3300
GLRSRSRACD QPPPQGLGDY CEGPRAQGAA CQALPCPVTN CTAIEGAEYS 
      3310       3320       3330       3340       3350
ACGPPCPRSC DDLVHCVWHC QPGCYCPPGQ VLSADGTVHV QPGHCSCLDL 
      3360       3370       3380       3390       3400
LTGERHRPGA QLAKPDGCNY CTCSEGQLTC TDLPCPVPGA WCPWSEWTAC 
      3410       3420       3430       3440       3450
SQPCQGQTRT RSRACSCPAP QHGGAPCPGE AGEAGAQHQR ETCASTPECP 
      3460       3470       3480       3490       3500
VDGAWSPWGP WSPCEVCLGR SHRSRECSWP PTSEGGRPCP GGHRQSRPCQ 
      3510       3520       3530       3540       3550
GNSTQCTDCA GGQDLLPCGQ PCPRSCEDLS PGVECQPDSM GCQQPRCGCP 
      3560       3570       3580       3590       3600
PGQLSQDGLC VTPSQCRCQY QPGAMGIPEN QSRSAGSGLS SWESLEPGEV 
      3610       3620       3630       3640       3650
VTGPCDNCTC VAGILQCQEV PACSGLGLWG SWGPWEDCSV SCGGGEQLRF 
      3660       3670       3680       3690       3700
RRCPRPPCPG PARQSRTCRT QVCREAGCPA GRLYRECQPS EGCPFSCAHV 
      3710       3720       3730       3740       3750
TGQVGCFSAG CEEGCHCPEG TFLHRSACVQ ECPCVLTALW LQGLGAAGAD 
      3760       3770       3780       3790       3800
PGAHLSVLGE NGQPLGPGDE LGSGQSLRTG CHNCSCAHGK LSCSVEACSK 
      3810       3820       3830       3840       3850
AAGGFSPWGP WGPCSRSCGG LGTRTRSRQC VRPMPAPGGQ GCHGPHWDLE 
      3860       3870       3880       3890       3900
YCPSPECPGA AGSTAEPATG LPGGWGLWSP WSPCSGTCTD PAHPAWRSRS 
      3910       3920       3930       3940       3950
RLCLANCTGG AASQERPCNL PSCTELPLCP GPGCEAGNCS WTAWAPWEPC 
      3960       3970       3980       3990       4000
SRSCGVGQQR RLRAYHPPGP GGHWCPDVLT AYQERRFCNL RACPVPGGWS 
      4010       4020       4030       4040       4050
RWSPWSWCDR SCGGGRSLRS RSCSSPPPKN GGAPCVGERH HARLCNPTPC 
      4060       4070       4080       4090       4100
EEGCPAGMEV VSCANRCPRR CSDLQEGIVC QEDQACQQGC RCPEGSLEQD 
      4110       4120       4130       4140       4150
GGCVPLGHCE CTDAQGHSWA PGSQHQEACN NCTCRAGQLS CTAQPCPPPA 
      4160       4170       4180       4190       4200
HCAWSRWSAW SPCSRSCGPA GQQSRFRSST SGSWAPECRE EQSQSQPCPQ 
      4210       4220       4230       4240       4250
SPCPPLCLQG TRPRSLGDSW LQDGCQQCSC TPEGIICEDA ECAGLGAWTP 
      4260       4270       4280       4290       4300
WSPWSDCPVS CGGGNQVRTR VCVASAPPRG GSPCLGPDVQ SQRCGLWPCP 
      4310       4320       4330       4340       4350
ALPDTCSWGP WGPCSRSCGP GLASRSASCP CLLAEAEPAC NSTSPRLDTQ 
      4360       4370       4380       4390       4400
ACYAGPCLEE CVWSSWSSWT RCSCEVLVQQ RYRHQRPAPG GAGAGPPCTR 
      4410       4420       4430       4440       4450
LDGHFRPCLT GNCSEDSCAP PFEFQACGSP CTGLCATYLS PWLCQDLPPC 
      4460       4470       4480       4490       4500
QPGCYCPEGL LEQAGGCVPP EQCNCQHVSG EGAGVTLAPG DRLQLGCKEC 
      4510       4520       4530       4540       4550
ECQRGELQCT SQGCQGLLPL SGWSEWSPCG PCLPLGLLAP ASRAALEERW 
      4560       4570       4580       4590       4600
PQDTAGLSPT SAPTLASEQH RHRLCLDPET GRPWAGDPDL CTVPLSQQRL 
      4610       4620       4630       4640       4650
CPDPGACQDL CQWGPWGAWS PCQVPCSGGF RLRWREAGIP PGGGCRGPWA 
      4660       4670       4680       4690       4700
QTESCNMGPC PGESCEAQDT VPTPDCANQC PRSCVDLWDR VECLQGPCRP 
      4710       4720       4730       4740       4750
GCRCPPGQLV QDGHCVPVSS CRCGLPSPNA SWALAPAEVV RLDCRNCTCV 
      4760       4770       4780       4790       4800
NGSLACSSHE CPTLGPWSAW SNCSAPCGGG TTKRHRSCKE GPGVTPCQAQ 
      4810       4820       4830       4840       4850
DMEQQQDCNL QPCPECPPGQ VLSACAVSCP RLCSHLQPGT PCMQEPCQLG 
      4860       4870       4880       4890       4900
CDCPRGQLLH NGTCVPPAEC PCTQLSLPWG LTLTLEEQHR ELPPGTLLTQ 
      4910       4920       4930       4940       4950
NCTHCICQGG AFSCSLTDCQ ECPPGETWQQ VAPGELGPCE QTCREPNATE 
      4960       4970       4980       4990       5000
TQGNCSGRQA PGCVCQRGHF RSQEGPCVPV DLCECWHHGR PHPPGSEWQK 
      5010       5020       5030       5040       5050
ACESCRCVSG ESICTQHCPP LTCAQGETAV QEPGGCCPTC RQEAPEEQPV 
      5060       5070       5080       5090       5100
SCRHLTELRN LTKGACYLEQ VEVNYCSGHC PSSTNVLPEE PYLQSQCDCC 
      5110       5120       5130       5140 
SYRLDPENPV RILNLRCPGG RTELVVLPVI HSCQCSACQG GDFSER
Length:5,146
Mass (Da):543,593
Last modified:July 11, 2006 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i724C5FB8727E13DA
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AJ416457 mRNA Translation: CAC94914.1
X93922 mRNA Translation: CAA63815.1

