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Protein

ABC transporter periplasmic-binding protein YphF

Gene

yphF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Probably part of the binding-protein-dependent transport system YphDEF.

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciEcoCyc:G7342-MONOMER

Protein family/group databases

TCDBi3.A.1.2.27 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter periplasmic-binding protein YphF
Gene namesi
Name:yphF
Ordered Locus Names:b2548, JW2532
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13467 yphF

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 261 PublicationAdd BLAST26
ChainiPRO_000003174427 – 327ABC transporter periplasmic-binding protein YphFAdd BLAST301

Proteomic databases

PaxDbiP77269
PRIDEiP77269

Interactioni

Protein-protein interaction databases

BioGridi4261316, 32 interactors
IntActiP77269, 3 interactors
STRINGi316385.ECDH10B_2715

Structurei

3D structure databases

ProteinModelPortaliP77269
SMRiP77269
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105FCA Bacteria
COG1879 LUCA
HOGENOMiHOG000078217
KOiK02058
OMAiEGPQKAQ
PhylomeDBiP77269

Family and domain databases

InterProiView protein in InterPro
IPR028082 Peripla_BP_I
IPR025997 SBP_2_dom
PfamiView protein in Pfam
PF13407 Peripla_BP_4, 1 hit
SUPFAMiSSF53822 SSF53822, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P77269-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTKMRTTRN LLLMATLLGS ALFARAAEKE MTIGAIYLDT QGYYAGVRQG
60 70 80 90 100
VQDAAKDSSV QVQLIETNAQ GDISKESTFV DTLVARNVDA IILSAVSENG
110 120 130 140 150
SSRTVRRASE AGIPVICYNT CINQKGVDKY VSAYLVGDPL EFGKKLGNAA
160 170 180 190 200
ADYFIANKID QPKIAVINCE AFEVCVQRRK GFEEVLKSRV PGAQIVANQE
210 220 230 240 250
GTVLDKAISV GEKLIISTPD LNAIMGESGG ATLGAVKAVR NQNQAGKIAV
260 270 280 290 300
FGSDMTTEIA QELENNQVLK AVVDISGKKM GNAVFAQTLK VINKQADGEK
310 320
VIQVPIDLYT KTEDGKQWLA THVDGLP
Length:327
Mass (Da):35,058
Last modified:February 1, 1997 - v1
Checksum:i3182BC4494FFC766
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC75601.1
AP009048 Genomic DNA Translation: BAA16457.1
PIRiC65032
RefSeqiNP_417043.1, NC_000913.3
WP_001142427.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75601; AAC75601; b2548
BAA16457; BAA16457; BAA16457
GeneIDi947020
KEGGiecj:JW2532
eco:b2548
PATRICifig|1411691.4.peg.4186

Similar proteinsi

Entry informationi

Entry nameiYPHF_ECOLI
AccessioniPrimary (citable) accession number: P77269
Secondary accession number(s): P76994
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 118 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

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