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Protein

30S ribosomal protein S2

Gene

rpsB

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-880-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S2
Gene namesi
Name:rpsB
Synonyms:rps2
Ordered Locus Names:TTHA0861
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Pathology & Biotechi

Chemistry databases

DrugBankiDB08185 2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001342642 – 25630S ribosomal protein S2Add BLAST255

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts protein S8 and may contact the N-terminus of Era.

Protein-protein interaction databases

STRINGi300852.TTHA0861

Structurei

Secondary structure

1256
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP80371
SMRiP80371
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP80371

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili104 – 149Add BLAST46

Sequence similaritiesi

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG4105CE9 Bacteria
COG0052 LUCA
HOGENOMiHOG000071892
KOiK02967
OMAiSYIDRAY
PhylomeDBiP80371

Family and domain databases

CDDicd01425 RPS2, 1 hit
HAMAPiMF_00291_B Ribosomal_S2_B, 1 hit
InterProiView protein in InterPro
IPR001865 Ribosomal_S2
IPR005706 Ribosomal_S2_bac/mit/plastid
IPR018130 Ribosomal_S2_CS
IPR023591 Ribosomal_S2_flav_dom_sf
PANTHERiPTHR12534 PTHR12534, 1 hit
PfamiView protein in Pfam
PF00318 Ribosomal_S2, 1 hit
PRINTSiPR00395 RIBOSOMALS2
SUPFAMiSSF52313 SSF52313, 1 hit
TIGRFAMsiTIGR01011 rpsB_bact, 1 hit
PROSITEiView protein in PROSITE
PS00962 RIBOSOMAL_S2_1, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P80371-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPVEITVKEL LEAGVHFGHE RKRWNPKFAR YIYAERNGIH IIDLQKTMEE
60 70 80 90 100
LERTFRFIED LAMRGGTILF VGTKKQAQDI VRMEAERAGM PYVNQRWLGG
110 120 130 140 150
MLTNFKTISQ RVHRLEELEA LFASPEIEER PKKEQVRLKH ELERLQKYLS
160 170 180 190 200
GFRLLKRLPD AIFVVDPTKE AIAVREARKL FIPVIALADT DSDPDLVDYI
210 220 230 240 250
IPGNDDAIRS IQLILSRAVD LIIQARGGVV EPSPSYALVQ EAEATETPEG

ESEVEA
Length:256
Mass (Da):29,277
Last modified:January 23, 2007 - v4
Checksum:i65D7958336911CE5
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti19H → N AA sequence (PubMed:7957245).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD70684.1
X83598 Genomic DNA Translation: CAA58577.1
PIRiS51053
RefSeqiWP_011172954.1, NC_006461.1
YP_144127.1, NC_006461.1

Genome annotation databases

EnsemblBacteriaiBAD70684; BAD70684; BAD70684
GeneIDi3170121
KEGGittj:TTHA0861
PATRICifig|300852.9.peg.855

