UniProtKB - P75828 (YBJD_ECOLI)
Protein
Uncharacterized protein YbjD
Gene
ybjD
Organism
Escherichia coli (strain K12)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Nucleotide bindingi | 29 – 36 | ATPSequence analysis | 8 |
GO - Molecular functioni
- ATP binding Source: UniProtKB-KW
GO - Biological processi
- DNA synthesis involved in DNA repair Source: GO_Central
- double-strand break repair Source: GO_Central
Keywordsi
Ligand | ATP-binding, Nucleotide-binding |
Enzyme and pathway databases
BioCyci | EcoCyc:G6459-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized protein YbjD |
Gene namesi | Name:ybjD Ordered Locus Names:b0876, JW0860 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000168736 | 1 – 552 | Uncharacterized protein YbjDAdd BLAST | 552 |
Proteomic databases
jPOSTi | P75828 |
PaxDbi | P75828 |
PRIDEi | P75828 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4260001, 56 interactors |
DIPi | DIP-11446N |
IntActi | P75828, 6 interactors |
STRINGi | 511145.b0876 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 379 – 469 | ToprimPROSITE-ProRule annotationAdd BLAST | 91 |
Phylogenomic databases
eggNOGi | COG3593, Bacteria |
HOGENOMi | CLU_034845_0_0_6 |
InParanoidi | P75828 |
Family and domain databases
CDDi | cd01026, TOPRIM_OLD, 1 hit |
InterProi | View protein in InterPro IPR022602, DUF2813 IPR027417, P-loop_NTPase IPR006171, TOPRIM_domain IPR034139, TOPRIM_OLD |
Pfami | View protein in Pfam PF11398, DUF2813, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
PROSITEi | View protein in PROSITE PS50880, TOPRIM, 1 hit |
i Sequence
Sequence statusi: Complete.
P75828-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MILERVEIVG FRGINRLSLM LEQNNVLIGE NAWGKSSLLD ALTLLLSPES
60 70 80 90 100
DLYHFERDDF WFPPGDINGR EHHLHIILTF RESLPGRHRV RRYRPLEACW
110 120 130 140 150
TPCTDGYHRI FYRLEGESAE DGSVMTLRSF LDKDGHPIDV EDINDQARHL
160 170 180 190 200
VRLMPVLRLR DARFMRRIRN GTVPNVPNVE VTARQLDFLA RELSSHPQNL
210 220 230 240 250
SDGQIRQGLS AMVQLLEHYF SEQGAGQARY RLMRRRASNE QRSWRYLDII
260 270 280 290 300
NRMIDRPGGR SYRVILLGLF ATLLQAKGTL RLDKDARPLL LIEDPETRLH
310 320 330 340 350
PIMLSVAWHL LNLLPLQRIA TTNSGELLSL TPVEHVCRLV RESSRVAAWR
360 370 380 390 400
LGPSGLSTED SRRISFHIRF NRPSSLFARC WLLVEGETET WVINELARQC
410 420 430 440 450
GHHFDAEGIK VIEFAQSGLK PLVKFARRMG IEWHVLVDGD EAGKKYAATV
460 470 480 490 500
RSLLNNDREA EREHLTALPA LDMEHFMYRQ GFSDVFHRMA QIPENVPMNL
510 520 530 540 550
RKIISKAIHR SSKPDLAIEV AMEAGRRGVD SVPTLLKKMF SRVLWLARGR
AD
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00096 Genomic DNA Translation: AAC73963.1 AP009048 Genomic DNA Translation: BAA35594.1 |
PIRi | D64826 |
RefSeqi | NP_415397.1, NC_000913.3 WP_000599802.1, NZ_LN832404.1 |
Genome annotation databases
EnsemblBacteriai | AAC73963; AAC73963; b0876 BAA35594; BAA35594; BAA35594 |
GeneIDi | 945498 |
KEGGi | ecj:JW0860 eco:b0876 |
PATRICi | fig|511145.12.peg.905 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00096 Genomic DNA Translation: AAC73963.1 AP009048 Genomic DNA Translation: BAA35594.1 |
PIRi | D64826 |
RefSeqi | NP_415397.1, NC_000913.3 WP_000599802.1, NZ_LN832404.1 |
3D structure databases
SMRi | P75828 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 4260001, 56 interactors |
DIPi | DIP-11446N |
IntActi | P75828, 6 interactors |
STRINGi | 511145.b0876 |
Proteomic databases
jPOSTi | P75828 |
PaxDbi | P75828 |
PRIDEi | P75828 |
Genome annotation databases
EnsemblBacteriai | AAC73963; AAC73963; b0876 BAA35594; BAA35594; BAA35594 |
GeneIDi | 945498 |
KEGGi | ecj:JW0860 eco:b0876 |
PATRICi | fig|511145.12.peg.905 |
Organism-specific databases
EchoBASEi | EB3199 |
Phylogenomic databases
eggNOGi | COG3593, Bacteria |
HOGENOMi | CLU_034845_0_0_6 |
InParanoidi | P75828 |
Enzyme and pathway databases
BioCyci | EcoCyc:G6459-MONOMER |
Miscellaneous databases
PROi | PR:P75828 |
Family and domain databases
CDDi | cd01026, TOPRIM_OLD, 1 hit |
InterProi | View protein in InterPro IPR022602, DUF2813 IPR027417, P-loop_NTPase IPR006171, TOPRIM_domain IPR034139, TOPRIM_OLD |
Pfami | View protein in Pfam PF11398, DUF2813, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
PROSITEi | View protein in PROSITE PS50880, TOPRIM, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YBJD_ECOLI | |
Accessioni | P75828Primary (citable) accession number: P75828 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 15, 1998 |
Last sequence update: | February 1, 1997 | |
Last modified: | December 2, 2020 | |
This is version 127 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |