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UniProtKB - P96625 (YDCH_BACSU)
Protein
Uncharacterized HTH-type transcriptional regulator YdcH
Gene
ydcH
Organism
Bacillus subtilis (strain 168)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 61 – 84 | H-T-H motifPROSITE-ProRule annotationAdd BLAST | 24 |
GO - Molecular functioni
- DNA binding Source: UniProtKB-KW
- DNA-binding transcription factor activity Source: InterPro
GO - Biological processi
- regulation of transcription, DNA-templated Source: GO_Central
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Enzyme and pathway databases
BioCyci | BSUB:BSU04770-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized HTH-type transcriptional regulator YdcH |
Gene namesi | Name:ydcH Ordered Locus Names:BSU04770 |
Organismi | Bacillus subtilis (strain 168) |
Taxonomic identifieri | 224308 [NCBI] |
Taxonomic lineagei | Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000360729 | 1 – 147 | Uncharacterized HTH-type transcriptional regulator YdcHAdd BLAST | 147 |
Proteomic databases
PaxDbi | P96625 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 11 – 147 | HTH marR-typePROSITE-ProRule annotationAdd BLAST | 137 |
Phylogenomic databases
eggNOGi | COG1846, Bacteria |
InParanoidi | P96625 |
OMAi | PMMTSQV |
PhylomeDBi | P96625 |
Family and domain databases
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR000835, HTH_MarR-typ IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf |
Pfami | View protein in Pfam PF01047, MarR, 1 hit |
SMARTi | View protein in SMART SM00347, HTH_MARR, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS50995, HTH_MARR_2, 1 hit |
i Sequence
Sequence statusi: Complete.
P96625-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MEWHSKFSGP NTSPGFLLWQ ATQSWQRKVG KALAEFDLTH VQFVLLTSCK
60 70 80 90 100
YMIAHGETVT QKKLASFSQT NIMMVSEVVR TLEKKGFIER SKNPQDKREV
110 120 130 140
LLSLTEIGGE KVTAALPIVE KIDQAFFAAA MKKENFLSGL QELLKHE
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB001488 Genomic DNA Translation: BAA19314.1 AL009126 Genomic DNA Translation: CAB12284.1 |
PIRi | F69773 |
RefSeqi | NP_388358.1, NC_000964.3 WP_003246643.1, NZ_JNCM01000031.1 |
Genome annotation databases
EnsemblBacteriai | CAB12284; CAB12284; BSU_04770 |
GeneIDi | 939928 |
KEGGi | bsu:BSU04770 |
PATRICi | fig|224308.179.peg.506 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB001488 Genomic DNA Translation: BAA19314.1 AL009126 Genomic DNA Translation: CAB12284.1 |
PIRi | F69773 |
RefSeqi | NP_388358.1, NC_000964.3 WP_003246643.1, NZ_JNCM01000031.1 |
3D structure databases
AlphaFoldDBi | P96625 |
SMRi | P96625 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 224308.BSU04770 |
Proteomic databases
PaxDbi | P96625 |
Genome annotation databases
EnsemblBacteriai | CAB12284; CAB12284; BSU_04770 |
GeneIDi | 939928 |
KEGGi | bsu:BSU04770 |
PATRICi | fig|224308.179.peg.506 |
Phylogenomic databases
eggNOGi | COG1846, Bacteria |
InParanoidi | P96625 |
OMAi | PMMTSQV |
PhylomeDBi | P96625 |
Enzyme and pathway databases
BioCyci | BSUB:BSU04770-MONOMER |
Family and domain databases
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR000835, HTH_MarR-typ IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf |
Pfami | View protein in Pfam PF01047, MarR, 1 hit |
SMARTi | View protein in SMART SM00347, HTH_MARR, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS50995, HTH_MARR_2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | YDCH_BACSU | |
Accessioni | P96625Primary (citable) accession number: P96625 Secondary accession number(s): Q797K2 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | January 20, 2009 |
Last sequence update: | May 1, 1997 | |
Last modified: | May 25, 2022 | |
This is version 116 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |