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Protein

60S ribosomal protein L36a

Gene

Rpl36a

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L36a
Alternative name(s):
60S ribosomal protein L44
Gene namesi
Name:Rpl36a
Synonyms:Rpl44
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componentsi: Chromosome 12, Chromosome X

Organism-specific databases

MGIiMGI:1201789 Rpl36a

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001491201 – 10660S ribosomal protein L36aAdd BLAST106

Proteomic databases

EPDiP83882
PaxDbiP83882
PeptideAtlasiP83882
PRIDEiP83882
TopDownProteomicsiP83882

PTM databases

iPTMnetiP83882
PhosphoSitePlusiP83882
SwissPalmiP83882

Expressioni

Gene expression databases

BgeeiENSMUSG00000049751 Expressed in 32 organ(s), highest expression level in female gonad
ExpressionAtlasiP83882 baseline and differential
GenevisibleiP83882 MM

Interactioni

Protein-protein interaction databases

IntActiP83882, 1 interactor
MINTiP83882
STRINGi10090.ENSMUSP00000108837

Structurei

3D structure databases

ProteinModelPortaliP83882
SMRiP83882
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3464 Eukaryota
COG1631 LUCA
GeneTreeiENSGT00390000018085
HOGENOMiHOG000224989
HOVERGENiHBG056127
InParanoidiP83882
KOiK02929
OMAiYGGFPRP
OrthoDBiEOG091G12JU
PhylomeDBiP83882
TreeFamiTF300213

Family and domain databases

InterProiView protein in InterPro
IPR000552 Ribosomal_L44e
IPR011332 Ribosomal_zn-bd
PANTHERiPTHR10369 PTHR10369, 1 hit
PfamiView protein in Pfam
PF00935 Ribosomal_L44, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002841 Ribosomal_L44e, 1 hit
SUPFAMiSSF57829 SSF57829, 1 hit
PROSITEiView protein in PROSITE
PS01172 RIBOSOMAL_L44E, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.iShow all

P83882-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVNVPKTRRT FCKKCGKHQP HKVTQYKKGK DSLYAQGKRR YDRKQSGYGG
60 70 80 90 100
QTKPIFRKKA KTTKKIVLRL ECVEPNCRSK RMLAIKRCKH FELGGDKKRK

GQVIQF
Length:106
Mass (Da):12,441
Last modified:January 23, 2007 - v2
Checksum:iAE3308265D70BD26
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
E9Q131E9Q131_MOUSE
60S ribosomal protein L36a
Rpl36a
67Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U58105 Genomic DNA Translation: AAB47245.1
AK002540 mRNA Translation: BAB22175.1
AK003166 mRNA Translation: BAB22616.1
AK010629 mRNA Translation: BAB27075.1
AK012502 mRNA Translation: BAB28285.1
BC019810 mRNA Translation: AAH19810.1
BC027515 mRNA Translation: AAH27515.1
BC081439 mRNA Translation: AAH81439.1
BC081440 mRNA Translation: AAH81440.1
CCDSiCCDS41123.1
RefSeqiNP_063918.1, NM_019865.5
NP_079865.1, NM_025589.4
UniGeneiMm.286408
Mm.379115
Mm.491116

Genome annotation databases

EnsembliENSMUST00000054544; ENSMUSP00000059766; ENSMUSG00000049751
ENSMUST00000110619; ENSMUSP00000106249; ENSMUSG00000049751
ENSMUST00000110620; ENSMUSP00000106250; ENSMUSG00000049751
ENSMUST00000113211; ENSMUSP00000108837; ENSMUSG00000079435
GeneIDi19982
66483
KEGGimmu:19982
mmu:66483
UCSCiuc007nrs.2 mouse

Similar proteinsi

Entry informationi

Entry nameiRL36A_MOUSE
AccessioniPrimary (citable) accession number: P83882
Secondary accession number(s): P09896, P10661
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: January 23, 2007
Last modified: September 12, 2018
This is version 126 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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