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Protein

Sel1-repeat-containing protein YbeQ

Gene

ybeQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

  • response to oxidative stress Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:G6351-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Sel1-repeat-containing protein YbeQ
Gene namesi
Name:ybeQ
Ordered Locus Names:b0644, JW5091
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13647 ybeQ

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001686811 – 325Sel1-repeat-containing protein YbeQAdd BLAST325

Proteomic databases

PaxDbiP77234
PRIDEiP77234

Interactioni

Protein-protein interaction databases

BioGridi4261862, 12 interactors
IntActiP77234, 6 interactors
STRINGi316385.ECDH10B_0713

Structurei

3D structure databases

ProteinModelPortaliP77234
SMRiP77234
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati26 – 61Sel1-like 1CuratedAdd BLAST36
Repeati63 – 97Sel1-like 2CuratedAdd BLAST35
Repeati103 – 130Sel1-like 3CuratedAdd BLAST28
Repeati132 – 167Sel1-like 4CuratedAdd BLAST36
Repeati168 – 203Sel1-like 5CuratedAdd BLAST36
Repeati205 – 239Sel1-like 6CuratedAdd BLAST35
Repeati242 – 275Sel1-like 7CuratedAdd BLAST34
Repeati280 – 305Sel1-like 8CuratedAdd BLAST26

Sequence similaritiesi

To E.coli YbeT.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4105EUU Bacteria
COG0790 LUCA
HOGENOMiHOG000003584
InParanoidiP77234
KOiK07126
OMAiYGAYQRG
PhylomeDBiP77234

Family and domain databases

Gene3Di1.25.40.10, 2 hits
InterProiView protein in InterPro
IPR006597 Sel1-like
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF08238 Sel1, 8 hits
SMARTiView protein in SMART
SM00671 SEL1, 8 hits

Sequencei

Sequence statusi: Complete.

P77234-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIFTSSCCDN LSIDEIIERA EKGDCEAQYI VGFYYNRDSA IDSPDDEKAF
60 70 80 90 100
YWLKLAAEQG HCEAQYSLGQ KYTEDKSRHK DNEQAIFWLK KAALQGHTFA
110 120 130 140 150
SNALGWTLDR GEAPNYKEAV VWYQIAAESG MSYAQNNLGW MYRNGNGVAK
160 170 180 190 200
DYALAFFWYK QAALQGHSDA QNNLADLYED GKGVAQNKTL AAFWYLKSAQ
210 220 230 240 250
QGNRHAQFQI AWDYNAGEGV DQDYKQAMYW YLKAAAQGSV GAYVNIGYMY
260 270 280 290 300
KHGQGVEKDY QAAFEWFTKA AECNDATAWY NLAIMYHYGE GRPVDLRQAL
310 320
DLYRKVQSSG TRDVSQEIRE TEDLL
Length:325
Mass (Da):37,031
Last modified:September 26, 2001 - v2
Checksum:i825BEB1884B2B92E
GO

Sequence cautioni

The sequence AAB40845 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82598 Genomic DNA Translation: AAB40845.1 Different initiation.
U00096 Genomic DNA Translation: AAC73745.2
AP009048 Genomic DNA Translation: BAA35291.2
PIRiB64799
RefSeqiNP_415177.4, NC_000913.3
WP_000578178.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73745; AAC73745; b0644
BAA35291; BAA35291; BAA35291
GeneIDi945251
KEGGiecj:JW5091
eco:b0644
PATRICifig|511145.12.peg.675

Similar proteinsi

Entry informationi

Entry nameiYBEQ_ECOLI
AccessioniPrimary (citable) accession number: P77234
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: September 26, 2001
Last modified: March 28, 2018
This is version 113 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

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