UniProtKB - P77721 (YDJF_ECOLI)
Protein
Uncharacterized HTH-type transcriptional regulator YdjF
Gene
ydjF
Organism
Escherichia coli (strain K12)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 20 – 39 | H-T-H motifPROSITE-ProRule annotationAdd BLAST | 20 |
GO - Molecular functioni
- DNA binding Source: UniProtKB-KW
- DNA-binding transcription factor activity Source: InterPro
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Enzyme and pathway databases
BioCyci | EcoCyc:G6957-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized HTH-type transcriptional regulator YdjF |
Gene namesi | Name:ydjF Ordered Locus Names:b1770, JW1759 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000050272 | 1 – 252 | Uncharacterized HTH-type transcriptional regulator YdjFAdd BLAST | 252 |
Proteomic databases
jPOSTi | P77721 |
PaxDbi | P77721 |
PRIDEi | P77721 |
Interactioni
Binary interactionsi
P77721
With | #Exp. | IntAct |
---|---|---|
lpdA [P0A9P0] | 2 | EBI-545197,EBI-542856 |
Protein-protein interaction databases
BioGRIDi | 4261174, 9 interactors |
DIPi | DIP-11769N |
IntActi | P77721, 17 interactors |
STRINGi | 511145.b1770 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 3 – 58 | HTH deoR-typePROSITE-ProRule annotationAdd BLAST | 56 |
Phylogenomic databases
eggNOGi | COG1349, Bacteria |
HOGENOMi | CLU_060699_1_4_6 |
InParanoidi | P77721 |
PhylomeDBi | P77721 |
Family and domain databases
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR014036, DeoR_C IPR001034, DeoR_HTH IPR037171, NagB/RpiA_transferase-like IPR018356, Tscrpt_reg_HTH_DeoR_CS IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf |
Pfami | View protein in Pfam PF00455, DeoRC, 1 hit PF08220, HTH_DeoR, 1 hit |
PRINTSi | PR00037, HTHLACR |
SMARTi | View protein in SMART SM00420, HTH_DEOR, 1 hit |
SUPFAMi | SSF100950, SSF100950, 1 hit SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS00894, HTH_DEOR_1, 1 hit PS51000, HTH_DEOR_2, 1 hit |
i Sequence
Sequence statusi: Complete.
P77721-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAAKDRIQAI KQMVANDKKV TVSNLSGIFQ VTEETIRRDL EKLEDEGFLT
60 70 80 90 100
RTYGGAVLNT AMLTENIHFY KRASSFYEEK QLIARKALPF IDNKTTMAAD
110 120 130 140 150
SSSTVMELLK LLQDRSGLTL LTNSAEAIHV LAQSEIKVVS TGGELNKNTL
160 170 180 190 200
SLQGRITKEI IRRYHVDIMV MSCKGLDINS GALDSNEAEA EIKKTMIRQA
210 220 230 240 250
TEVALLVDHS KFDRKAFVQL ADFSHINYII TDKSPGAEWI AFCKDNNIQL
VW
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00096 Genomic DNA Translation: AAC74840.1 AP009048 Genomic DNA Translation: BAA15561.1 |
PIRi | B64937 |
RefSeqi | NP_416284.1, NC_000913.3 WP_000719096.1, NZ_SSZK01000001.1 |
Genome annotation databases
EnsemblBacteriai | AAC74840; AAC74840; b1770 BAA15561; BAA15561; BAA15561 |
GeneIDi | 57731165 946272 |
KEGGi | ecj:JW1759 eco:b1770 |
PATRICi | fig|1411691.4.peg.484 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00096 Genomic DNA Translation: AAC74840.1 AP009048 Genomic DNA Translation: BAA15561.1 |
PIRi | B64937 |
RefSeqi | NP_416284.1, NC_000913.3 WP_000719096.1, NZ_SSZK01000001.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 4261174, 9 interactors |
DIPi | DIP-11769N |
IntActi | P77721, 17 interactors |
STRINGi | 511145.b1770 |
Proteomic databases
jPOSTi | P77721 |
PaxDbi | P77721 |
PRIDEi | P77721 |
Genome annotation databases
EnsemblBacteriai | AAC74840; AAC74840; b1770 BAA15561; BAA15561; BAA15561 |
GeneIDi | 57731165 946272 |
KEGGi | ecj:JW1759 eco:b1770 |
PATRICi | fig|1411691.4.peg.484 |
Organism-specific databases
EchoBASEi | EB3255 |
Phylogenomic databases
eggNOGi | COG1349, Bacteria |
HOGENOMi | CLU_060699_1_4_6 |
InParanoidi | P77721 |
PhylomeDBi | P77721 |
Enzyme and pathway databases
BioCyci | EcoCyc:G6957-MONOMER |
Miscellaneous databases
PROi | PR:P77721 |
Family and domain databases
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR014036, DeoR_C IPR001034, DeoR_HTH IPR037171, NagB/RpiA_transferase-like IPR018356, Tscrpt_reg_HTH_DeoR_CS IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf |
Pfami | View protein in Pfam PF00455, DeoRC, 1 hit PF08220, HTH_DeoR, 1 hit |
PRINTSi | PR00037, HTHLACR |
SMARTi | View protein in SMART SM00420, HTH_DEOR, 1 hit |
SUPFAMi | SSF100950, SSF100950, 1 hit SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS00894, HTH_DEOR_1, 1 hit PS51000, HTH_DEOR_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YDJF_ECOLI | |
Accessioni | P77721Primary (citable) accession number: P77721 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 15, 1998 |
Last sequence update: | February 1, 1997 | |
Last modified: | February 10, 2021 | |
This is version 149 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |