UniProtKB - P77698 (YBCK_ECOLI)
Protein
Uncharacterized protein YbcK
Gene
ybcK
Organism
Escherichia coli (strain K12)
Status
Functioni
Miscellaneous
Encoded by the cryptic lambdoid prophage DLP12.
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Active sitei | 11 | O-(5'-phospho-DNA)-serine intermediatePROSITE-ProRule annotation | 1 |
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 175 – 290 | RecombinasePROSITE-ProRule annotationAdd BLAST | 116 |
GO - Molecular functioni
- DNA binding Source: UniProtKB-KW
- recombinase activity Source: GO_Central
GO - Biological processi
- DNA recombination Source: GO_Central
Keywordsi
Molecular function | DNA-binding |
Biological process | DNA recombination |
Enzyme and pathway databases
BioCyci | EcoCyc:G6300-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized protein YbcK |
Gene namesi | Name:ybcK Ordered Locus Names:b0544, JW0532 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000168651 | 1 – 508 | Uncharacterized protein YbcKAdd BLAST | 508 |
Proteomic databases
PaxDbi | P77698 |
PRIDEi | P77698 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4261008, 46 interactors |
DIPi | DIP-11332N |
IntActi | P77698, 2 interactors |
STRINGi | 511145.b0544 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 3 – 163 | Resolvase/invertase-type recombinase catalyticPROSITE-ProRule annotationAdd BLAST | 161 |
Phylogenomic databases
eggNOGi | COG1961, Bacteria |
HOGENOMi | CLU_030020_3_1_6 |
Family and domain databases
Gene3Di | 1.10.10.2600, 1 hit 3.40.50.1390, 1 hit |
InterProi | View protein in InterPro IPR038109, DNA_bind_recomb_sf IPR011109, DNA_bind_recombinase_dom IPR006119, Resolv_N IPR036162, Resolvase-like_N_sf IPR025827, Zn_ribbon_recom_dom |
Pfami | View protein in Pfam PF07508, Recombinase, 1 hit PF00239, Resolvase, 1 hit PF13408, Zn_ribbon_recom, 1 hit |
SMARTi | View protein in SMART SM00857, Resolvase, 1 hit |
SUPFAMi | SSF53041, SSF53041, 1 hit |
PROSITEi | View protein in PROSITE PS51737, RECOMBINASE_DNA_BIND, 1 hit PS51736, RECOMBINASES_3, 1 hit |
i Sequence
Sequence statusi: Complete.
P77698-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKKAIAYMRF SSPGQMSGDS LNRQRRLIAE WLKVNSDYYL DTITYEDLGL
60 70 80 90 100
SAFKGKHAQS GAFSEFLDAI EHGYILPGTT LLVESLDRLS REKVGEAIER
110 120 130 140 150
LKLILNHGID VITLCDNTVY NIDSLNEPYS LIKAILIAQR ANEESEIKSS
160 170 180 190 200
RVKLSWKKKR QDALESGTIM TASCPRWLSL DDKRTAFVPD PDRVKTIELI
210 220 230 240 250
FKLRMERRSL NAIAKYLNDH AVKNFSGKES AWGPSVIEKL LANKALIGIC
260 270 280 290 300
VPSYRARGKG ISEIAGYYPR VISDDLFYAV QEIRLAPFGI SNSSKNPMLI
310 320 330 340 350
NLLRTVMKCE ACGNTMIVHA VSGSLHGYYV CPMRRLHRCD RPSIKRDLVD
360 370 380 390 400
YNIINELLFN CSKIQPVENK KDANETLELK IIELQMKINN LIVALSVAPE
410 420 430 440 450
VTAIAEKIRL LDKELRRASV SLKTLKSKGV NSFSDFYAID LTSKNGRELC
460 470 480 490 500
RTLAYKTFEK IIINTDNKTC DIYFMNGIVF KHYPLMKVIS AQQAISALKY
MVDGEIYF
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U82598 Genomic DNA Translation: AAB40741.1 U00096 Genomic DNA Translation: AAC73645.1 AP009048 Genomic DNA Translation: BAE76319.1 |
PIRi | F64786 |
RefSeqi | NP_415076.1, NC_000913.3 WP_000709082.1, NZ_LN832404.1 |
Genome annotation databases
EnsemblBacteriai | AAC73645; AAC73645; b0544 BAE76319; BAE76319; BAE76319 |
GeneIDi | 945166 |
KEGGi | ecj:JW0532 eco:b0544 |
PATRICi | fig|1411691.4.peg.1733 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U82598 Genomic DNA Translation: AAB40741.1 U00096 Genomic DNA Translation: AAC73645.1 AP009048 Genomic DNA Translation: BAE76319.1 |
PIRi | F64786 |
RefSeqi | NP_415076.1, NC_000913.3 WP_000709082.1, NZ_LN832404.1 |
3D structure databases
SMRi | P77698 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 4261008, 46 interactors |
DIPi | DIP-11332N |
IntActi | P77698, 2 interactors |
STRINGi | 511145.b0544 |
Proteomic databases
PaxDbi | P77698 |
PRIDEi | P77698 |
Protocols and materials databases
DNASUi | 945166 |
Genome annotation databases
EnsemblBacteriai | AAC73645; AAC73645; b0544 BAE76319; BAE76319; BAE76319 |
GeneIDi | 945166 |
KEGGi | ecj:JW0532 eco:b0544 |
PATRICi | fig|1411691.4.peg.1733 |
Organism-specific databases
EchoBASEi | EB3392 |
Phylogenomic databases
eggNOGi | COG1961, Bacteria |
HOGENOMi | CLU_030020_3_1_6 |
Enzyme and pathway databases
BioCyci | EcoCyc:G6300-MONOMER |
Miscellaneous databases
PROi | PR:P77698 |
Family and domain databases
Gene3Di | 1.10.10.2600, 1 hit 3.40.50.1390, 1 hit |
InterProi | View protein in InterPro IPR038109, DNA_bind_recomb_sf IPR011109, DNA_bind_recombinase_dom IPR006119, Resolv_N IPR036162, Resolvase-like_N_sf IPR025827, Zn_ribbon_recom_dom |
Pfami | View protein in Pfam PF07508, Recombinase, 1 hit PF00239, Resolvase, 1 hit PF13408, Zn_ribbon_recom, 1 hit |
SMARTi | View protein in SMART SM00857, Resolvase, 1 hit |
SUPFAMi | SSF53041, SSF53041, 1 hit |
PROSITEi | View protein in PROSITE PS51737, RECOMBINASE_DNA_BIND, 1 hit PS51736, RECOMBINASES_3, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YBCK_ECOLI | |
Accessioni | P77698Primary (citable) accession number: P77698 Secondary accession number(s): Q2MBN7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1997 |
Last sequence update: | February 1, 1997 | |
Last modified: | October 7, 2020 | |
This is version 122 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |