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Protein

Glycine, alanine and asparagine-rich protein

Gene
N/A
Organism
Haliotis asinina (Donkey's ear abalone) (Ass's ear abalone)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Glycine, alanine and asparagine-rich protein
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHaliotis asinina (Donkey's ear abalone) (Ass's ear abalone)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri109174 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaLophotrochozoaMolluscaGastropodaVetigastropodaLepetellidaHaliotoideaHaliotidaeHaliotis

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Secreted

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 17Sequence analysisAdd BLAST17
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000039944318 – 507Glycine, alanine and asparagine-rich proteinSequence analysisAdd BLAST490

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Component of the acid-soluble and acid-insoluble organic matrix of calcified shell layers (at protein level).1 Publication

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili158 – 185Sequence analysisAdd BLAST28

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi18 – 501Gly-richSequence analysisAdd BLAST484
Compositional biasi153 – 369Ala-richSequence analysisAdd BLAST217
Compositional biasi411 – 492Asn-richSequence analysisAdd BLAST82

Keywords - Domaini

Coiled coil, Signal

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

P86732-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLRVPLLVLC LALSVGADYY GYGWGRNGGG GGSGGGSGSS RASASASASA
60 70 80 90 100
RANSIGNLVG RLTSLVDASA SARASASANA GGFGGSGAGG SGGNGFGGGS
110 120 130 140 150
GGSGFGGGSG GSGFGGGSGG SGFGGGSGGS GFGGGSGGSG FGGGSGGSGF
160 170 180 190 200
GGASASASAQ ALASATAELQ AAQDAYDQAS AYAEATARAA ANGGSLDSSA
210 220 230 240 250
LASAIASAEA SVSARGASII ARARARAEAT VRAARRSFAS AQASAEASVS
260 270 280 290 300
AVRSAEGRAR SFARAVARAR ASARAAIAGV RSSGRAFASA TARARASVSA
310 320 330 340 350
AARAVARARA QAVARARASI RASASASARA SASAAAEARA AAYARVQVAA
360 370 380 390 400
AAAARAAASA ASASASASAS GSSFGSGGSG GSGNGGFGSF GASANAVANA
410 420 430 440 450
FAQAFGGGLG NGGNGGNGNG GNGGNGGNGN GGNGGNGNGG NGGNGNGGNG
460 470 480 490 500
GNGGNGNGGN GGNGNGGNGR NGNGGNGRNG NGGNGGNGNG RNGRGGRYYY

GSSDYYY
Length:507
Mass (Da):45,640
Last modified:October 5, 2010 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iBD32956EE76DF96C
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti26 – 27RN → LY in GT275005 (PubMed:19915030).Curated2
Sequence conflicti100 – 105SGGSGF → NGNGGN in GT275313 (PubMed:19915030).Curated6
Sequence conflicti102 – 106GSGFG → SPGN in GT274653 (PubMed:19915030).Curated5
Sequence conflicti139S → I in GT275007 (PubMed:19915030).Curated1
Sequence conflicti165A → S in GT274653 (PubMed:19915030).Curated1
Sequence conflicti178Q → H in GT274653 (PubMed:19915030).Curated1
Sequence conflicti209 – 210EA → KP in GT271728 (PubMed:19915030).Curated2
Sequence conflicti300A → S in GT276380 (PubMed:19915030).Curated1
Sequence conflicti325 – 326SA → FC in GT276151 (PubMed:19915030).Curated2
Sequence conflicti332A → T in GT276151 (PubMed:19915030).Curated1
Sequence conflicti432G → R in GT272926 (PubMed:19915030).Curated1
Sequence conflicti462G → R in GT277720 (PubMed:19915030).Curated1
Sequence conflicti496G → R in GT277518 (PubMed:19915030).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
GT271728 mRNA No translation available.
GT272311 mRNA No translation available.
GT272436 mRNA No translation available.
GT272926 mRNA No translation available.
GT273587 mRNA No translation available.
GT274163 mRNA No translation available.
GT274619 mRNA No translation available.
GT274653 mRNA No translation available.
GT274865 mRNA No translation available.
GT275005 mRNA No translation available.
GT275007 mRNA No translation available.
GT275313 mRNA No translation available.
GT276380 mRNA No translation available.
GT276151 mRNA No translation available.
GT277518 mRNA No translation available.
GT277720 mRNA No translation available.
EZ420619 mRNA No translation available.

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GT271728 mRNA No translation available.
GT272311 mRNA No translation available.
GT272436 mRNA No translation available.
GT272926 mRNA No translation available.
GT273587 mRNA No translation available.
GT274163 mRNA No translation available.
GT274619 mRNA No translation available.
GT274653 mRNA No translation available.
GT274865 mRNA No translation available.
GT275005 mRNA No translation available.
GT275007 mRNA No translation available.
GT275313 mRNA No translation available.
GT276380 mRNA No translation available.
GT276151 mRNA No translation available.
GT277518 mRNA No translation available.
GT277720 mRNA No translation available.
EZ420619 mRNA No translation available.

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiGAAP_HALAI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P86732
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 7, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Direct protein sequencing
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