Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Giant hemoglobins B chain

Gene
N/A
Organism
Riftia pachyptila (Vent tube worm)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi96Iron (heme proximal ligand)1

GO - Molecular functioni

Keywordsi

Biological processOxygen transport, Transport
LigandHeme, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Giant hemoglobins B chain
OrganismiRiftia pachyptila (Vent tube worm)
Taxonomic identifieri6426 [NCBI]
Taxonomic lineageiEukaryotaMetazoaLophotrochozoaAnnelidaPolychaetaPalpataCanalipalpataSabellidaSiboglinidaeRiftia

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000525091 – 144Giant hemoglobins B chainAdd BLAST144

Interactioni

Subunit structurei

Part of giant hemoglobin C1, V1 and V2. This worm has three different extracellular Hbs: two dissolved in the vascular blood, V1 (CA. 3,500 kDa) and V2 (CA. 400 kDa), and one in the coelomic fluid, C1 (CA. 400 kDa). V1 consists of four heme-containing, globin chains (B-E) and four linker chains (L1-L4). V2 consists of six globin chains (A-F) and C1 consists of five globin chains (A-E).1 Publication

Structurei

Secondary structure

1144
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP80592
SMRiP80592
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP80592

Family & Domainsi

Sequence similaritiesi

Belongs to the globin family.PROSITE-ProRule annotation

Family and domain databases

Gene3Di1.10.490.10, 1 hit
InterProiView protein in InterPro
IPR000971 Globin
IPR009050 Globin-like_sf
IPR012292 Globin/Proto
IPR014610 Haemoglobin_extracell
PfamiView protein in Pfam
PF00042 Globin, 1 hit
PIRSFiPIRSF036517 Ext_hemo, 1 hit
SUPFAMiSSF46458 SSF46458, 1 hit
PROSITEiView protein in PROSITE
PS01033 GLOBIN, 1 hit

Sequencei

Sequence statusi: Complete.

P80592-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
DYVCGPLQRL KVKRQWAEAY GSGNSREEFG HFIWSHVFQH SPAARDMFKR
60 70 80 90 100
VRGDNIHTPA FRAHATRVLG GLDMCIALLD DEPVLNTQLA HLAKQHETRG
110 120 130 140
VEAAHYDTVN HAVMMGVENV IGSEVFDQDA WKPCLNVITN GIQG
Length:144
Mass (Da):16,135
Last modified:July 15, 1998 - v1
Checksum:i9A094A9E8E981568
GO

Similar proteinsi

Cross-referencesi

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1YHUX-ray3.15B/F/J/N/R/V1-144[»]
ProteinModelPortaliP80592
SMRiP80592
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiP80592

Family and domain databases

Gene3Di1.10.490.10, 1 hit
InterProiView protein in InterPro
IPR000971 Globin
IPR009050 Globin-like_sf
IPR012292 Globin/Proto
IPR014610 Haemoglobin_extracell
PfamiView protein in Pfam
PF00042 Globin, 1 hit
PIRSFiPIRSF036517 Ext_hemo, 1 hit
SUPFAMiSSF46458 SSF46458, 1 hit
PROSITEiView protein in PROSITE
PS01033 GLOBIN, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiGLBB_RIFPA
AccessioniPrimary (citable) accession number: P80592
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: July 15, 1998
Last modified: April 25, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again