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Entry version 165 (02 Jun 2021)
Sequence version 2 (16 May 2003)
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Protein

Histone-lysine N-methyltransferase CLF

Gene

CLF

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes (PubMed:17881378).

Required to regulate floral development by repressing the AGAMOUS homeotic gene in leaves, inflorescence stems and flowers (PubMed:17881378).

Together with ATX1, modulates AG nucleosome methylation statement (PubMed:17881378).

Regulates the antero-posterior organization of the endosperm, as well as the division and elongation rates of leaf cells. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development.

5 Publications

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei866S-adenosyl-L-methioninePROSITE-ProRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionChromatin regulator, Developmental protein, Methyltransferase, Repressor, Transferase
Biological processDifferentiation, Flowering, Transcription, Transcription regulation
LigandS-adenosyl-L-methionine

Enzyme and pathway databases

BRENDA Comprehensive Enzyme Information System

More...
BRENDAi
2.1.1.356, 399

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Histone-lysine N-methyltransferase CLF2 Publications (EC:2.1.1.-PROSITE-ProRule annotation)
Alternative name(s):
Polycomb group protein CURLY LEAF2 Publications
Protein INCURVATA 11 Publication
Protein SET DOMAIN GROUP 11 Publication
Protein photoperiod insensitive flowering
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CLF2 Publications
Synonyms:ICU11 Publication, PIF1, PIF2, SDG11 Publication, SET11 Publication
Ordered Locus Names:At2g23380Imported
ORF Names:F26B6.3Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT2G23380

The Arabidopsis Information Resource

More...
TAIRi
locus:2005501, AT2G23380

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Misexpression of AGAMOUS, recognizable phenotypes (e.g. curly leaves, and early flowering time) and loss of H3K27me3 histone H3-tail marks (PubMed:17881378). Double mutant plants atx1 clf exhibits normal leaf-phenotype and flowering time (PubMed:17881378).1 Publication

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002139951 – 902Histone-lysine N-methyltransferase CLFAdd BLAST902

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
P93831

PRoteomics IDEntifications database

More...
PRIDEi
P93831

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
246546

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
P93831

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Strongly expressed throughout the apical meristem, leaf primordia, and leaves of 7-8 day-old seedling. Weakly expressed in the vasculature of hypocotyl. Strongly expressed throughout the young stages 1 and 2 floral meristems that arose on the flanks of the apex. In stage 3 and 4 flowers, it is expressed in the emerging sepal primordia and in the dome of the floral meristem. During stages 6 and 7, it is strongly expressed in developing petal and stamen, and weakly expressed in the sepals. Late in floral development, at stage 12, it is weakly expressed in all floral whorls, and expressed at intermediate level in petals and ovules.1 Publication

<p>This subsection of the 'Expression' section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified 'at the protein level'.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

Expressed in all four whorls throughout flower development.

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
P93831, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
P93831, AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Probable component of a PcG complex. In plants, PcG complexes are probably composed of a member of the EZ family (CLF or MEA), FIE, and a member of the VEFS family (FIS2, VRN2 or EMF2) (By similarity).

Interacts with FIE (PubMed:14871310).

Interacts with RING1A (PubMed:19097900). Binds to ALP1 (PubMed:26642436).

Interacts with BLI (PubMed:20647345). Binds to ATX1 in the nucleus (PubMed:17881378).

By similarity5 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Hide details

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
2222, 17 interactors

Database of interacting proteins

More...
DIPi
DIP-31377N

Protein interaction database and analysis system

More...
IntActi
P93831, 14 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT2G23380.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini531 – 581SANTSequence analysisAdd BLAST51
Domaini638 – 737CXCPROSITE-ProRule annotationAdd BLAST100
Domaini752 – 867SETPROSITE-ProRule annotationAdd BLAST116

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 33DisorderedSequence analysisAdd BLAST33
Regioni73 – 107DisorderedSequence analysisAdd BLAST35
Regioni335 – 522DisorderedSequence analysisAdd BLAST188
Regioni875 – 902DisorderedSequence analysisAdd BLAST28

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 16Polar residuesSequence analysisAdd BLAST16
Compositional biasi17 – 33Basic and acidic residuesSequence analysisAdd BLAST17
Compositional biasi82 – 97Basic and acidic residuesSequence analysisAdd BLAST16
Compositional biasi335 – 400Polar residuesSequence analysisAdd BLAST66
Compositional biasi405 – 419Basic residuesSequence analysisAdd BLAST15
Compositional biasi420 – 436Basic and acidic residuesSequence analysisAdd BLAST17
Compositional biasi463 – 494Polar residuesSequence analysisAdd BLAST32

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1079, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_011060_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
P93831

Identification of Orthologs from Complete Genome Data

More...
OMAi
DESICRQ

Database of Orthologous Groups

More...
OrthoDBi
875190at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
P93831

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR026489, CXC_dom
IPR025778, Hist-Lys_N-MeTrfase
IPR041355, Pre-SET_CXC
IPR001214, SET_dom
IPR033467, Tesmin/TSO1-like_CXC

The PANTHER Classification System

More...
PANTHERi
PTHR45747:SF15, PTHR45747:SF15, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF18264, preSET_CXC, 1 hit
PF00856, SET, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01114, CXC, 1 hit
SM00317, SET, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51633, CXC, 1 hit
PS51576, SAM_MT43_EZ, 1 hit
PS50280, SET, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

P93831-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASEASPSSS ATRSEPPKDS PAEERGPASK EVSEVIESLK KKLAADRCIS
60 70 80 90 100
IKKRIDENKK NLFAITQSFM RSSMERGGSC KDGSDLLVKR QRDSPGMKSG
110 120 130 140 150
IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF
160 170 180 190 200
LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
210 220 230 240 250
PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES
260 270 280 290 300
GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
310 320 330 340 350
APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP
360 370 380 390 400
TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
410 420 430 440 450
KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD
460 470 480 490 500
AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
510 520 530 540 550
VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF
560 570 580 590 600
GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
610 620 630 640 650
NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR
660 670 680 690 700
QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
710 720 730 740 750
RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ
760 770 780 790 800
QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
810 820 830 840 850
ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI
860 870 880 890 900
FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK

LA
Length:902
Mass (Da):100,370
Last modified:May 16, 2003 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i90B45ED27D219D64
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1P8B187A0A1P8B187_ARATH
SET domain-containing protein
CLF CURLY LEAF, ICU1, INCURVATA 1, SDG1, SET1
675Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti225S → N in CAA71599 (PubMed:10617197).Curated1
Sequence conflicti332T → P in CAA71599 (PubMed:10617197).Curated1
Sequence conflicti415K → N in CAA71599 (PubMed:10617197).Curated1
Sequence conflicti658K → Q in CAA71599 (PubMed:10617197).Curated1
Sequence conflicti674C → Y in CAA71599 (PubMed:10617197).Curated1
Sequence conflicti761V → I in CAA71599 (PubMed:10617197).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
Y10580 mRNA Translation: CAA71599.1
AC003040 Genomic DNA Translation: AAC23781.1
CP002685 Genomic DNA Translation: AEC07449.1

Protein sequence database of the Protein Information Resource

More...
PIRi
T01127

NCBI Reference Sequences

More...
RefSeqi
NP_179919.1, NM_127902.6

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT2G23380.1; AT2G23380.1; AT2G23380

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
816870

Gramene; a comparative resource for plants

More...
Gramenei
AT2G23380.1; AT2G23380.1; AT2G23380

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT2G23380

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y10580 mRNA Translation: CAA71599.1
AC003040 Genomic DNA Translation: AAC23781.1
CP002685 Genomic DNA Translation: AEC07449.1
PIRiT01127
RefSeqiNP_179919.1, NM_127902.6

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGRIDi2222, 17 interactors
DIPiDIP-31377N
IntActiP93831, 14 interactors
STRINGi3702.AT2G23380.1

PTM databases

iPTMnetiP93831

Proteomic databases

PaxDbiP93831
PRIDEiP93831
ProteomicsDBi246546

Genome annotation databases

EnsemblPlantsiAT2G23380.1; AT2G23380.1; AT2G23380
GeneIDi816870
GrameneiAT2G23380.1; AT2G23380.1; AT2G23380
KEGGiath:AT2G23380

Organism-specific databases

AraportiAT2G23380
TAIRilocus:2005501, AT2G23380

Phylogenomic databases

eggNOGiKOG1079, Eukaryota
HOGENOMiCLU_011060_0_0_1
InParanoidiP93831
OMAiDESICRQ
OrthoDBi875190at2759
PhylomeDBiP93831

Enzyme and pathway databases

BRENDAi2.1.1.356, 399

Miscellaneous databases

Protein Ontology

More...
PROi
PR:P93831

Gene expression databases

ExpressionAtlasiP93831, baseline and differential
GenevisibleiP93831, AT

Family and domain databases

InterProiView protein in InterPro
IPR026489, CXC_dom
IPR025778, Hist-Lys_N-MeTrfase
IPR041355, Pre-SET_CXC
IPR001214, SET_dom
IPR033467, Tesmin/TSO1-like_CXC
PANTHERiPTHR45747:SF15, PTHR45747:SF15, 1 hit
PfamiView protein in Pfam
PF18264, preSET_CXC, 1 hit
PF00856, SET, 1 hit
SMARTiView protein in SMART
SM01114, CXC, 1 hit
SM00317, SET, 1 hit
PROSITEiView protein in PROSITE
PS51633, CXC, 1 hit
PS51576, SAM_MT43_EZ, 1 hit
PS50280, SET, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCLF_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P93831
Secondary accession number(s): O80455
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 16, 2003
Last sequence update: May 16, 2003
Last modified: June 2, 2021
This is version 165 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
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