NCBI Reference Sequences

More...RefSeqi		NP_777131.1, NM_174706.2

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...GeneIDi		282659

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		bta:282659

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ416457 mRNA Translation: CAC94914.1
X93922 mRNA Translation: CAA63815.1
RefSeqiNP_777131.1, NM_174706.2

3D structure databases

SMRiP98167
ModBaseiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000041504

Protein family/group databases

MEROPSiI08.954

Proteomic databases

PaxDbiP98167
PRIDEiP98167

Genome annotation databases

GeneIDi282659
KEGGibta:282659

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		243369

Phylogenomic databases

eggNOGiKOG1215, Eukaryota
KOG1216, Eukaryota
KOG3538, Eukaryota
KOG4475, Eukaryota
InParanoidiP98167
OrthoDBi12226at2759

Family and domain databases

CDDicd00057, FA58C, 1 hit
cd00112, LDLa, 9 hits
Gene3Di2.20.100.10, 25 hits
4.10.400.10, 9 hits
InterProiView protein in InterPro
IPR006207, Cys_knot_C
IPR000421, FA58C
IPR008979, Galactose-bd-like_sf
IPR036055, LDL_receptor-like_sf
IPR023415, LDLR_class-A_CS
IPR002172, LDrepeatLR_classA_rpt
IPR036201, Pacifastin_dom_sf
IPR030119, SCO-spondin
IPR036084, Ser_inhib-like_sf
IPR002919, TIL_dom
IPR000884, TSP1_rpt
IPR036383, TSP1_rpt_sf
IPR014853, Unchr_dom_Cys-rich
IPR001007, VWF_dom
IPR001846, VWF_type-D
PANTHERiPTHR11339:SF358, PTHR11339:SF358, 6 hits
PfamiView protein in Pfam
PF08742, C8, 3 hits
PF00754, F5_F8_type_C, 1 hit
PF00057, Ldl_recept_a, 8 hits
PF01826, TIL, 11 hits
PF00090, TSP_1, 22 hits
PF00093, VWC, 1 hit
PF00094, VWD, 3 hits
PRINTSiPR00261, LDLRECEPTOR
SMARTiView protein in SMART
SM00832, C8, 3 hits
SM00041, CT, 1 hit
SM00231, FA58C, 1 hit
SM00192, LDLa, 10 hits
SM00209, TSP1, 25 hits
SM00214, VWC, 5 hits
SM00215, VWC_out, 9 hits
SM00216, VWD, 3 hits
SUPFAMiSSF49785, SSF49785, 1 hit
SSF57283, SSF57283, 1 hit
SSF57424, SSF57424, 9 hits
SSF57567, SSF57567, 14 hits
SSF82895, SSF82895, 24 hits
PROSITEiView protein in PROSITE
PS01225, CTCK_2, 1 hit
PS01285, FA58C_1, 1 hit
PS01286, FA58C_2, 1 hit
PS50022, FA58C_3, 1 hit
PS01209, LDLRA_1, 7 hits
PS50068, LDLRA_2, 9 hits
PS50092, TSP1, 25 hits
PS01208, VWFC_1, 1 hit
PS50184, VWFC_2, 2 hits
PS51233, VWFD, 3 hits

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSSPO_BOVIN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P98167
Secondary accession number(s): Q8SPM4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: July 11, 2006
Last modified: February 23, 2022
This is version 142 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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