UniProtKB - P77804 (YDGA_ECOLI)
Protein
Protein YdgA
Gene
ydgA
Organism
Escherichia coli (strain K12)
Status
Functioni
GO - Molecular functioni
- identical protein binding Source: IntAct
Enzyme and pathway databases
BioCyci | EcoCyc:G6865-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Protein YdgA |
Gene namesi | Name:ydgA Ordered Locus Names:b1614, JW1606 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
Subcellular locationi
Plasma membrane
- Cell inner membrane 1 Publication; Peripheral membrane protein 1 Publication; Periplasmic side 1 Publication
Note: Has been isolated in association with the inner membrane, suggesting it may be tethered to the membrane.
Plasma Membrane
- plasma membrane Source: UniProtKB-SubCell
Keywords - Cellular componenti
Cell inner membrane, Cell membrane, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 19 | Sequence analysisAdd BLAST | 19 | |
ChainiPRO_0000042627 | 20 – 502 | Protein YdgAAdd BLAST | 483 |
Proteomic databases
jPOSTi | P77804 |
PaxDbi | P77804 |
PRIDEi | P77804 |
Interactioni
Subunit structurei
Homodimer.
1 PublicationBinary interactionsi
P77804
With | #Exp. | IntAct |
---|---|---|
itself | 2 | EBI-552466,EBI-552466 |
GO - Molecular functioni
- identical protein binding Source: IntAct
Protein-protein interaction databases
BioGRIDi | 4260256, 117 interactors |
DIPi | DIP-11709N |
IntActi | P77804, 11 interactors |
STRINGi | 511145.b1614 |
Family & Domainsi
Sequence similaritiesi
To E.coli YihF and H.influenzae HI_1236.Curated
Keywords - Domaini
SignalPhylogenomic databases
eggNOGi | COG5339, Bacteria |
HOGENOMi | CLU_029683_2_0_6 |
Family and domain databases
InterProi | View protein in InterPro IPR010352, DUF945 |
Pfami | View protein in Pfam PF06097, DUF945, 1 hit |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
P77804-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MNKSLVAVGV IVALGVVWTG GAWYTGKKIE THLEDMVAQA NAQLKLTAPE
60 70 80 90 100
SNLEVSYQNY HRGVFSSQLQ LLVKPIAGKE NPWIKSGQSV IFNESVDHGP
110 120 130 140 150
FPLAQLKKLN LIPSMASIQT TLVNNEVSKP LFDMAKGETP FEINSRIGYS
160 170 180 190 200
GDSSSDISLK PLNYEQKDEK VAFSGGEFQL NADRDGKAIS LSGEAQSGRI
210 220 230 240 250
DAVNEYNQKV QLTFNNLKTD GSSTLASFGE RVGNQKLSLE KMTISVEGKE
260 270 280 290 300
LALLEGMEIS GKSDLVNDGK TINSQLDYSL NSLKVQNQDL GSGKLTLKVG
310 320 330 340 350
QIDGEAWHQF SQQYNAQTQA LLAQPEIANN PELYQEKVTE AFFSALPLML
360 370 380 390 400
KGDPVITIAP LSWKNSQGES ALNLSLFLKD PATTKEAPQT LAQEVDRSVK
410 420 430 440 450
SLDAKLTIPV DMATEFMTQV AKLEGYQEDQ AKKLAKQQVE GASAMGQMFR
460 470 480 490 500
LTTLQDNTIT TSLQYANGQI TLNGQKMSLE DFVGMFAMPA LNVPAVPAIP
Sequence cautioni
The sequence AAA68926 differs from that shown. Reason: Frameshift.Curated
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 186 – 198 | GKAIS…EAQSG → AKPSPFPGRRKVV (Ref. 1) CuratedAdd BLAST | 13 | |
Sequence conflicti | 322 – 323 | LA → SR in AAA68926 (Ref. 1) Curated | 2 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | M14641 Genomic DNA Translation: AAA68926.1 Frameshift. U00096 Genomic DNA Translation: AAC74686.1 AP009048 Genomic DNA Translation: BAA15362.1 |
PIRi | H64917 |
RefSeqi | NP_416131.1, NC_000913.3 WP_001043339.1, NZ_SSZK01000001.1 |
Genome annotation databases
EnsemblBacteriai | AAC74686; AAC74686; b1614 BAA15362; BAA15362; BAA15362 |
GeneIDi | 57731008 946172 |
KEGGi | ecj:JW1606 eco:b1614 |
PATRICi | fig|511145.12.peg.1685 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | M14641 Genomic DNA Translation: AAA68926.1 Frameshift. U00096 Genomic DNA Translation: AAC74686.1 AP009048 Genomic DNA Translation: BAA15362.1 |
PIRi | H64917 |
RefSeqi | NP_416131.1, NC_000913.3 WP_001043339.1, NZ_SSZK01000001.1 |
3D structure databases
SMRi | P77804 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 4260256, 117 interactors |
DIPi | DIP-11709N |
IntActi | P77804, 11 interactors |
STRINGi | 511145.b1614 |
Proteomic databases
jPOSTi | P77804 |
PaxDbi | P77804 |
PRIDEi | P77804 |
Genome annotation databases
EnsemblBacteriai | AAC74686; AAC74686; b1614 BAA15362; BAA15362; BAA15362 |
GeneIDi | 57731008 946172 |
KEGGi | ecj:JW1606 eco:b1614 |
PATRICi | fig|511145.12.peg.1685 |
Organism-specific databases
EchoBASEi | EB2351 |
Phylogenomic databases
eggNOGi | COG5339, Bacteria |
HOGENOMi | CLU_029683_2_0_6 |
Enzyme and pathway databases
BioCyci | EcoCyc:G6865-MONOMER |
Miscellaneous databases
PROi | PR:P77804 |
Family and domain databases
InterProi | View protein in InterPro IPR010352, DUF945 |
Pfami | View protein in Pfam PF06097, DUF945, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YDGA_ECOLI | |
Accessioni | P77804Primary (citable) accession number: P77804 Secondary accession number(s): Q47707 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1997 |
Last sequence update: | February 1, 1997 | |
Last modified: | February 10, 2021 | |
This is version 145 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |