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Protein

30S ribosomal protein S3

Gene

rpsC

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
TTHE300852:G1GKC-1692-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
30S ribosomal protein S3
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:rpsC
Synonyms:rps3
Ordered Locus Names:TTHA1686
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri300852 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000532 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

GO - Cellular componenti

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Chemistry databases

Drug and drug target database

More...
DrugBanki
DB08185 2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section indicates that the initiator methionine is cleaved from the mature protein.<p><a href='/help/init_met' target='_top'>More...</a></p>Initiator methionineiRemoved1 Publication
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001302232 – 23930S ribosomal protein S3Add BLAST238

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
300852.TTHA1686

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1239
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

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RCSB PDBi

Protein Data Bank Japan

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PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00C1-239[»]
1HNWX-ray3.40C1-239[»]
1HNXX-ray3.40C1-239[»]
1HNZX-ray3.30C1-239[»]
1HR0X-ray3.20C1-239[»]
1I94X-ray3.20C2-239[»]
1I95X-ray4.50C2-239[»]
1I96X-ray4.20C2-239[»]
1I97X-ray4.50C2-239[»]
1IBKX-ray3.31C1-239[»]
1IBLX-ray3.11C1-239[»]
1IBMX-ray3.31C1-239[»]
1J5EX-ray3.05C1-239[»]
1L1Umodel-C1-207[»]
1ML5electron microscopy14.00F1-239[»]
1N32X-ray3.00C1-239[»]
1N33X-ray3.35C1-239[»]
1N34X-ray3.80C1-239[»]
1N36X-ray3.65C1-239[»]
1VVJX-ray3.44QC/XC1-239[»]
1VY4X-ray2.60AC/CC1-239[»]
1VY5X-ray2.55AC/CC1-239[»]
1VY6X-ray2.90AC/CC1-239[»]
1VY7X-ray2.80AC/CC1-239[»]
1XMOX-ray3.25C1-239[»]
1XMQX-ray3.00C1-239[»]
1XNQX-ray3.05C1-239[»]
1XNRX-ray3.10C1-239[»]
2E5LX-ray3.30C2-239[»]
2F4VX-ray3.80C1-239[»]
2HHHX-ray3.35C1-239[»]
2UU9X-ray3.10C2-239[»]
2UUAX-ray2.90C2-239[»]
2UUBX-ray2.80C2-239[»]
2UUCX-ray3.10C2-239[»]
2UXBX-ray3.10C2-239[»]
2UXCX-ray2.90C2-239[»]
2UXDX-ray3.20C2-239[»]
2VQEX-ray2.50C1-239[»]
2VQFX-ray2.90C1-239[»]
2ZM6X-ray3.30C2-239[»]
3OTOX-ray3.69C1-239[»]
3T1HX-ray3.11C1-239[»]
3T1YX-ray2.80C1-239[»]
4AQYX-ray3.50C1-239[»]
4B3MX-ray2.90C1-239[»]
4B3RX-ray3.00C1-239[»]
4B3SX-ray3.15C1-239[»]
4B3TX-ray3.00C1-239[»]
4DR1X-ray3.60C1-239[»]
4DR2X-ray3.25C1-239[»]
4DR3X-ray3.35C1-239[»]
4DR4X-ray3.97C1-239[»]
4DR5X-ray3.45C1-239[»]
4DR6X-ray3.30C1-239[»]
4DR7X-ray3.75C1-239[»]
4DUYX-ray3.39C1-239[»]
4DUZX-ray3.65C1-239[»]
4DV0X-ray3.85C1-239[»]
4DV1X-ray3.85C1-239[»]
4DV2X-ray3.65C1-239[»]
4DV3X-ray3.55C1-239[»]
4DV4X-ray3.65C1-239[»]
4DV5X-ray3.68C1-239[»]
4DV6X-ray3.30C1-239[»]
4DV7X-ray3.29C1-239[»]
4GKJX-ray3.30C2-207[»]
4GKKX-ray3.20C2-207[»]
4JI0X-ray3.49C1-239[»]
4JI1X-ray3.14C1-239[»]
4JI2X-ray3.64C1-239[»]
4JI3X-ray3.35C1-239[»]
4JI4X-ray3.69C1-239[»]
4JI5X-ray3.85C1-239[»]
4JI6X-ray3.55C1-239[»]
4JI7X-ray3.50C1-239[»]
4JI8X-ray3.74C1-239[»]
4JV5X-ray3.16C2-207[»]
4JYAX-ray3.10C2-207[»]
4K0KX-ray3.40C2-208[»]
4KHPX-ray3.10C2-207[»]
4L47X-ray3.22QC/XC1-239[»]
4L71X-ray3.90QC/XC1-239[»]
4LELX-ray3.90QC/XC1-239[»]
4LF4X-ray3.34C1-239[»]
4LF5X-ray3.75C1-239[»]
4LF6X-ray3.31C1-239[»]
4LF7X-ray3.15C1-239[»]
4LF8X-ray3.15C1-239[»]
4LF9X-ray3.28C1-239[»]
4LFAX-ray3.65C1-239[»]
4LFBX-ray3.01C1-239[»]
4LFCX-ray3.60C1-239[»]
4LFZX-ray3.92QC/XC1-239[»]
4LNTX-ray2.94QC/XC1-239[»]
4LSKX-ray3.48QC/XC1-239[»]
4LT8X-ray3.14QC/XC1-239[»]
4NXMX-ray3.65C1-239[»]
4NXNX-ray3.54C1-239[»]
4OX9X-ray3.80C1-239[»]
4P6FX-ray3.60QC/XC1-239[»]
4P70X-ray3.68QC/XC1-239[»]
4TUAX-ray3.60QC/XC1-239[»]
4TUBX-ray3.60QC/XC1-239[»]
4TUCX-ray3.60QC/XC1-239[»]
4TUDX-ray3.60QC/XC1-239[»]
4TUEX-ray3.50QC/XC1-239[»]
4V42X-ray5.50AF1-239[»]
4V49X-ray8.70C2-207[»]
4V4AX-ray9.50C2-207[»]
4V4PX-ray5.50F1-239[»]
4V4RX-ray5.90AC1-239[»]
4V4SX-ray6.76AC1-239[»]
4V4TX-ray6.46AC1-239[»]
4V4XX-ray5.00AF1-239[»]
4V4YX-ray5.50AF1-239[»]
4V4ZX-ray4.51AF1-239[»]
4V51X-ray2.80AC/CC2-239[»]
4V5AX-ray3.50AC/CC2-239[»]
4V5CX-ray3.30AC/CC1-239[»]
4V5DX-ray3.50AC/CC1-239[»]
4V5EX-ray3.45AC/CC1-239[»]
4V5FX-ray3.60AC/CC1-239[»]
4V5GX-ray3.60AC/CC1-239[»]
4V5JX-ray3.10AC/CC1-239[»]
4V5KX-ray3.20AC/CC1-239[»]
4V5LX-ray3.10AC1-239[»]
4V5Melectron microscopy7.80AC1-239[»]
4V5Nelectron microscopy7.60AC1-239[»]
4V5PX-ray3.10AC/CC1-239[»]
4V5QX-ray3.10AC/CC1-239[»]
4V5RX-ray3.10AC/CC1-239[»]
4V5SX-ray3.10AC/CC1-239[»]
4V68electron microscopy6.40AC2-208[»]
4V6AX-ray3.10AC/CC1-239[»]
4V6FX-ray3.10BF/CF1-239[»]
4V6GX-ray3.50AF/CF1-239[»]
4V7JX-ray3.30Ac/Bc1-239[»]
4V7KX-ray3.60Ac/Bc1-239[»]
4V7LX-ray3.00AC/CC1-239[»]
4V7MX-ray3.45AC/CC1-239[»]
4V7WX-ray3.00AC/CC1-239[»]
4V7XX-ray3.00AC/CC1-239[»]
4V7YX-ray3.00AC/CC1-239[»]
4V7ZX-ray3.10AC/CC1-239[»]
4V87X-ray3.10BF/CF1-239[»]
4V8AX-ray3.20CC/DC1-239[»]
4V8BX-ray3.00AF/CF1-239[»]
4V8CX-ray3.30CF/DF1-239[»]
4V8DX-ray3.00AF/CF1-239[»]
4V8EX-ray3.30BF/DF1-239[»]
4V8FX-ray3.30BF/CF1-239[»]
4V8GX-ray3.00AC/CC1-239[»]
4V8HX-ray3.10AC/CC1-239[»]
4V8IX-ray2.70AC/CC1-239[»]
4V8JX-ray3.90AC/CC1-239[»]
4V8NX-ray3.10AC/CC1-239[»]
4V8OX-ray3.80AC1-239[»]
4V8QX-ray3.10BC1-239[»]
4V8UX-ray3.70AC/CC1-239[»]
4V8XX-ray3.35AC/CC1-239[»]
4V90X-ray2.95AC1-239[»]
4V95X-ray3.20AC/CC1-239[»]
4V97X-ray3.52AC/CC1-239[»]
4V9AX-ray3.30AF/CF1-239[»]
4V9BX-ray3.10AF/CF1-239[»]
4V9HX-ray2.86AC2-207[»]
4V9IX-ray3.30AC/CC2-207[»]
4V9RX-ray3.00AC/CC1-239[»]
4V9SX-ray3.10AC/CC1-239[»]
4W2EX-ray2.90c1-239[»]
4W2FX-ray2.40AC/CC1-239[»]
4W2GX-ray2.55AC/CC1-239[»]
4W2HX-ray2.70AC/CC1-239[»]
4W2IX-ray2.70AC/CC1-239[»]
4W4GX-ray3.30QC/XC1-239[»]
4WPOX-ray2.80BC/DC1-239[»]
4WQ1X-ray3.1022/2E1-239[»]
4WQFX-ray2.80BC/DC1-239[»]
4WQRX-ray3.1522/2E1-239[»]
4WQUX-ray2.80BC/DC1-239[»]
4WQYX-ray2.80BC/DC1-239[»]
4WR6X-ray3.0522/2E1-239[»]
4WRAX-ray3.0522/2E1-239[»]
4WROX-ray3.0522/2E1-239[»]
4WSDX-ray2.9522/2E1-239[»]
4WSMX-ray3.3022/2E1-239[»]
4WT1X-ray3.0522/2E1-239[»]
4WT8X-ray3.40AC1-238[»]
BC2-207[»]
4WU1X-ray3.2022/2E1-239[»]
4WZDX-ray3.1022/2E1-239[»]
4WZOX-ray3.3022/2E1-239[»]
4X62X-ray3.45C2-208[»]
4X64X-ray3.35C2-208[»]
4X65X-ray3.35C2-208[»]
4X66X-ray3.45C2-208[»]
4Y4OX-ray2.301c/2c1-239[»]
4Y4PX-ray2.501c/2c1-239[»]
4YHHX-ray3.42C2-207[»]
4YPBX-ray3.40QC/XC1-239[»]
4YY3X-ray3.60C1-239[»]
4YZVX-ray3.10QC/XC1-239[»]
4Z3SX-ray2.651c/2c1-239[»]
4Z8CX-ray2.901c/2c1-239[»]
4ZERX-ray3.101c/2c2-207[»]
4ZSNX-ray3.60QC/XC1-239[»]
5A9Zelectron microscopy4.70BG2-207[»]
5AA0electron microscopy5.00BG2-207[»]
5BR8X-ray3.40C1-239[»]
5CZPX-ray3.30QC/XC1-239[»]
5D8BX-ray3.63DA/ZB1-239[»]
5DFEX-ray3.10QC/XC1-239[»]
5DOXX-ray3.101c/2c1-239[»]
5DOYX-ray2.601c/2c1-239[»]
5E7KX-ray3.2022/2E1-239[»]
5E81X-ray2.9522/2E1-239[»]
5EL4X-ray3.1522/2E1-239[»]
5EL5X-ray3.1522/2E1-239[»]
5EL6X-ray3.1022/2E1-239[»]
5EL7X-ray3.1522/2E1-239[»]
5F8KX-ray2.801c/2c2-207[»]
5FDUX-ray2.901c/2c2-207[»]
5FDVX-ray2.801c/2c2-207[»]
5HAUX-ray3.001c/2c1-239[»]
5HCPX-ray2.891c/2c1-239[»]
5HCQX-ray2.801c/2c1-239[»]
5HCRX-ray2.801c/2c1-239[»]
5HD1X-ray2.701c/2c1-239[»]
5IB7X-ray2.9922/2E1-239[»]
5IB8X-ray3.1322/2E1-239[»]
5IBBX-ray2.9622/2E1-239[»]
5IMQelectron microscopy3.80G1-239[»]
5IMRelectron microscopy-G1-239[»]
5IWAX-ray3.50C2-207[»]
5J30X-ray3.20QC/XC1-239[»]
5J3CX-ray3.04QC/XC1-239[»]
5J4BX-ray2.601c/2c1-239[»]
5J4CX-ray2.801c/2c1-239[»]
5J8BX-ray2.60c1-239[»]
5LMNelectron microscopy3.55C1-239[»]
5LMOelectron microscopy4.30C1-239[»]
5LMPelectron microscopy5.35C1-239[»]
5LMQelectron microscopy4.20C1-239[»]
5LMRelectron microscopy4.45C1-239[»]
5LMSelectron microscopy5.10C1-239[»]
5LMTelectron microscopy4.15C1-239[»]
5LMUelectron microscopy4.00C1-239[»]
5LMVelectron microscopy4.90C1-239[»]
5NDJX-ray3.1522/2E1-239[»]
5NDKX-ray2.9522/2E1-239[»]
5OT7electron microscopy3.80B2-208[»]
5UQ7electron microscopy3.50c2-207[»]
5UQ8electron microscopy3.20c2-207[»]
5VP2X-ray2.801c/2c1-239[»]
5VPOX-ray3.34QC/XC1-239[»]
5VPPX-ray3.90QC/XC1-239[»]
5W4KX-ray2.701c/2c1-239[»]
5WISX-ray2.701c/2c1-239[»]
5WITX-ray2.601c/2c1-239[»]
5WNPX-ray3.30C2-208[»]
5WNQX-ray3.50C2-207[»]
5WNRX-ray3.50C2-207[»]
5WNSX-ray3.50C2-207[»]
5WNTX-ray3.30C2-208[»]
5WNUX-ray3.40C2-208[»]
5WNVX-ray3.30C2-208[»]
5ZLUelectron microscopy3.60I1-239[»]
6BUWX-ray3.50QC/XC1-239[»]
6BZ6X-ray3.18QC/XC1-239[»]
6BZ7X-ray3.68QC/XC1-239[»]
6BZ8X-ray3.74QC/XC1-239[»]
6CAEX-ray2.601c/2c1-239[»]
6CAOX-ray3.45C2-208[»]
6CAPX-ray3.40C2-207[»]
6CAQX-ray3.40C2-207[»]
6CARX-ray3.40C2-239[»]
6CASX-ray3.50C2-239[»]
6FKRX-ray3.201c/2c2-207[»]
6GSJX-ray2.9622/2E1-239[»]
6GSKX-ray3.3622/2E1-239[»]
6GSLX-ray3.1622/2E1-239[»]
6GZQelectron microscopy3.28C22-207[»]
6GZXelectron microscopy4.57C3/C42-207[»]
6GZZelectron microscopy4.13C3/C42-207[»]

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

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ProteinModelPortali
P80372

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
P80372

Database of comparative protein structure models

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ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

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EvolutionaryTracei
P80372

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini39 – 107KH type-2Add BLAST69

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4105CKE Bacteria
COG0092 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

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HOGENOMi
HOG000210610

KEGG Orthology (KO)

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KOi
K02982

Identification of Orthologs from Complete Genome Data

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OMAi
KTNPIGN

Database for complete collections of gene phylogenies

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PhylomeDBi
P80372

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
3.30.1140.32, 1 hit
3.30.300.20, 1 hit

HAMAP database of protein families

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HAMAPi
MF_01309_B Ribosomal_S3_B, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR004087 KH_dom
IPR015946 KH_dom-like_a/b
IPR004044 KH_dom_type_2
IPR009019 KH_sf_prok-type
IPR005704 Ribosomal_S3_bac
IPR001351 Ribosomal_S3_C
IPR036419 Ribosomal_S3_C_sf
IPR018280 Ribosomal_S3_CS

The PANTHER Classification System

More...
PANTHERi
PTHR11760:SF19 PTHR11760:SF19, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF07650 KH_2, 1 hit
PF00189 Ribosomal_S3_C, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

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SMARTi
View protein in SMART
SM00322 KH, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF54814 SSF54814, 1 hit
SSF54821 SSF54821, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR01009 rpsC_bact, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50823 KH_TYPE_2, 1 hit
PS00548 RIBOSOMAL_S3, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

P80372-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGNKIHPIGF RLGITRDWES RWYAGKKQYR HLLLEDQRIR GLLEKELYSA
60 70 80 90 100
GLARVDIERA ADNVAVTVHV AKPGVVIGRG GERIRVLREE LAKLTGKNVA
110 120 130 140 150
LNVQEVQNPN LSAPLVAQRV AEQIERRFAV RRAIKQAVQR VMESGAKGAK
160 170 180 190 200
VIVSGRIGGA EQARTEWAAQ GRVPLHTLRA NIDYGFALAR TTYGVLGVKA
210 220 230
YIFLGEVIGG QKPKARPELP KAEERPRRRR PAVRVKKEE
Length:239
Mass (Da):26,701
Last modified:January 23, 2007 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAD585A1D53AC7F04
GO

<p>This subsection of the ‘Sequence’ section reports information derived from mass spectrometry experiments done on the entire protein or on biologically active derived peptide(s).<p><a href='/help/mass_spectrometry' target='_top'>More...</a></p>Mass spectrometryi

Molecular mass is 26570 Da from positions 2 - 239. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD71509.1

NCBI Reference Sequences

More...
RefSeqi
WP_008633418.1, NC_006461.1
YP_144952.1, NC_006461.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
BAD71509; BAD71509; BAD71509

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
3168725

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ttj:TTHA1686

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|300852.9.peg.1656

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD71509.1
RefSeqiWP_008633418.1, NC_006461.1
YP_144952.1, NC_006461.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00C1-239[»]
1HNWX-ray3.40C1-239[»]
1HNXX-ray3.40C1-239[»]
1HNZX-ray3.30C1-239[»]
1HR0X-ray3.20C1-239[»]
1I94X-ray3.20C2-239[»]
1I95X-ray4.50C2-239[»]
1I96X-ray4.20C2-239[»]
1I97X-ray4.50C2-239[»]
1IBKX-ray3.31C1-239[»]
1IBLX-ray3.11C1-239[»]
1IBMX-ray3.31C1-239[»]
1J5EX-ray3.05C1-239[»]
1L1Umodel-C1-207[»]
1ML5electron microscopy14.00F1-239[»]
1N32X-ray3.00C1-239[»]
1N33X-ray3.35C1-239[»]
1N34X-ray3.80C1-239[»]
1N36X-ray3.65C1-239[»]
1VVJX-ray3.44QC/XC1-239[»]
1VY4X-ray2.60AC/CC1-239[»]
1VY5X-ray2.55AC/CC1-239[»]
1VY6X-ray2.90AC/CC1-239[»]
1VY7X-ray2.80AC/CC1-239[»]
1XMOX-ray3.25C1-239[»]
1XMQX-ray3.00C1-239[»]
1XNQX-ray3.05C1-239[»]
1XNRX-ray3.10C1-239[»]
2E5LX-ray3.30C2-239[»]
2F4VX-ray3.80C1-239[»]
2HHHX-ray3.35C1-239[»]
2UU9X-ray3.10C2-239[»]
2UUAX-ray2.90C2-239[»]
2UUBX-ray2.80C2-239[»]
2UUCX-ray3.10C2-239[»]
2UXBX-ray3.10C2-239[»]
2UXCX-ray2.90C2-239[»]
2UXDX-ray3.20C2-239[»]
2VQEX-ray2.50C1-239[»]
2VQFX-ray2.90C1-239[»]
2ZM6X-ray3.30C2-239[»]
3OTOX-ray3.69C1-239[»]
3T1HX-ray3.11C1-239[»]
3T1YX-ray2.80C1-239[»]
4AQYX-ray3.50C1-239[»]
4B3MX-ray2.90C1-239[»]
4B3RX-ray3.00C1-239[»]
4B3SX-ray3.15C1-239[»]
4B3TX-ray3.00C1-239[»]
4DR1X-ray3.60C1-239[»]
4DR2X-ray3.25C1-239[»]
4DR3X-ray3.35C1-239[»]
4DR4X-ray3.97C1-239[»]
4DR5X-ray3.45C1-239[»]
4DR6X-ray3.30C1-239[»]
4DR7X-ray3.75C1-239[»]
4DUYX-ray3.39C1-239[»]
4DUZX-ray3.65C1-239[»]
4DV0X-ray3.85C1-239[»]
4DV1X-ray3.85C1-239[»]
4DV2X-ray3.65C1-239[»]
4DV3X-ray3.55C1-239[»]
4DV4X-ray3.65C1-239[»]
4DV5X-ray3.68C1-239[»]
4DV6X-ray3.30C1-239[»]
4DV7X-ray3.29C1-239[»]
4GKJX-ray3.30C2-207[»]
4GKKX-ray3.20C2-207[»]
4JI0X-ray3.49C1-239[»]
4JI1X-ray3.14C1-239[»]
4JI2X-ray3.64C1-239[»]
4JI3X-ray3.35C1-239[»]
4JI4X-ray3.69C1-239[»]
4JI5X-ray3.85C1-239[»]
4JI6X-ray3.55C1-239[»]
4JI7X-ray3.50C1-239[»]
4JI8X-ray3.74C1-239[»]
4JV5X-ray3.16C2-207[»]
4JYAX-ray3.10C2-207[»]
4K0KX-ray3.40C2-208[»]
4KHPX-ray3.10C2-207[»]
4L47X-ray3.22QC/XC1-239[»]
4L71X-ray3.90QC/XC1-239[»]
4LELX-ray3.90QC/XC1-239[»]
4LF4X-ray3.34C1-239[»]
4LF5X-ray3.75C1-239[»]
4LF6X-ray3.31C1-239[»]
4LF7X-ray3.15C1-239[»]
4LF8X-ray3.15C1-239[»]
4LF9X-ray3.28C1-239[»]
4LFAX-ray3.65C1-239[»]
4LFBX-ray3.01C1-239[»]
4LFCX-ray3.60C1-239[»]
4LFZX-ray3.92QC/XC1-239[»]
4LNTX-ray2.94QC/XC1-239[»]
4LSKX-ray3.48QC/XC1-239[»]
4LT8X-ray3.14QC/XC1-239[»]
4NXMX-ray3.65C1-239[»]
4NXNX-ray3.54C1-239[»]
4OX9X-ray3.80C1-239[»]
4P6FX-ray3.60QC/XC1-239[»]
4P70X-ray3.68QC/XC1-239[»]
4TUAX-ray3.60QC/XC1-239[»]
4TUBX-ray3.60QC/XC1-239[»]
4TUCX-ray3.60QC/XC1-239[»]
4TUDX-ray3.60QC/XC1-239[»]
4TUEX-ray3.50QC/XC1-239[»]
4V42X-ray5.50AF1-239[»]
4V49X-ray8.70C2-207[»]
4V4AX-ray9.50C2-207[»]
4V4PX-ray5.50F1-239[»]
4V4RX-ray5.90AC1-239[»]
4V4SX-ray6.76AC1-239[»]
4V4TX-ray6.46AC1-239[»]
4V4XX-ray5.00AF1-239[»]
4V4YX-ray5.50AF1-239[»]
4V4ZX-ray4.51AF1-239[»]
4V51X-ray2.80AC/CC2-239[»]
4V5AX-ray3.50AC/CC2-239[»]
4V5CX-ray3.30AC/CC1-239[»]
4V5DX-ray3.50AC/CC1-239[»]
4V5EX-ray3.45AC/CC1-239[»]
4V5FX-ray3.60AC/CC1-239[»]
4V5GX-ray3.60AC/CC1-239[»]
4V5JX-ray3.10AC/CC1-239[»]
4V5KX-ray3.20AC/CC1-239[»]
4V5LX-ray3.10AC1-239[»]
4V5Melectron microscopy7.80AC1-239[»]
4V5Nelectron microscopy7.60AC1-239[»]
4V5PX-ray3.10AC/CC1-239[»]
4V5QX-ray3.10AC/CC1-239[»]
4V5RX-ray3.10AC/CC1-239[»]
4V5SX-ray3.10AC/CC1-239[»]
4V68electron microscopy6.40AC2-208[»]
4V6AX-ray3.10AC/CC1-239[»]
4V6FX-ray3.10BF/CF1-239[»]
4V6GX-ray3.50AF/CF1-239[»]
4V7JX-ray3.30Ac/Bc1-239[»]
4V7KX-ray3.60Ac/Bc1-239[»]
4V7LX-ray3.00AC/CC1-239[»]
4V7MX-ray3.45AC/CC1-239[»]
4V7WX-ray3.00AC/CC1-239[»]
4V7XX-ray3.00AC/CC1-239[»]
4V7YX-ray3.00AC/CC1-239[»]
4V7ZX-ray3.10AC/CC1-239[»]
4V87X-ray3.10BF/CF1-239[»]
4V8AX-ray3.20CC/DC1-239[»]
4V8BX-ray3.00AF/CF1-239[»]
4V8CX-ray3.30CF/DF1-239[»]
4V8DX-ray3.00AF/CF1-239[»]
4V8EX-ray3.30BF/DF1-239[»]
4V8FX-ray3.30BF/CF1-239[»]
4V8GX-ray3.00AC/CC1-239[»]
4V8HX-ray3.10AC/CC1-239[»]
4V8IX-ray2.70AC/CC1-239[»]
4V8JX-ray3.90AC/CC1-239[»]
4V8NX-ray3.10AC/CC1-239[»]
4V8OX-ray3.80AC1-239[»]
4V8QX-ray3.10BC1-239[»]
4V8UX-ray3.70AC/CC1-239[»]
4V8XX-ray3.35AC/CC1-239[»]
4V90X-ray2.95AC1-239[»]
4V95X-ray3.20AC/CC1-239[»]
4V97X-ray3.52AC/CC1-239[»]
4V9AX-ray3.30AF/CF1-239[»]
4V9BX-ray3.10AF/CF1-239[»]
4V9HX-ray2.86AC2-207[»]
4V9IX-ray3.30AC/CC2-207[»]
4V9RX-ray3.00AC/CC1-239[»]
4V9SX-ray3.10AC/CC1-239[»]
4W2EX-ray2.90c1-239[»]
4W2FX-ray2.40AC/CC1-239[»]
4W2GX-ray2.55AC/CC1-239[»]
4W2HX-ray2.70AC/CC1-239[»]
4W2IX-ray2.70AC/CC1-239[»]
4W4GX-ray3.30QC/XC1-239[»]
4WPOX-ray2.80BC/DC1-239[»]
4WQ1X-ray3.1022/2E1-239[»]
4WQFX-ray2.80BC/DC1-239[»]
4WQRX-ray3.1522/2E1-239[»]
4WQUX-ray2.80BC/DC1-239[»]
4WQYX-ray2.80BC/DC1-239[»]
4WR6X-ray3.0522/2E1-239[»]
4WRAX-ray3.0522/2E1-239[»]
4WROX-ray3.0522/2E1-239[»]
4WSDX-ray2.9522/2E1-239[»]
4WSMX-ray3.3022/2E1-239[»]
4WT1X-ray3.0522/2E1-239[»]
4WT8X-ray3.40AC1-238[»]
BC2-207[»]
4WU1X-ray3.2022/2E1-239[»]
4WZDX-ray3.1022/2E1-239[»]
4WZOX-ray3.3022/2E1-239[»]
4X62X-ray3.45C2-208[»]
4X64X-ray3.35C2-208[»]
4X65X-ray3.35C2-208[»]
4X66X-ray3.45C2-208[»]
4Y4OX-ray2.301c/2c1-239[»]
4Y4PX-ray2.501c/2c1-239[»]
4YHHX-ray3.42C2-207[»]
4YPBX-ray3.40QC/XC1-239[»]
4YY3X-ray3.60C1-239[»]
4YZVX-ray3.10QC/XC1-239[»]
4Z3SX-ray2.651c/2c1-239[»]
4Z8CX-ray2.901c/2c1-239[»]
4ZERX-ray3.101c/2c2-207[»]
4ZSNX-ray3.60QC/XC1-239[»]
5A9Zelectron microscopy4.70BG2-207[»]
5AA0electron microscopy5.00BG2-207[»]
5BR8X-ray3.40C1-239[»]
5CZPX-ray3.30QC/XC1-239[»]
5D8BX-ray3.63DA/ZB1-239[»]
5DFEX-ray3.10QC/XC1-239[»]
5DOXX-ray3.101c/2c1-239[»]
5DOYX-ray2.601c/2c1-239[»]
5E7KX-ray3.2022/2E1-239[»]
5E81X-ray2.9522/2E1-239[»]
5EL4X-ray3.1522/2E1-239[»]
5EL5X-ray3.1522/2E1-239[»]
5EL6X-ray3.1022/2E1-239[»]
5EL7X-ray3.1522/2E1-239[»]
5F8KX-ray2.801c/2c2-207[»]
5FDUX-ray2.901c/2c2-207[»]
5FDVX-ray2.801c/2c2-207[»]
5HAUX-ray3.001c/2c1-239[»]
5HCPX-ray2.891c/2c1-239[»]
5HCQX-ray2.801c/2c1-239[»]
5HCRX-ray2.801c/2c1-239[»]
5HD1X-ray2.701c/2c1-239[»]
5IB7X-ray2.9922/2E1-239[»]
5IB8X-ray3.1322/2E1-239[»]
5IBBX-ray2.9622/2E1-239[»]
5IMQelectron microscopy3.80G1-239[»]
5IMRelectron microscopy-G1-239[»]
5IWAX-ray3.50C2-207[»]
5J30X-ray3.20QC/XC1-239[»]
5J3CX-ray3.04QC/XC1-239[»]
5J4BX-ray2.601c/2c1-239[»]
5J4CX-ray2.801c/2c1-239[»]
5J8BX-ray2.60c1-239[»]
5LMNelectron microscopy3.55C1-239[»]
5LMOelectron microscopy4.30C1-239[»]
5LMPelectron microscopy5.35C1-239[»]
5LMQelectron microscopy4.20C1-239[»]
5LMRelectron microscopy4.45C1-239[»]
5LMSelectron microscopy5.10C1-239[»]
5LMTelectron microscopy4.15C1-239[»]
5LMUelectron microscopy4.00C1-239[»]
5LMVelectron microscopy4.90C1-239[»]
5NDJX-ray3.1522/2E1-239[»]
5NDKX-ray2.9522/2E1-239[»]
5OT7electron microscopy3.80B2-208[»]
5UQ7electron microscopy3.50c2-207[»]
5UQ8electron microscopy3.20c2-207[»]
5VP2X-ray2.801c/2c1-239[»]
5VPOX-ray3.34QC/XC1-239[»]
5VPPX-ray3.90QC/XC1-239[»]
5W4KX-ray2.701c/2c1-239[»]
5WISX-ray2.701c/2c1-239[»]
5WITX-ray2.601c/2c1-239[»]
5WNPX-ray3.30C2-208[»]
5WNQX-ray3.50C2-207[»]
5WNRX-ray3.50C2-207[»]
5WNSX-ray3.50C2-207[»]
5WNTX-ray3.30C2-208[»]
5WNUX-ray3.40C2-208[»]
5WNVX-ray3.30C2-208[»]
5ZLUelectron microscopy3.60I1-239[»]
6BUWX-ray3.50QC/XC1-239[»]
6BZ6X-ray3.18QC/XC1-239[»]
6BZ7X-ray3.68QC/XC1-239[»]
6BZ8X-ray3.74QC/XC1-239[»]
6CAEX-ray2.601c/2c1-239[»]
6CAOX-ray3.45C2-208[»]
6CAPX-ray3.40C2-207[»]
6CAQX-ray3.40C2-207[»]
6CARX-ray3.40C2-239[»]
6CASX-ray3.50C2-239[»]
6FKRX-ray3.201c/2c2-207[»]
6GSJX-ray2.9622/2E1-239[»]
6GSKX-ray3.3622/2E1-239[»]
6GSLX-ray3.1622/2E1-239[»]
6GZQelectron microscopy3.28C22-207[»]
6GZXelectron microscopy4.57C3/C42-207[»]
6GZZelectron microscopy4.13C3/C42-207[»]
ProteinModelPortaliP80372
SMRiP80372
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA1686

Chemistry databases

DrugBankiDB08185 2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD71509; BAD71509; BAD71509
GeneIDi3168725
KEGGittj:TTHA1686
PATRICifig|300852.9.peg.1656

Phylogenomic databases

eggNOGiENOG4105CKE Bacteria
COG0092 LUCA
HOGENOMiHOG000210610
KOiK02982
OMAiKTNPIGN
PhylomeDBiP80372

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-1692-MONOMER

Miscellaneous databases

EvolutionaryTraceiP80372

Family and domain databases

Gene3Di3.30.1140.32, 1 hit
3.30.300.20, 1 hit
HAMAPiMF_01309_B Ribosomal_S3_B, 1 hit
InterProiView protein in InterPro
IPR004087 KH_dom
IPR015946 KH_dom-like_a/b
IPR004044 KH_dom_type_2
IPR009019 KH_sf_prok-type
IPR005704 Ribosomal_S3_bac
IPR001351 Ribosomal_S3_C
IPR036419 Ribosomal_S3_C_sf
IPR018280 Ribosomal_S3_CS
PANTHERiPTHR11760:SF19 PTHR11760:SF19, 1 hit
PfamiView protein in Pfam
PF07650 KH_2, 1 hit
PF00189 Ribosomal_S3_C, 1 hit
SMARTiView protein in SMART
SM00322 KH, 1 hit
SUPFAMiSSF54814 SSF54814, 1 hit
SSF54821 SSF54821, 1 hit
TIGRFAMsiTIGR01009 rpsC_bact, 1 hit
PROSITEiView protein in PROSITE
PS50823 KH_TYPE_2, 1 hit
PS00548 RIBOSOMAL_S3, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRS3_THET8
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P80372
Secondary accession number(s): Q5SHP4, Q9ACK0
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2007
Last modified: January 16, 2019
This is version 171 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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