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD70684.1
X83598 Genomic DNA Translation: CAA58577.1
PIRiS51053
RefSeqiWP_011172954.1, NC_006461.1
YP_144127.1, NC_006461.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00B1-256[»]
1HNWX-ray3.40B1-256[»]
1HNXX-ray3.40B1-256[»]
1HNZX-ray3.30B1-256[»]
1HR0X-ray3.20B1-256[»]
1I94X-ray3.20B2-256[»]
1I95X-ray4.50B2-256[»]
1I96X-ray4.20B2-256[»]
1I97X-ray4.50B2-256[»]
1IBKX-ray3.31B1-256[»]
1IBLX-ray3.11B1-256[»]
1IBMX-ray3.31B1-256[»]
1J5EX-ray3.05B1-256[»]
1JGOX-ray5.60E1-256[»]
1JGPX-ray7.00E1-256[»]
1JGQX-ray5.00E1-256[»]
1L1Umodel-B7-240[»]
1ML5electron microscopy14.00E1-256[»]
1N32X-ray3.00B1-256[»]
1N33X-ray3.35B1-256[»]
1N34X-ray3.80B1-256[»]
1N36X-ray3.65B1-256[»]
1VVJX-ray3.44QB/XB1-256[»]
1VY4X-ray2.60AB/CB1-256[»]
1VY5X-ray2.55AB/CB1-256[»]
1VY6X-ray2.90AB/CB1-256[»]
1VY7X-ray2.80AB/CB1-256[»]
1X18electron microscopy13.50E7-240[»]
1XMOX-ray3.25B1-256[»]
1XMQX-ray3.00B1-256[»]
1XNQX-ray3.05B1-256[»]
1XNRX-ray3.10B1-256[»]
2E5LX-ray3.30B2-228[»]
2F4VX-ray3.80B1-256[»]
2HHHX-ray3.35B1-256[»]
2OM7electron microscopy7.30N1-256[»]
2UU9X-ray3.10B2-256[»]
2UUAX-ray2.90B2-256[»]
2UUBX-ray2.80B2-256[»]
2UUCX-ray3.10B2-256[»]
2UXBX-ray3.10B2-256[»]
2UXCX-ray2.90B2-256[»]
2UXDX-ray3.20B2-256[»]
2VQEX-ray2.50B1-256[»]
2VQFX-ray2.90B1-256[»]
2ZM6X-ray3.30B2-256[»]
3OTOX-ray3.69B1-256[»]
3T1HX-ray3.11B1-256[»]
3T1YX-ray2.80B1-256[»]
4AQYX-ray3.50B1-256[»]
4B3MX-ray2.90B1-256[»]
4B3RX-ray3.00B1-256[»]
4B3SX-ray3.15B1-256[»]
4B3TX-ray3.00B1-256[»]
4DR1X-ray3.60B1-256[»]
4DR2X-ray3.25B1-256[»]
4DR3X-ray3.35B1-256[»]
4DR4X-ray3.97B1-256[»]
4DR5X-ray3.45B1-256[»]
4DR6X-ray3.30B1-256[»]
4DR7X-ray3.75B1-256[»]
4DUYX-ray3.39B1-256[»]
4DUZX-ray3.65B1-256[»]
4DV0X-ray3.85B1-256[»]
4DV1X-ray3.85B1-256[»]
4DV2X-ray3.65B1-256[»]
4DV3X-ray3.55B1-256[»]
4DV4X-ray3.65B1-256[»]
4DV5X-ray3.68B1-256[»]
4DV6X-ray3.30B1-256[»]
4DV7X-ray3.29B1-256[»]
4GKJX-ray3.30B7-240[»]
4GKKX-ray3.20B7-240[»]
4JI0X-ray3.49B1-256[»]
4JI1X-ray3.14B1-256[»]
4JI2X-ray3.64B1-256[»]
4JI3X-ray3.35B1-256[»]
4JI4X-ray3.69B1-256[»]
4JI5X-ray3.85B1-256[»]
4JI6X-ray3.55B1-256[»]
4JI7X-ray3.50B1-256[»]
4JI8X-ray3.74B1-256[»]
4JV5X-ray3.16B7-240[»]
4JYAX-ray3.10B7-240[»]
4K0KX-ray3.40B7-241[»]
4KHPX-ray3.10B7-240[»]
4L47X-ray3.22QB/XB1-256[»]
4L71X-ray3.90QB/XB1-256[»]
4LELX-ray3.90QB/XB1-256[»]
4LF4X-ray3.34B1-256[»]
4LF5X-ray3.75B1-256[»]
4LF6X-ray3.31B1-256[»]
4LF7X-ray3.15B1-256[»]
4LF8X-ray3.15B1-256[»]
4LF9X-ray3.28B1-256[»]
4LFAX-ray3.65B1-256[»]
4LFBX-ray3.01B1-256[»]
4LFCX-ray3.60B1-256[»]
4LFZX-ray3.92QB/XB1-256[»]
4LNTX-ray2.94QB/XB1-256[»]
4LSKX-ray3.48QB/XB1-256[»]
4LT8X-ray3.14QB/XB1-256[»]
4NXMX-ray3.65B1-256[»]
4NXNX-ray3.54B1-256[»]
4OX9X-ray3.80B1-256[»]
4P6FX-ray3.60QB/XB1-256[»]
4P70X-ray3.68QB/XB1-256[»]
4TUAX-ray3.60QB/XB1-256[»]
4TUBX-ray3.60QB/XB1-256[»]
4TUCX-ray3.60QB/XB1-256[»]
4TUDX-ray3.60QB/XB1-256[»]
4TUEX-ray3.50QB/XB1-256[»]
4V42X-ray5.50AE1-256[»]
4V49X-ray8.70B7-240[»]
4V4AX-ray9.50B7-240[»]
4V4PX-ray5.50BE1-256[»]
4V4RX-ray5.90AB1-256[»]
4V4SX-ray6.76AB1-256[»]
4V4TX-ray6.46AB1-256[»]
4V4XX-ray5.00AE1-256[»]
4V4YX-ray5.50AE1-256[»]
4V4ZX-ray4.51AE1-256[»]
4V51X-ray2.80AB/CB2-256[»]
4V5AX-ray3.50AB/CB2-256[»]
4V5CX-ray3.30AB/CB1-256[»]
4V5DX-ray3.50AB/CB1-256[»]
4V5EX-ray3.45AB/CB1-256[»]
4V5FX-ray3.60AB/CB1-256[»]
4V5GX-ray3.60AB/CB1-256[»]
4V5JX-ray3.10AB/CB1-256[»]
4V5KX-ray3.20AB/CB1-256[»]
4V5LX-ray3.10AB1-256[»]
4V5Melectron microscopy7.80AB1-256[»]
4V5Nelectron microscopy7.60AB1-256[»]
4V5PX-ray3.10AB/CB1-256[»]
4V5QX-ray3.10AB/CB1-256[»]
4V5RX-ray3.10AB/CB1-256[»]
4V5SX-ray3.10AB/CB1-256[»]
4V68electron microscopy6.40AB7-241[»]
4V6AX-ray3.10AB/CB1-256[»]
4V6FX-ray3.10BE/CE1-256[»]
4V6GX-ray3.50AE/CE1-256[»]
4V7JX-ray3.30Ab/Bb1-256[»]
4V7KX-ray3.60Ab/Bb1-256[»]
4V7LX-ray3.00AB/CB1-256[»]
4V7MX-ray3.45AB/CB1-256[»]
4V7WX-ray3.00AB/CB1-256[»]
4V7XX-ray3.00AB/CB1-256[»]
4V7YX-ray3.00AB/CB1-256[»]
4V7ZX-ray3.10AB/CB1-256[»]
4V87X-ray3.10BE/CE1-256[»]
4V8AX-ray3.20CB/DB1-256[»]
4V8BX-ray3.00AE/CE1-256[»]
4V8CX-ray3.30CE/DE1-256[»]
4V8DX-ray3.00AE/CE1-256[»]
4V8EX-ray3.30BE/DE1-256[»]
4V8FX-ray3.30BE/CE1-256[»]
4V8GX-ray3.00AB/CB1-256[»]
4V8HX-ray3.10AB/CB1-256[»]
4V8IX-ray2.70AB/CB1-256[»]
4V8JX-ray3.90AB/CB1-256[»]
4V8NX-ray3.10AB/CB1-256[»]
4V8OX-ray3.80AB1-256[»]
4V8QX-ray3.10BB1-256[»]
4V8UX-ray3.70AB/CB1-256[»]
4V8XX-ray3.35AB/CB1-256[»]
4V90X-ray2.95AB1-256[»]
4V95X-ray3.20AB/CB1-256[»]
4V97X-ray3.52AB/CB1-256[»]
4V9AX-ray3.30AE/CE1-256[»]
4V9BX-ray3.10AE/CE1-256[»]
4V9HX-ray2.86AB7-240[»]
4V9IX-ray3.30AB/CB7-240[»]
4V9RX-ray3.00AB/CB1-256[»]
4V9SX-ray3.10AB/CB1-256[»]
4W2EX-ray2.90b1-256[»]
4W2FX-ray2.40AB/CB1-256[»]
4W2GX-ray2.55AB/CB1-256[»]
4W2HX-ray2.70AB/CB1-256[»]
4W2IX-ray2.70AB/CB1-256[»]
4W4GX-ray3.30QB/XB1-256[»]
4WPOX-ray2.80BB/DB1-256[»]
4WQ1X-ray3.1012/1E1-256[»]
4WQFX-ray2.80BB/DB1-256[»]
4WQRX-ray3.1512/1E1-256[»]
4WQUX-ray2.80BB/DB1-256[»]
4WQYX-ray2.80BB/DB1-256[»]
4WR6X-ray3.0512/1E1-256[»]
4WRAX-ray3.0512/1E1-256[»]
4WROX-ray3.0512/1E1-256[»]
4WSDX-ray2.9512/1E1-256[»]
4WSMX-ray3.3012/1E1-256[»]
4WT1X-ray3.0512/1E1-256[»]
4WT8X-ray3.40AA/BA7-240[»]
4WU1X-ray3.2012/1E1-256[»]
4WZDX-ray3.1012/1E1-256[»]
4WZOX-ray3.3012/1E1-256[»]
4X62X-ray3.45B6-241[»]
4X64X-ray3.35B6-241[»]
4X65X-ray3.35B6-241[»]
4X66X-ray3.45B6-241[»]
4Y4OX-ray2.301b/2b1-256[»]
4Y4PX-ray2.501b/2b1-256[»]
4YHHX-ray3.42B3-228[»]
4YPBX-ray3.40QB/XB1-256[»]
4YY3X-ray3.60B1-256[»]
4YZVX-ray3.10QB/XB1-256[»]
4Z3SX-ray2.651b/2b1-256[»]
4Z8CX-ray2.901b/2b1-256[»]
4ZERX-ray3.101b/2b7-237[»]
4ZSNX-ray3.60QB/XB1-256[»]
5A9Zelectron microscopy4.70BF7-240[»]
5AA0electron microscopy5.00BF7-240[»]
5BR8X-ray3.40B1-256[»]
5CZPX-ray3.30QB/XB1-256[»]
5D8BX-ray3.63CA/YB1-256[»]
5DFEX-ray3.10QB/XB1-256[»]
5DOXX-ray3.101b/2b1-256[»]
5DOYX-ray2.601b/2b1-256[»]
5E7KX-ray3.2012/1E1-256[»]
5E81X-ray2.9512/1E1-256[»]
5EL4X-ray3.1512/1E1-256[»]
5EL5X-ray3.1512/1E1-256[»]
5EL6X-ray3.1012/1E1-256[»]
5EL7X-ray3.1512/1E1-256[»]
5F8KX-ray2.801b/2b7-237[»]
5FDUX-ray2.901b/2b7-237[»]
5FDVX-ray2.801b/2b7-237[»]
5HAUX-ray3.001b/2b1-256[»]
5HCPX-ray2.891b/2b1-256[»]
5HCQX-ray2.801b/2b1-256[»]
5HCRX-ray2.801b/2b1-256[»]
5HD1X-ray2.701b/2b1-256[»]
5IB7X-ray2.9912/1E1-256[»]
5IB8X-ray3.1312/1E1-256[»]
5IBBX-ray2.9612/1E1-256[»]
5IMQelectron microscopy3.80F1-256[»]
5IMRelectron microscopy-F1-256[»]
5IWAX-ray3.50B3-228[»]
5J30X-ray3.20QB/XB1-256[»]
5J3CX-ray3.04QB/XB1-256[»]
5J4BX-ray2.601b/2b1-256[»]
5J4CX-ray2.801b/2b1-256[»]
5J8BX-ray2.60b1-256[»]
5LMNelectron microscopy3.55B1-256[»]
5LMOelectron microscopy4.30B1-256[»]
5LMPelectron microscopy5.35B1-256[»]
5LMQelectron microscopy4.20B1-256[»]
5LMRelectron microscopy4.45B1-256[»]
5LMSelectron microscopy5.10B1-256[»]
5LMTelectron microscopy4.15B1-256[»]
5LMUelectron microscopy4.00B1-256[»]
5LMVelectron microscopy4.90B1-256[»]
5NDJX-ray3.1512/1E1-256[»]
5NDKX-ray2.9512/1E1-256[»]
5OT7electron microscopy3.80A7-241[»]
5UQ7electron microscopy3.50b7-237[»]
5UQ8electron microscopy3.20b7-237[»]
5VP2X-ray2.801b/2b1-256[»]
5VPOX-ray3.34QB/XB1-256[»]
5VPPX-ray3.90QB/XB1-256[»]
5W4KX-ray2.701b/2b1-256[»]
5WISX-ray2.701b/2b1-256[»]
5WITX-ray2.601b/2b1-256[»]
5WNPX-ray3.30B6-241[»]
5WNQX-ray3.50B7-240[»]
5WNRX-ray3.50B7-240[»]
5WNSX-ray3.50B7-240[»]
5WNTX-ray3.30B6-241[»]
5WNUX-ray3.40B6-241[»]
5WNVX-ray3.30B6-241[»]
5ZLUelectron microscopy3.60H1-256[»]
6CAEX-ray2.601b/2b1-256[»]
6CAOX-ray3.45B6-241[»]
6CAPX-ray3.40B7-240[»]
6CAQX-ray3.40B7-240[»]
6CARX-ray3.40B2-256[»]
6CASX-ray3.50B2-256[»]
6FKRX-ray3.201b/2b7-237[»]
6GSJX-ray2.9612/1E1-256[»]
6GSKX-ray3.3612/1E1-256[»]
6GSLX-ray3.1612/1E1-256[»]
ProteinModelPortaliP80371
SMRiP80371
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA0861

Chemistry databases

DrugBankiDB08185 2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD70684; BAD70684; BAD70684
GeneIDi3170121
KEGGittj:TTHA0861
PATRICifig|300852.9.peg.855

Phylogenomic databases

eggNOGiENOG4105CE9 Bacteria
COG0052 LUCA
HOGENOMiHOG000071892
KOiK02967
OMAiSYIDRAY
PhylomeDBiP80371

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-880-MONOMER

Miscellaneous databases

EvolutionaryTraceiP80371

Family and domain databases

CDDicd01425 RPS2, 1 hit
HAMAPiMF_00291_B Ribosomal_S2_B, 1 hit
InterProiView protein in InterPro
IPR001865 Ribosomal_S2
IPR005706 Ribosomal_S2_bac/mit/plastid
IPR018130 Ribosomal_S2_CS
IPR023591 Ribosomal_S2_flav_dom_sf
PANTHERiPTHR12534 PTHR12534, 1 hit
PfamiView protein in Pfam
PF00318 Ribosomal_S2, 1 hit
PRINTSiPR00395 RIBOSOMALS2
SUPFAMiSSF52313 SSF52313, 1 hit
TIGRFAMsiTIGR01011 rpsB_bact, 1 hit
PROSITEiView protein in PROSITE
PS00962 RIBOSOMAL_S2_1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRS2_THET8
AccessioniPrimary (citable) accession number: P80371
Secondary accession number(s): Q5SJZ1, Q9ACK1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2007
Last modified: November 7, 2018
This is version 175 of the entry and version 4 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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