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Protein
Submitted name:

COLlagen

Gene

col-73

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
COLlagenImported
Gene namesi
Name:col-73Imported
ORF Names:CELE_F11G11.12Imported, F11G11.12Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiF11G11.12 ; CE09354 ; WBGene00000649 ; col-73

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 43HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

EPDiP91250
PaxDbiP91250
PeptideAtlasiP91250

Expressioni

Gene expression databases

BgeeiWBGene00000649 Expressed in 4 organ(s), highest expression level in material anatomical entity

Interactioni

Protein-protein interaction databases

DIPiDIP-24274N
IntActiP91250, 1 interactor
STRINGi6239.F11G11.12

Structurei

3D structure databases

ProteinModelPortaliP91250
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 69Col_cuticle_NInterPro annotationAdd BLAST53

Keywords - Domaini

CollagenImported, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00610000086159
HOGENOMiHOG000085656
InParanoidiP91250
OMAiQDEISFC
OrthoDBiEOG091G0UFQ
PhylomeDBiP91250

Family and domain databases

InterProiView protein in InterPro
IPR002486 Col_cuticle_N
IPR008160 Collagen
PfamiView protein in Pfam
PF01484 Col_cuticle_N, 1 hit
PF01391 Collagen, 2 hits
SMARTiView protein in SMART
SM01088 Col_cuticle_N, 1 hit

Sequencei

Sequence statusi: Complete.

P91250-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSQDDKQKLV EVETVKKFAF FGIAVSTVAT LTAIVAVPML CMYMQNVQSG
60 70 80 90 100
LQDEINFCRT RSDSLRGEYT KLDQFRKAES REKRQTYQCC SCGIGPAGSV
110 120 130 140 150
GNPGQDGAPG NDGRPGAPGA PGPDAPNEHV QPTPADFCFE CPPGPAGNAG
160 170 180 190 200
NPGPKGPPGQ PGAPGEQGPN GRPGAPGAPG PQGPPGTAGN DGTPGQPGAP
210 220 230 240 250
GQVRTVPAPP GNPGQPGEPG AQGPPGEDGR PGNSGPQGPP GPQGEPGQDG
260 270 280
APGNPGAPGE AGEPGKDGAK GGCDHCPIPR TAPGY
Length:285
Mass (Da):28,263
Last modified:May 1, 1997 - v1
Checksum:iFB48BC3F1D4EA866
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA Translation: CCD69263.1
PIRiT29982
RefSeqiNP_494880.1, NM_062479.5
UniGeneiCel.15450

Genome annotation databases

EnsemblMetazoaiF11G11.12; F11G11.12; WBGene00000649
GeneIDi184366
KEGGicel:CELE_F11G11.12
UCSCiF11G11.12 c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA Translation: CCD69263.1
PIRiT29982
RefSeqiNP_494880.1, NM_062479.5
UniGeneiCel.15450

3D structure databases

ProteinModelPortaliP91250
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-24274N
IntActiP91250, 1 interactor
STRINGi6239.F11G11.12

Proteomic databases

EPDiP91250
PaxDbiP91250
PeptideAtlasiP91250

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF11G11.12; F11G11.12; WBGene00000649
GeneIDi184366
KEGGicel:CELE_F11G11.12
UCSCiF11G11.12 c. elegans

Organism-specific databases

CTDi184366
WormBaseiF11G11.12 ; CE09354 ; WBGene00000649 ; col-73

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00610000086159
HOGENOMiHOG000085656
InParanoidiP91250
OMAiQDEISFC
OrthoDBiEOG091G0UFQ
PhylomeDBiP91250

Gene expression databases

BgeeiWBGene00000649 Expressed in 4 organ(s), highest expression level in material anatomical entity

Family and domain databases

InterProiView protein in InterPro
IPR002486 Col_cuticle_N
IPR008160 Collagen
PfamiView protein in Pfam
PF01484 Col_cuticle_N, 1 hit
PF01391 Collagen, 2 hits
SMARTiView protein in SMART
SM01088 Col_cuticle_N, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiP91250_CAEEL
AccessioniPrimary (citable) accession number: P91250
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: September 12, 2018
This is version 126 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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