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Entry version 122 (18 Sep 2019)
Sequence version 2 (16 Jun 2009)
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Protein

Plipastatin synthase subunit D

Gene

ppsD

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

This protein is a multifunctional enzyme, able to activate and polymerize the amino acids Pro, Gln and Tyr as part of the biosynthesis of the lipopeptide antibiotic plipastatin. The Tyr residue is further epimerized to the D-isomer form. The activation sites for these amino acids consist of individual domains.1 Publication

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

pantetheine 4'-phosphateCuratedNote: Binds 3 phosphopantetheines covalently.Curated

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionMultifunctional enzyme, Transferase
Biological processAntibiotic biosynthesis

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
BSUB:BSU18310-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Plipastatin synthase subunit D (EC:2.3.1.-)
Alternative name(s):
Peptide synthase 4
Including the following 3 domains:
ATP-dependent proline adenylase
Short name:
ProA 1
Alternative name(s):
Proline activase 1
ATP-dependent glutamine adenylase
Short name:
GlnA
Alternative name(s):
Glutamine activase
ATP-dependent tyrosine adenylase 2
Short name:
TyrA 2
Alternative name(s):
Tyrosine activase 2
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ppsD
Synonyms:pps4
Ordered Locus Names:BSU18310
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBacillus subtilis (strain 168)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri224308 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001570 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003608441 – 3603Plipastatin synthase subunit DAdd BLAST3603

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1001O-(pantetheine 4'-phosphoryl)serinePROSITE-ProRule annotation1
Modified residuei2032O-(pantetheine 4'-phosphoryl)serinePROSITE-ProRule annotation1
Modified residuei3069O-(pantetheine 4'-phosphoryl)serinePROSITE-ProRule annotation1

Keywords - PTMi

Phosphopantetheine, Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
P94459

PRoteomics IDEntifications database

More...
PRIDEi
P94459

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
224308.BSU18310

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
P94459

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini966 – 1041Carrier 1PROSITE-ProRule annotationAdd BLAST76
Domaini1997 – 2072Carrier 2PROSITE-ProRule annotationAdd BLAST76
Domaini3034 – 3108Carrier 3PROSITE-ProRule annotationAdd BLAST75

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni7 – 1043Domain 1 (proline-activating)Add BLAST1037
Regioni7 – 306Condensation 1Add BLAST300
Regioni490 – 889Adenylation 1Add BLAST400
Regioni1053 – 2069Domain 2 (glutamine-activating)Add BLAST1017
Regioni1053 – 1334Condensation 2Add BLAST282
Regioni1521 – 1924Adenylation 2Add BLAST404
Regioni2084 – 3596Domain 3 (proline-activating)Add BLAST1513
Regioni2084 – 2374Condensation 3Add BLAST291
Regioni2560 – 2956Adenylation 3Add BLAST397
Regioni3116 – 3596EpimerizationAdd BLAST481

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi2178 – 2181Poly-Ala4

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4105CEY Bacteria
COG0318 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000229991

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
P94459

KEGG Orthology (KO)

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KOi
K15667

Identification of Orthologs from Complete Genome Data

More...
OMAi
YIMPAYL

Database for complete collections of gene phylogenies

More...
PhylomeDBi
P94459

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.1200.10, 2 hits
3.30.559.10, 4 hits
3.40.50.12780, 3 hits
3.40.50.1820, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR010071 AA_adenyl_domain
IPR029058 AB_hydrolase
IPR036736 ACP-like_sf
IPR025110 AMP-bd_C
IPR020845 AMP-binding_CS
IPR000873 AMP-dep_Synth/Lig
IPR042099 AMP-dep_Synthh-like_sf
IPR023213 CAT-like_dom_sf
IPR001242 Condensatn
IPR010060 NRPS_synth
IPR020806 PKS_PP-bd
IPR009081 PP-bd_ACP
IPR006162 Ppantetheine_attach_site

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00501 AMP-binding, 3 hits
PF13193 AMP-binding_C, 3 hits
PF00668 Condensation, 4 hits
PF00550 PP-binding, 3 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00823 PKS_PP, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF47336 SSF47336, 3 hits

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR01733 AA-adenyl-dom, 3 hits
TIGR01720 NRPS-para261, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00455 AMP_BINDING, 3 hits
PS50075 CARRIER, 3 hits
PS00012 PHOSPHOPANTETHEINE, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

P94459-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTKANSIQDI YPLSYMQEGM LFHSLLQKDS QAYVEQASFT IEGKVNPQFF
60 70 80 90 100
QNSINALVER HDIFRTIFIS QNVSSPQQVV LRERNVIVLE EDITHLNEAE
110 120 130 140 150
QSQFIEQWKE KDRDRGFHLQ KDVLMRIALI QTGESQYSCI WTFHHIMMDG
160 170 180 190 200
WCLSIVLKEF LHIYASYVNA SPITLEPVQP YGKYIKWLME QDKEQAVSYW
210 220 230 240 250
DHYLSGHEQQ TVLPKQKKTK GKSRQEHVTF SFSKEESSRL SELAAREEVT
260 270 280 290 300
LSTIFHTIWG ILLQKYNNND DAVFGSVISG RPAEIEGIEH MVGLFINTMP
310 320 330 340 350
VRVQGAKTPF LQLIKDMQKD RLAAEAYSYH PLYEIQSRSA VKQGLIDHIL
360 370 380 390 400
VFENYPVQQE IQMLNKQEHA SDLFQIHNFT VADETNYSFY LMVAPGEEIH
410 420 430 440 450
IKMNYDAEQH DRSFVLSVKE HLLNAVSQIL NNPNLPPEEI DITTDTEKRQ
460 470 480 490 500
LIGEITDQTP VYETIHAMFE KQAEKTPDAH AVIDQACSLT YRELNKAANR
510 520 530 540 550
LARHLRMKGV VRQEPVAIMM ERSAAFITGV LGILKAGGAI VPVDPHYPAD
560 570 580 590 600
RIRYILHDCG CSHVVSQAHL PSSLEDNYII THPEDIESKV DGSNIKSVNN
610 620 630 640 650
ADDLLYMIYT SGTTGKPKGV QFEHRNMANL LKFEYTHSGI DFEADVLQFA
660 670 680 690 700
TPSFDVCYQE IFSALLKGGT LHIVPEAIKR DVPQLFAFIN KHQTNIVFLP
710 720 730 740 750
TAFIKMIFSE RELANSFPDG VKHLIAAGEQ LMISDLFQDV LRKRGIHLHN
760 770 780 790 800
HYGPSETHVV STYTIHPGDP IPELPPIGKP IGCTDLYILN HQKQLQPCGV
810 820 830 840 850
PGELYISGAS VARGYVNHDK LTSDKFSSDP FKPDVIMYRT GDLARRLEDG
860 870 880 890 900
NIEYIGRADN QVKIRGYRIE PQEIEVTLMN HPDISEAAIL IWQDQNGEHE
910 920 930 940 950
LCAYYCSVQK LNTIDLRSYM ASELPEYMIP AKWIWVDSIP LTPNGKVDRA
960 970 980 990 1000
ALPEPDASIS GNPYTAPRNL LEAKLSQLFE DVLKNGHIGI QDNFFDNGGH
1010 1020 1030 1040 1050
SLKATVLMSR IAKEFHVQVS LKDIFAHPTV EGLALIIREA EQNLYAAIEP
1060 1070 1080 1090 1100
AEKRDTYPVS SAQKRIYVLQ QLDEGVAYNM PAVLELEGAL DVAKLSAVCK
1110 1120 1130 1140 1150
ELISRHEPLR TSFVSGADDE PVQRIHTEVP FTLSKETTIE GFVRPFDLSQ
1160 1170 1180 1190 1200
APLFRAGLIE VSNEKHVLLV DMHHIISDGV SVQLLIREFT DLYANRQLKP
1210 1220 1230 1240 1250
LRIQYKDYAV WQQKFKKGDS YQKQETYWQQ QFSGDLPILE LPTDKRRPAE
1260 1270 1280 1290 1300
RQFIGGKVTF QLDKEITARI KRLAHKNRST LYMTLLALYS AFLSRLSGQD
1310 1320 1330 1340 1350
DIVIGSPIAG RPHADLEAVL GMFVNTLALR TRPAGNKTFE EFLKEVRQTA
1360 1370 1380 1390 1400
LEAYEHQDYP FEELVDKLGV QREMSRNPLF DTTLVLQNME QQKLKMNDVQ
1410 1420 1430 1440 1450
LQWNDLEHPI SKFDISLYVT EHDSELFCQF EYSTALFEKE TIQRWASLFT
1460 1470 1480 1490 1500
TLVEHTAASP ETELDNIPIL TKEEERDFIE SCHLFEETGY SMNQTLHYAL
1510 1520 1530 1540 1550
EQQAEKTPDQ AAVIFEDGVM TYKELNEQAN RIAWELIGRG VKPETTVAII
1560 1570 1580 1590 1600
GKRSPEMLLG IYGILKAGGA YLPIDPDYPE ERISFLLEDS GTNILLLQSA
1610 1620 1630 1640 1650
GLHVPEFTGE IVYLNQTNSG LAHRLSNPNV DVLPQSLAYV IYTSGSTGMP
1660 1670 1680 1690 1700
KGVEIEHRSA VNFLNSLQSR YQLKHSDMIM HKTSYSFDAS IWELFWWPYA
1710 1720 1730 1740 1750
GASVYLLPQG GEKEPEVIAK AIEEQKITAM HFVPSMLHAF LEHIKYRSVP
1760 1770 1780 1790 1800
IKTNRLKRVF SGGEQLGTHL VSRFYELLPN VSITNSYGPT EATVEAAFFD
1810 1820 1830 1840 1850
CPPHEKLERI PIGKPVHHVR LYLLNQNQRM LPVGCIGELY IAGAGVARGY
1860 1870 1880 1890 1900
LNRPALTEER FLEDPFYPGE RMYKTGDVAR WLPDGNVEFL GRTDDQVKIR
1910 1920 1930 1940 1950
GYRIEPGEIE AALRSIEGVR EAAVTVRTDS GEPELCAYVE GLQRNEVRAQ
1960 1970 1980 1990 2000
LERLLPGYMV PAYMIEMEQW PVTPSGKLDR NALPAPGGAA DAETYTAPRN
2010 2020 2030 2040 2050
VTEMKLSQLW EDVLKNGPVG IHDNFFDRGG HSLKATALVS RITKEFDVQV
2060 2070 2080 2090 2100
PLKDVFAHPT VEGLATVIRE GTDSPYEAIK PAEKQETYPV SSAQKRIYVL
2110 2120 2130 2140 2150
QQLEDGGTGY NMPAVLELEG KLNPERMDRA FQELIKRHES LRTSFEQDEG
2160 2170 2180 2190 2200
GDPVQRIHDE VPFTLQTTVL GARTEQEAAA AFIKPFDLSQ APLFRAQIVK
2210 2220 2230 2240 2250
VSDERHLLLV DMHHIISDGV SVNILIQEFG ELYNNRKLPA LRIQYKDYAV
2260 2270 2280 2290 2300
WQEGFKTGDA YKMQEAYWLK QLEGELPVLD LPADHARPPV RSFAGDKVSF
