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UniProtKB - P96683 (YDFF_BACSU)
Protein
Uncharacterized HTH-type transcriptional regulator YdfF
Gene
ydfF
Organism
Bacillus subtilis (strain 168)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 32 – 55 | H-T-H motifPROSITE-ProRule annotationAdd BLAST | 24 |
GO - Molecular functioni
- cadmium ion sensor activity Source: GO_Central
- DNA binding Source: GO_Central
- DNA-binding transcription factor activity Source: GO_Central
- lead ion binding Source: GO_Central
GO - Biological processi
- regulation of gene expression Source: GO_Central
- response to cadmium ion Source: GO_Central
- response to lead ion Source: GO_Central
Keywordsi
Molecular function | DNA-binding, Repressor |
Biological process | Transcription, Transcription regulation |
Enzyme and pathway databases
BioCyci | BSUB:BSU05390-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized HTH-type transcriptional regulator YdfF |
Gene namesi | Name:ydfF Ordered Locus Names:BSU05390 |
Organismi | Bacillus subtilis (strain 168) |
Taxonomic identifieri | 224308 [NCBI] |
Taxonomic lineagei | Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000360996 | 1 – 226 | Uncharacterized HTH-type transcriptional regulator YdfFAdd BLAST | 226 |
Proteomic databases
PaxDbi | P96683 |
Structurei
3D structure databases
AlphaFoldDBi | P96683 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 1 – 92 | HTH arsR-typePROSITE-ProRule annotationAdd BLAST | 92 |
Phylogenomic databases
eggNOGi | COG0640, Bacteria |
InParanoidi | P96683 |
OMAi | CPCLDWS |
PhylomeDBi | P96683 |
Family and domain databases
CDDi | cd00090, HTH_ARSR, 1 hit |
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR011991, ArsR-like_HTH IPR001845, HTH_ArsR_DNA-bd_dom IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf |
PRINTSi | PR00778, HTHARSR |
SMARTi | View protein in SMART SM00418, HTH_ARSR, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS50987, HTH_ARSR_2, 1 hit |
i Sequence
Sequence statusi: Complete.
P96683-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MNPNIAKISS LLSDPSRSSI LLSLMDGRIH PAGELAYLAN IKPQTASFHL
60 70 80 90 100
NKLLEAKLIS VEKHGRHRYY RLADSDAANV IEQLLHIAPK AKVKSLKESK
110 120 130 140 150
EKKDLHFART CYDHLAGYVG VQMAHSLVEQ GMLKKVDLNF EVTSEGALFF
160 170 180 190 200
SKLGINEEQQ RNKRRAFARC CLDWSERQHH IAGALGNALL VRMLEEEWIV
210 220
RMPKTRAIRI TQSGKIAFEK HLNVKI
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB001488 Genomic DNA Translation: BAA19373.1 AL009126 Genomic DNA Translation: CAB12346.1 |
PIRi | D69780 |
RefSeqi | NP_388420.1, NC_000964.3 WP_003244115.1, NZ_JNCM01000031.1 |
Genome annotation databases
EnsemblBacteriai | CAB12346; CAB12346; BSU_05390 |
GeneIDi | 938084 |
KEGGi | bsu:BSU05390 |
PATRICi | fig|224308.179.peg.576 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB001488 Genomic DNA Translation: BAA19373.1 AL009126 Genomic DNA Translation: CAB12346.1 |
PIRi | D69780 |
RefSeqi | NP_388420.1, NC_000964.3 WP_003244115.1, NZ_JNCM01000031.1 |
3D structure databases
AlphaFoldDBi | P96683 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 224308.BSU05390 |
Proteomic databases
PaxDbi | P96683 |
Genome annotation databases
EnsemblBacteriai | CAB12346; CAB12346; BSU_05390 |
GeneIDi | 938084 |
KEGGi | bsu:BSU05390 |
PATRICi | fig|224308.179.peg.576 |
Phylogenomic databases
eggNOGi | COG0640, Bacteria |
InParanoidi | P96683 |
OMAi | CPCLDWS |
PhylomeDBi | P96683 |
Enzyme and pathway databases
BioCyci | BSUB:BSU05390-MONOMER |
Family and domain databases
CDDi | cd00090, HTH_ARSR, 1 hit |
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR011991, ArsR-like_HTH IPR001845, HTH_ArsR_DNA-bd_dom IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf |
PRINTSi | PR00778, HTHARSR |
SMARTi | View protein in SMART SM00418, HTH_ARSR, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS50987, HTH_ARSR_2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | YDFF_BACSU | |
Accessioni | P96683Primary (citable) accession number: P96683 Secondary accession number(s): Q797G8 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | January 20, 2009 |
Last sequence update: | May 1, 1997 | |
Last modified: | May 25, 2022 | |
This is version 128 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |