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UniProtKB - P90245 (POL1_BAMMN)

Entry version 119 (23 Feb 2022)
Sequence version 1 (01 May 1997)
Previous versions | rss
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Protein

Genome polyprotein 1

Gene
N/A
Organism
Barley mild mosaic virus (strain Na1) (BaMMV)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Has helicase activity. It may be involved in replication (By similarity).

By similarity

Both 6K peptides are indispensable for virus replication.

By similarity

Has proteolytic activity.

By similarity

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

  • Hydrolyzes glutaminyl bonds, and activity is further restricted by preferences for the amino acids in P6 - P1' that vary with the species of potyvirus, e.g. Glu-Xaa-Xaa-Tyr-Xaa-Gln-|-(Ser or Gly) for the enzyme from tobacco etch virus. The natural substrate is the viral polyprotein, but other proteins and oligopeptides containing the appropriate consensus sequence are also cleaved. EC:3.4.22.44

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei1302For nuclear inclusion protein A activityPROSITE-ProRule annotation1
Active sitei1338For nuclear inclusion protein A activityPROSITE-ProRule annotation1
Active sitei1405For nuclear inclusion protein A activityPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi487 – 494ATPPROSITE-ProRule annotation8

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHelicase, Hydrolase, Nucleotidyltransferase, RNA-directed RNA polymerase, Transferase
Biological processViral RNA replication
LigandATP-binding, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Genome polyprotein 1
Cleaved into the following 8 chains:
Protein P3
6 kDa protein 1
Short name:
6K1
Cytoplasmic inclusion protein (EC:3.6.4.-)
Short name:
CI
6 kDa protein 2
Short name:
6K2
Viral genome-linked protein
Alternative name(s):
VPg
Nuclear inclusion protein A (EC:3.4.22.44)
Short name:
NI-a
Short name:
NIa
Alternative name(s):
NIa-pro
Nuclear inclusion protein B (EC:2.7.7.48)
Short name:
NI-b
Short name:
NIb
Alternative name(s):
RNA-directed RNA polymerase
Coat protein
Short name:
CP
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBarley mild mosaic virus (strain Na1) (BaMMV)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri103900 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiViruses › Riboviria › Orthornavirae › Pisuviricota › Stelpaviricetes › Patatavirales › Potyviridae › Bymovirus ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section only exists in viral entries and indicates the host(s) either as a specific organism or taxonomic group of organisms that are susceptible to be infected by a virus.<p><a href='/help/virus_host' target='_top'>More...</a></p>Virus hostiHordeum vulgare (Barley) [TaxID: 4513]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000007444 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000405301 – 292Protein P3Sequence analysisAdd BLAST292
ChainiPRO_0000040531293 – 3596 kDa protein 1Sequence analysisAdd BLAST67
ChainiPRO_0000040532360 – 1017Cytoplasmic inclusion proteinSequence analysisAdd BLAST658
ChainiPRO_00000405331018 – 10816 kDa protein 2Sequence analysisAdd BLAST64
ChainiPRO_00000405341082 – 1256Viral genome-linked proteinSequence analysisAdd BLAST175
ChainiPRO_00000405351257 – 1496Nuclear inclusion protein ASequence analysisAdd BLAST240
ChainiPRO_00000405361497 – 2007Nuclear inclusion protein BSequence analysisAdd BLAST511
ChainiPRO_00000405372008 – 2258Coat proteinSequence analysisAdd BLAST251

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1141O-(5'-phospho-RNA)-tyrosineBy similarity1

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

VPg is uridylylated by the polymerase and is covalently attached to the 5'-end of the genomic RNA. This uridylylated form acts as a nucleotide-peptide primer for the polymerase (By similarity).By similarity
The viral RNA1 of bymoviruses is expressed as a single polyprotein which undergoes post-translational proteolytic processing by the main proteinase NIa-pro resulting in the production of at least eight individual proteins.Curated

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection describes interesting single amino acid sites on the sequence that are not defined in any other subsection. This subsection can be displayed in different sections ('Function', 'PTM / Processing', 'Pathology and Biotech') according to its content.<p><a href='/help/site' target='_top'>More...</a></p>Sitei292 – 293CleavageSequence analysis2
Sitei359 – 360CleavageSequence analysis2
Sitei1017 – 1018CleavageSequence analysis2
Sitei1081 – 1082CleavageSequence analysis2
Sitei1256 – 1257CleavageSequence analysis2
Sitei1496 – 1497CleavageSequence analysis2
Sitei2007 – 2008CleavageSequence analysis2

Keywords - PTMi

Covalent protein-RNA linkage, Phosphoprotein

Proteomic databases

PRoteomics IDEntifications database

More...PRIDEi		P90245

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini439 – 597Helicase ATP-bindingPROSITE-ProRule annotationAdd BLAST159
Domaini612 – 778Helicase C-terminalPROSITE-ProRule annotationAdd BLAST167
Domaini1257 – 1476Peptidase C4PROSITE-ProRule annotationAdd BLAST220
Domaini1745 – 1869RdRp catalyticPROSITE-ProRule annotationAdd BLAST125

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni2027 – 2047DisorderedSequence analysisAdd BLAST21
Regioni2233 – 2258DisorderedSequence analysisAdd BLAST26

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi2240 – 2258Basic and acidic residuesSequence analysisAdd BLAST19

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the bymoviruses polyprotein 1 family.Curated

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.40.10.10, 1 hit
3.30.70.270, 1 hit
3.40.50.300, 2 hits

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR043502, DNA/RNA_pol_sf
IPR014001, Helicase_ATP-bd
IPR001650, Helicase_C
IPR027417, P-loop_NTPase
IPR009003, Peptidase_S1_PA
IPR043504, Peptidase_S1_PA_chymotrypsin
IPR001592, Poty_coat
IPR001730, Potyv_NIa-pro_dom
IPR013648, PP_Potyviridae
IPR043128, Rev_trsase/Diguanyl_cyclase
IPR001205, RNA-dir_pol_C
IPR007094, RNA-dir_pol_PSvirus

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00271, Helicase_C, 1 hit
PF00863, Peptidase_C4, 1 hit
PF00767, Poty_coat, 1 hit
PF08440, Poty_PP, 1 hit
PF00680, RdRP_1, 1 hit

Protein Motif fingerprint database; a protein domain database

More...PRINTSi		PR00966, NIAPOTYPTASE

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00487, DEXDc, 1 hit
SM00490, HELICc, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF50494, SSF50494, 1 hit
SSF52540, SSF52540, 1 hit
SSF56672, SSF56672, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS51192, HELICASE_ATP_BIND_1, 1 hit
PS51194, HELICASE_CTER, 1 hit
PS51436, POTYVIRUS_NIA_PRO, 1 hit
PS50507, RDRP_SSRNA_POS, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

P90245-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEEFIPEVFY QNQVQSLKKI LKSWKRDTSI YAYLAREQEV LAFLVLSPAH 
        60         70         80         90        100
IAKLNKLLTE ESARCALLAQ NCETIEALAV VRQALQGVTL HFGDNGMEKG 
       110        120        130        140        150
WLHMMKALDA CLDESFSENA AALKKSIQAV GHKLIAAKNR IESCERSVNH 
       160        170        180        190        200
LTTFQFAREY GLSTTYFEKL SNFGGHIRSF VWSSDSGEIF PKPKRSSRTK 
       210        220        230        240        250
RISTFTSYYW GEFWCNCIWL LCSLWSPARW CFNSVVFIWS LCGVLNLSMV 
       260        270        280        290        300
VLQFTLKRHF GRYYFRYVMS GVLAICAVCC VHLKNRKGPI LQASQKDKRF 
       310        320        330        340        350
IGILAFCITV IYMFDVDLAD SLSNNLHKIS RLVNLFLDDN RGFATPALDN 
       360        370        380        390        400
LTDFTTILQS GTSSDDLKIV QDTLAVVLQV DDEDATQDDA IYDSDGLQTF 
       410        420        430        440        450
KQWVSHNQLA GMQLARPLQY PCSTTYGLTA DNVAELATSM AQEAKQWSQV 
       460        470        480        490        500
VGHTGSGKST RLPTAYANCL KGLAGRKKNV LVCEPTRAAT VNVTSGISQN 
       510        520        530        540        550
FGRLVYGRHE GWSNLGDKTI QVMTYGSALA AWKVDNKFLS QFDAVFLDES 
       560        570        580        590        600
HLITTHALVF ESICQEVTNV RKFYVSATPR DGKKCPEAVR RYEIKTVKSE 
       610        620        630        640        650
CSSVDTFVRS QDKENSLYVL QHETVLVFLA GKAECDRAAS NWNKLYSTNM 
       660        670        680        690        700
YAYSLTGDNF TVAYENIVTR MLTDRIIVFC TNILETGVTL NVDCVVDFGF 
       710        720        730        740        750
TMRPELDLVD KSLTLMRRRV TENERAQRIG RAGRLRTGHA ICIGNPETRH 
       760        770        780        790        800
DLVPPETLYE AALLSFVHGV QFYINEHFEN AWIEGVTKSQ ASVMTQFKLS 
       810        820        830        840        850
PFLMRDIVRD DGAIPLSLHK ILKNYTHRNT DLIGTKLSVM SHVYNSWPLY 
       860        870        880        890        900
RTVHQSIFRG DSNVPQALKH ARVPFNVSTA HDFPWENFAQ ACLEFQPRVL 
       910        920        930        940        950
QVFSDSSSTS RIINLQIGKM HIVNSMEEVK ININSYQRSA ENLRSVKDSF 
       960        970        980        990       1000
ESSIFRTKLL RGNPTGKITK RIETLLDNVR VLQQVHAKLE IIAYSGGEKL 
      1010       1020       1030       1040       1050
NMDKKSVDEL NEIVELQSKN SLTAEELARI LHLTKPTSTF FNLFAERGRQ 
      1060       1070       1080       1090       1100
MLVTLLVMVA ASLMYLVFWV SPRKQDDITI EGKGRAYNRD KRMGYDSYEE 
      1110       1120       1130       1140       1150
DEVRHKINKK FKERSTRFSN DSKPETSSKY RNLKQEFVNF YDLKTDANVL 
      1160       1170       1180       1190       1200
QAVFTAMDGA VLLQTEAPMA DIDRVNRLLN DHFEDSESQA AHEGLNTMVK 
      1210       1220       1230       1240       1250
CHLTMKDGRQ FELDMEQHDP ETIAKLGGEV GFRMNRYDLR QVGATRYINP 
      1260       1270       1280       1290       1300
KAQTSAATLE GMTMKPMSAF TIDSAKMVGF IKTAKDTLNC ILYGDWIIAP 
      1310       1320       1330       1340       1350
AHIQQGEGDI TFIFQHTQFT TTTERLASYG IRQFKGLDLV VIRRPQQIRA 
      1360       1370       1380       1390       1400
VKKDMRASIL DTPTEVQMLY LSTKGGKYQV STSAVCFPHY NNRWGHVIST 
      1410       1420       1430       1440       1450
AEGMCGCIVF NPTTNHIVGI HVSYNDTRRR NEFQAFTSDV LTTINAPGHE 
      1460       1470       1480       1490       1500
IPFSPWVFDW KFCGYTTKPR NMQSAPSTLE RLNINATGFG FKLNAQGIKP 
      1510       1520       1530       1540       1550
AMLRSTETFS REFPNTQFKL IGEVKKGLID KHTITGENPY FLEFLNTFKP 
      1560       1570       1580       1590       1600
YQWVQAFMDE YAPSILAYDA YFKDLKKYDR PPHASVFCED TLTKAKHKMI 
      1610       1620       1630       1640       1650
KILEEAGMGR TLVRTTEQVL LDMAWTTSGG PLYHGKKIDI VQHLSDDELV 
      1660       1670       1680       1690       1700
QFSEACQQAL ITGTLDGVWN GSLKAELRSS QKILERKTRV FTAAPITSLI 
      1710       1720       1730       1740       1750
AMKYYVDDFN KQFYKTHLKA PHTVGINKFN RGWQNLYEKL NKPGWTHGSG 
      1760       1770       1780       1790       1800
DGSRFDSSID GFLFDVIKDI RKHFMDAEHH KQLDTIYEEI VNTKICLANG 
      1810       1820       1830       1840       1850
LVIQKNCGNN SGQPSTVVDN TLALMTSFLY AYARLTGDDT FELMDENFVF 
      1860       1870       1880       1890       1900
VCNGDDNKFA MSPSFMVKFG CDFSPFLSEL GLTYEFDEAT EDICENPYMS 
      1910       1920       1930       1940       1950
LTMVRTSFGI GFSLSIERIV AILQWSRAGG VLHAYLSGIA ALFESFNTPK 
      1960       1970       1980       1990       2000
LFNLVHTYLL WLVTEHEEEL FSMMELKDMF MPLPTKEQIA LLHYVGTEPI 
      2010       2020       2030       2040       2050
MEETYLQSGK DDPDPIVPPV SDTDLTNMAA APPDNRRSRA VVPRGTSDWN 
      2060       2070       2080       2090       2100
LPEPKMRMLG FKSKINIETL ADVPEGYMNT FASVATETQR RKWEEATRGD 
      2110       2120       2130       2140       2150
FGITDNEKWE KLLIAACIYF ADNGTSPNFD EELTMEVNGG LNSIKEYPVR 
      2160       2170       2180       2190       2200
PFVVRAKKIS TLRRIFRCYS IETKLMFVKL RRVPQWAIKH GCLDEIVFDF 
      2210       2220       2230       2240       2250
MIPDQFTSRT ALETLKQTKL AAIGVGTSNS LLTSEQTNMR TTETRRRNDY 

DGHEALLR
Length:2,258
Mass (Da):256,357
Last modified:May 1, 1997 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i38A06A36F19D4D4A
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
D83408 Genomic RNA Translation: BAA18953.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D83408 Genomic RNA Translation: BAA18953.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Proteomic databases

PRIDEiP90245

Family and domain databases

Gene3Di2.40.10.10, 1 hit
3.30.70.270, 1 hit
3.40.50.300, 2 hits
InterProiView protein in InterPro
IPR043502, DNA/RNA_pol_sf
IPR014001, Helicase_ATP-bd
IPR001650, Helicase_C
IPR027417, P-loop_NTPase
IPR009003, Peptidase_S1_PA
IPR043504, Peptidase_S1_PA_chymotrypsin
IPR001592, Poty_coat
IPR001730, Potyv_NIa-pro_dom
IPR013648, PP_Potyviridae
IPR043128, Rev_trsase/Diguanyl_cyclase
IPR001205, RNA-dir_pol_C
IPR007094, RNA-dir_pol_PSvirus
PfamiView protein in Pfam
PF00271, Helicase_C, 1 hit
PF00863, Peptidase_C4, 1 hit
PF00767, Poty_coat, 1 hit
PF08440, Poty_PP, 1 hit
PF00680, RdRP_1, 1 hit
PRINTSiPR00966, NIAPOTYPTASE
SMARTiView protein in SMART
SM00487, DEXDc, 1 hit
SM00490, HELICc, 1 hit
SUPFAMiSSF50494, SSF50494, 1 hit
SSF52540, SSF52540, 1 hit
SSF56672, SSF56672, 1 hit
PROSITEiView protein in PROSITE
PS51192, HELICASE_ATP_BIND_1, 1 hit
PS51194, HELICASE_CTER, 1 hit
PS51436, POTYVIRUS_NIA_PRO, 1 hit
PS50507, RDRP_SSRNA_POS, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPOL1_BAMMN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P90245
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: May 1, 1997
Last modified: February 23, 2022
This is version 119 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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