UniProtKB - P93014 (RR5_ARATH)
Protein
30S ribosomal protein S5, chloroplastic
Gene
rps5
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
Binds directly to 16S ribosomal RNA.By similarity
GO - Molecular functioni
- mRNA binding Source: TAIR
- rRNA binding Source: UniProtKB-KW
- structural constituent of ribosome Source: GO_Central
GO - Biological processi
- adaxial/abaxial pattern specification Source: TAIR
- chloroplast rRNA processing Source: TAIR
- plastid translation Source: TAIR
- response to cadmium ion Source: TAIR
- response to cold Source: TAIR
- translation Source: GO_Central
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 30S ribosomal protein S5, chloroplastic |
Gene namesi | Name:rps5 Ordered Locus Names:At2g33800 ORF Names:T1B8.10 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT2G33800 |
TAIRi | locus:2057645, AT2G33800 |
Subcellular locationi
Chloroplast
Chloroplast
- chloroplast Source: TAIR
- chloroplast stroma Source: TAIR
- chloroplast thylakoid Source: TAIR
- chloroplast thylakoid membrane Source: TAIR
Endoplasmic reticulum
- endoplasmic reticulum Source: TAIR
Mitochondrion
- mitochondrial small ribosomal subunit Source: GO_Central
Nucleus
- nucleus Source: TAIR
Other locations
- thylakoid Source: TAIR
Keywords - Cellular componenti
Chloroplast, PlastidPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transit peptidei | 1 – ? | ChloroplastSequence analysis | ||
ChainiPRO_0000248271 | ? – 303 | 30S ribosomal protein S5, chloroplastic |
Proteomic databases
PaxDbi | P93014 |
PRIDEi | P93014 |
ProteomicsDBi | 228197 |
2D gel databases
World-2DPAGEi | 0003:P93014 |
PTM databases
MetOSitei | P93014 |
Expressioni
Gene expression databases
ExpressionAtlasi | P93014, baseline and differential |
Genevisiblei | P93014, AT |
Interactioni
Subunit structurei
Part of the 30S ribosomal subunit.
Protein-protein interaction databases
BioGRIDi | 3294, 4 interactors |
IntActi | P93014, 1 interactor |
STRINGi | 3702.AT2G33800.1 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 147 – 210 | S5 DRBMAdd BLAST | 64 |
Sequence similaritiesi
Belongs to the universal ribosomal protein uS5 family.Curated
Keywords - Domaini
Transit peptidePhylogenomic databases
eggNOGi | KOG0877, Eukaryota |
HOGENOMi | CLU_075168_1_0_1 |
InParanoidi | P93014 |
OMAi | MRQFREV |
OrthoDBi | 1504411at2759 |
PhylomeDBi | P93014 |
Family and domain databases
Gene3Di | 3.30.230.10, 1 hit |
HAMAPi | MF_01307_B, Ribosomal_S5_B, 1 hit |
InterProi | View protein in InterPro IPR000851, Ribosomal_S5 IPR005712, Ribosomal_S5_bac-type IPR005324, Ribosomal_S5_C IPR020568, Ribosomal_S5_D2-typ_fold IPR014721, Ribosomal_S5_D2-typ_fold_subgr IPR013810, Ribosomal_S5_N IPR018192, Ribosomal_S5_N_CS |
PANTHERi | PTHR13718, PTHR13718, 1 hit |
Pfami | View protein in Pfam PF00333, Ribosomal_S5, 1 hit PF03719, Ribosomal_S5_C, 1 hit |
SUPFAMi | SSF54211, SSF54211, 1 hit |
TIGRFAMsi | TIGR01021, rpsE_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00585, RIBOSOMAL_S5, 1 hit PS50881, S5_DSRBD, 1 hit |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
P93014-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MATASALSSL SSLSLHTRTS SLISSSSTKS IVSFSSFLNR RFSSLTLVKA
60 70 80 90 100
SSTDTETIFF EDETPEITAN VVFDPPIAPE GFVSPPYFDE GSDETEEEIA
110 120 130 140 150
TAFEELYGPA YSGESMLGKD IYVMDSKHKK SSGIGGKPKK DKIRDGFEER
160 170 180 190 200
VVQVRRVTKV VKGGKQLKFR AIVVVGDKQG NVGVGCAKAK EVVAAVQKSA
210 220 230 240 250
IDARRNIVQV PMTKYSTFPH RSEGDYGAAK VMLRPASPGT GVIAGGAVRI
260 270 280 290 300
VLEMAGVENA LGKQLGSNNA LNNARATLAA VQQMRQFRDV AQERGIPMEE
LWK
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U78721 Genomic DNA Translation: AAC69132.1 CP002685 Genomic DNA Translation: AEC08888.1 AY093289 mRNA Translation: AAM13288.1 AY054523 mRNA Translation: AAK96714.1 AY087734 mRNA Translation: AAM65271.1 |
PIRi | G84749 |
RefSeqi | NP_180936.1, NM_128939.4 |
Genome annotation databases
EnsemblPlantsi | AT2G33800.1; AT2G33800.1; AT2G33800 |
GeneIDi | 817947 |
Gramenei | AT2G33800.1; AT2G33800.1; AT2G33800 |
KEGGi | ath:AT2G33800 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U78721 Genomic DNA Translation: AAC69132.1 CP002685 Genomic DNA Translation: AEC08888.1 AY093289 mRNA Translation: AAM13288.1 AY054523 mRNA Translation: AAK96714.1 AY087734 mRNA Translation: AAM65271.1 |
PIRi | G84749 |
RefSeqi | NP_180936.1, NM_128939.4 |
3D structure databases
SMRi | P93014 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 3294, 4 interactors |
IntActi | P93014, 1 interactor |
STRINGi | 3702.AT2G33800.1 |
PTM databases
MetOSitei | P93014 |
2D gel databases
World-2DPAGEi | 0003:P93014 |
Proteomic databases
PaxDbi | P93014 |
PRIDEi | P93014 |
ProteomicsDBi | 228197 |
Genome annotation databases
EnsemblPlantsi | AT2G33800.1; AT2G33800.1; AT2G33800 |
GeneIDi | 817947 |
Gramenei | AT2G33800.1; AT2G33800.1; AT2G33800 |
KEGGi | ath:AT2G33800 |
Organism-specific databases
Araporti | AT2G33800 |
TAIRi | locus:2057645, AT2G33800 |
Phylogenomic databases
eggNOGi | KOG0877, Eukaryota |
HOGENOMi | CLU_075168_1_0_1 |
InParanoidi | P93014 |
OMAi | MRQFREV |
OrthoDBi | 1504411at2759 |
PhylomeDBi | P93014 |
Miscellaneous databases
PROi | PR:P93014 |
Gene expression databases
ExpressionAtlasi | P93014, baseline and differential |
Genevisiblei | P93014, AT |
Family and domain databases
Gene3Di | 3.30.230.10, 1 hit |
HAMAPi | MF_01307_B, Ribosomal_S5_B, 1 hit |
InterProi | View protein in InterPro IPR000851, Ribosomal_S5 IPR005712, Ribosomal_S5_bac-type IPR005324, Ribosomal_S5_C IPR020568, Ribosomal_S5_D2-typ_fold IPR014721, Ribosomal_S5_D2-typ_fold_subgr IPR013810, Ribosomal_S5_N IPR018192, Ribosomal_S5_N_CS |
PANTHERi | PTHR13718, PTHR13718, 1 hit |
Pfami | View protein in Pfam PF00333, Ribosomal_S5, 1 hit PF03719, Ribosomal_S5_C, 1 hit |
SUPFAMi | SSF54211, SSF54211, 1 hit |
TIGRFAMsi | TIGR01021, rpsE_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00585, RIBOSOMAL_S5, 1 hit PS50881, S5_DSRBD, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RR5_ARATH | |
Accessioni | P93014Primary (citable) accession number: P93014 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | September 5, 2006 |
Last sequence update: | May 1, 1997 | |
Last modified: | December 2, 2020 | |
This is version 134 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - SIMILARITY comments
Index of protein domains and families