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Protein

50S ribosomal protein L32

Gene

rpmF

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Found on the solvent side of the large subunit.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-432-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L32
Gene namesi
Name:rpmF
Synonyms:rpl32
Ordered Locus Names:TTHA0418
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved2 Publications
ChainiPRO_00001724272 – 6050S ribosomal protein L32Add BLAST59

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Protein-protein interaction databases

STRINGi300852.TTHA0418

Structurei

Secondary structure

160
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi13 – 19Combined sources7
Helixi20 – 23Combined sources4
Beta strandi34 – 37Combined sources4
Beta strandi52 – 54Combined sources3

3D structure databases

ProteinModelPortaliP80339
SMRiP80339
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP80339

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG41067VY Bacteria
COG0333 LUCA
HOGENOMiHOG000040268
KOiK02911
OMAiHRACRHC
PhylomeDBiP80339

Family and domain databases

HAMAPiMF_00340 Ribosomal_L32, 1 hit
InterProiView protein in InterPro
IPR002677 Ribosomal_L32p
IPR011332 Ribosomal_zn-bd
PANTHERiPTHR35534 PTHR35534, 1 hit
PfamiView protein in Pfam
PF01783 Ribosomal_L32p, 1 hit
SUPFAMiSSF57829 SSF57829, 1 hit
TIGRFAMsiTIGR01031 rpmF_bact, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P80339-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKHPVPKKK TSKARRDARR SHHALTPPTL VPCPECKAMK PPHTVCPECG
60
YYAGRKVLEV
Length:60
Mass (Da):6,705
Last modified:January 23, 2007 - v5
Checksum:i3B972CB90FF2DE59
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti17D → A AA sequence (PubMed:11154066).Curated1
Sequence conflicti32 – 33PC → VP AA sequence (Ref. 2) Curated2
Sequence conflicti36C → I AA sequence (Ref. 2) Curated1
Sequence conflicti41P → H AA sequence (Ref. 2) Curated1

Mass spectrometryi

Molecular mass is 6575 Da from positions 2 - 60. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD70241.1
RefSeqiWP_008631660.1, NC_006461.1
YP_143684.1, NC_006461.1

Genome annotation databases

EnsemblBacteriaiBAD70241; BAD70241; BAD70241
GeneIDi3168304
KEGGittj:TTHA0418
PATRICifig|300852.9.peg.418

Similar proteinsi

Entry informationi

Entry nameiRL32_THET8
AccessioniPrimary (citable) accession number: P80339
Secondary accession number(s): O05480, Q5SL75
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: January 23, 2007
Last modified: July 18, 2018
This is version 144 of the entry and version 5 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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