2310 2320 2330 2340 2350
TLEPEVASGL HKLARENGST LYMVLLAAYT AFLSRLSGQE DIIVGSPIAG
2360 2370 2380 2390 2400
RPHKDLEPIL GMFVNTLALR TRPEGGKPFV QYLQEVRETA LEAFEHQNYP
2410 2420 2430 2440 2450
FEELVDKLEL TRDMSRNPVF DAMLVVQNND YEPLHLHDLQ MKPAQVSHLV
2460 2470 2480 2490 2500
SKFDLTLQAS EGDGNIHFLF EYSTALFEKT TIERWASHLT NVLSIIGKNP
2510 2520 2530 2540 2550
KVTLNHIDIL TQEERHQLLN EFNTGQANQY GVQTISQLFE QQAARTPKAS
2560 2570 2580 2590 2600
ALVSGDKTLT YQELDEWSNG IARALRSRGV KPDTPVGIMM HRSFSMIASI
2610 2620 2630 2640 2650
LGVWKAGGCY VPIDPEYPKE RKRYILSDSG TKLLMTINEA DLGVLADFEG
2660 2670 2680 2690 2700
EILTIESVEE DDKSPLPQMS SAHHLAYIIY TSGTTGRPKG VMVEHKGIAN
2710 2720 2730 2740 2750
TLQWRRNAYA FNETDTILQL FSFSFDGFIT SMFTPLLSGA KAVLLHEEEA
2760 2770 2780 2790 2800
KDILAIKHQL SRQRITHMII VPVLYRALLD VVQPEDVKTL RVVTLAGEAA
2810 2820 2830 2840 2850
DRELIARSLA ICPHTELANE YGPTENSVAT TVMRHMEKQA YVSIGQPIDG
2860 2870 2880 2890 2900
TQVLILNSNH QLQPIGVAGE LCIAGTGLAR GYVNLPELTE RAFTQNPFKP
2910 2920 2930 2940 2950
EARMYRTGDA ARWMADGTLE YLGRIDDQVK IRGYRVETKE IESVIRCIKG
2960 2970 2980 2990 3000
VKDAAVVAHV TASGQTELSA YVVTKPGLST NAVRSELQNK LPVFMHPAFI
3010 3020 3030 3040 3050
EKLDSLPLSP NGKLDRGALP KPVYNHEGER PFLPPSSKME QILADIWKEV
3060 3070 3080 3090 3100
LGAEKIGTAD SFFELGGDSI KALQVSARLH RIGKQMAVKD LFSHPTIQEL
3110 3120 3130 3140 3150
AAYIRDSDTS SSQAAVEGDV QWSPVQKWFL SQDIKEKHHF NQSVMLHRST
3160 3170 3180 3190 3200
SVQEDALRKT LKAITCHHDA LRMVFTQNEQ GKWDQYNRPL SHSDDALYGL
3210 3220 3230 3240 3250
QMIDLSAPDG TDGNRPYEPL IKRHVLDIQQ KMDLKNGPLL QAGLFHTIDG
3260 3270 3280 3290 3300
DFLFLSAHHL VVDGISWRVL LEDLALGYRQ AAGGEDIKLP PKTSSFKAYA
3310 3320 3330 3340 3350
KKLSDYAESQ QLMKQLKYWR EAEEYQTEAL PFDQIDGTRA HEGQRSTISF
3360 3370 3380 3390 3400
TLNDKETAAL LKDANSAYNT DTQDMLLASV ILALRHWTNQ SAFKLSLEGH
3410 3420 3430 3440 3450
GREDVLKGID VSRTIGWFTA IYPLLIKLNA DLPDSEESMV HVLKTTKDTL
3460 3470 3480 3490 3500
RRVPDKGFGY GVIKYLTPPG KKDINFTGAP EISFNYLGQF ESGRTAEVPE
3510 3520 3530 3540 3550
EDAFSFSPLG AGGDISTTWN REQSLDISAI AAEGKLTVNM TYDNARFQRK
3560 3570 3580 3590 3600
TIEQLSETCR QFLLQLIEHC QNKSETEKTI SDFDDQELTE DALQEIADML

SFH
Length:3,603
Mass (Da):406,812
Last modified:June 16, 2009 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i9A30389D45FEC274
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti46N → T in CAA84363 (PubMed:7711903).Curated1
Sequence conflicti1293L → W in CAA84363 (PubMed:7711903).Curated1
Sequence conflicti1303V → A in CAA84363 (PubMed:7711903).Curated1
Sequence conflicti1324V → A in CAA84363 (PubMed:7711903).Curated1
Sequence conflicti1530N → T in CAA84363 (PubMed:7711903).Curated1
Sequence conflicti1533A → S in CAA84363 (PubMed:7711903).Curated1
Sequence conflicti1743H → Q in CAA84363 (PubMed:7711903).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
Z34883 Genomic DNA Translation: CAA84363.1
AL009126 Genomic DNA Translation: CAB13714.2

Protein sequence database of the Protein Information Resource

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PIRi
D69681

NCBI Reference Sequences

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RefSeqi
NP_389713.2, NC_000964.3
WP_009967354.1, NZ_CP019663.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
CAB13714; CAB13714; BSU18310

Database of genes from NCBI RefSeq genomes

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GeneIDi
940013

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
bsu:BSU18310

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|224308.43.peg.1941

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z34883 Genomic DNA Translation: CAA84363.1
AL009126 Genomic DNA Translation: CAB13714.2
PIRiD69681
RefSeqiNP_389713.2, NC_000964.3
WP_009967354.1, NZ_CP019663.1

3D structure databases

SMRiP94459
ModBaseiSearch...

Protein-protein interaction databases

STRINGi224308.BSU18310

Proteomic databases

PaxDbiP94459
PRIDEiP94459

Genome annotation databases

EnsemblBacteriaiCAB13714; CAB13714; BSU18310
GeneIDi940013
KEGGibsu:BSU18310
PATRICifig|224308.43.peg.1941

Phylogenomic databases

eggNOGiENOG4105CEY Bacteria
COG0318 LUCA
HOGENOMiHOG000229991
InParanoidiP94459
KOiK15667
OMAiYIMPAYL
PhylomeDBiP94459

Enzyme and pathway databases

BioCyciBSUB:BSU18310-MONOMER

Family and domain databases

Gene3Di1.10.1200.10, 2 hits
3.30.559.10, 4 hits
3.40.50.12780, 3 hits
3.40.50.1820, 1 hit
InterProiView protein in InterPro
IPR010071 AA_adenyl_domain
IPR029058 AB_hydrolase
IPR036736 ACP-like_sf
IPR025110 AMP-bd_C
IPR020845 AMP-binding_CS
IPR000873 AMP-dep_Synth/Lig
IPR042099 AMP-dep_Synthh-like_sf
IPR023213 CAT-like_dom_sf
IPR001242 Condensatn
IPR010060 NRPS_synth
IPR020806 PKS_PP-bd
IPR009081 PP-bd_ACP
IPR006162 Ppantetheine_attach_site
PfamiView protein in Pfam
PF00501 AMP-binding, 3 hits
PF13193 AMP-binding_C, 3 hits
PF00668 Condensation, 4 hits
PF00550 PP-binding, 3 hits
SMARTiView protein in SMART
SM00823 PKS_PP, 2 hits
SUPFAMiSSF47336 SSF47336, 3 hits
TIGRFAMsiTIGR01733 AA-adenyl-dom, 3 hits
TIGR01720 NRPS-para261, 1 hit
PROSITEiView protein in PROSITE
PS00455 AMP_BINDING, 3 hits
PS50075 CARRIER, 3 hits
PS00012 PHOSPHOPANTETHEINE, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPPSD_BACSU
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P94459
Secondary accession number(s): Q796G3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: June 16, 2009
Last modified: September 18, 2019
This is version 122 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
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