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Protein

Putative regulator AbrB

Gene

abrB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Seems to be involved in the regulation of AidB.

GO - Biological processi

Enzyme and pathway databases

BioCyciEcoCyc:G6384-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative regulator AbrB
Alternative name(s):
AidB regulator
Gene namesi
Name:abrB
Synonyms:ybgN
Ordered Locus Names:b0715, JW5097
ORF Names:ECK0704
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13310 abrB

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 40HelicalSequence analysisAdd BLAST21
Transmembranei59 – 79HelicalSequence analysisAdd BLAST21
Transmembranei83 – 103HelicalSequence analysisAdd BLAST21
Transmembranei138 – 158HelicalSequence analysisAdd BLAST21
Transmembranei173 – 193HelicalSequence analysisAdd BLAST21
Transmembranei196 – 216HelicalSequence analysisAdd BLAST21
Transmembranei221 – 241HelicalSequence analysisAdd BLAST21
Transmembranei259 – 279HelicalSequence analysisAdd BLAST21
Transmembranei288 – 308HelicalSequence analysisAdd BLAST21
Transmembranei315 – 335HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000644321 – 348Putative regulator AbrBAdd BLAST348

Proteomic databases

PaxDbiP75747
PRIDEiP75747

Interactioni

Protein-protein interaction databases

BioGridi4259923, 2 interactors
STRINGi316385.ECDH10B_0782

Structurei

3D structure databases

ProteinModelPortaliP75747
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the AbrB family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108KK1 Bacteria
COG3180 LUCA
HOGENOMiHOG000076013
InParanoidiP75747
KOiK07120
OMAiLLGPMIV
PhylomeDBiP75747

Family and domain databases

InterProiView protein in InterPro
IPR017516 AbrB_dup
IPR007820 AbrB_fam
PANTHERiPTHR38457 PTHR38457, 1 hit
PfamiView protein in Pfam
PF05145 AbrB, 1 hit
PIRSFiPIRSF038991 Protein_AbrB, 1 hit
TIGRFAMsiTIGR03082 Gneg_AbrB_dup, 2 hits

Sequencei

Sequence statusi: Complete.

P75747-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPVLQWGMLC VLSLLLSIGF LAVHLPAALL LGPMIAGIIF SMRGITLQLP
60 70 80 90 100
RSAFLAAQAI LGCMIAQNLT GSILTTLAVN WPIVLAILLV TLLSSAIVGW
110 120 130 140 150
LLVRYSSLPG NTGAWGSSPG GAAAMVAMAQ DYGADIRLVA FMQYLRVLFV
160 170 180 190 200
AGAAVLVTRM MLGDNAEAVN QHIVWFPPVS INLLLTILLA VVAGTVGCLL
210 220 230 240 250
RLPSGTMLIP MLAGAVLQSG QLITIELPEW LLAMAYMAIG WRIGLGFDKQ
260 270 280 290 300
ILLRALRPLP QILLSIFALL AICAGMAWGL TRFMHIDFMT AYLATSPGGL
310 320 330 340
DTVAVIAAGS NADMALIMAM QTLRLFSILL TGPAIARFIS TYAPKRSA
Length:348
Mass (Da):36,884
Last modified:December 1, 2000 - v2
Checksum:i9A667EA6321B0B8A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC73809.2
AP009048 Genomic DNA Translation: BAA35379.2
PIRiB64807
RefSeqiNP_415243.4, NC_000913.3
WP_001336221.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73809; AAC73809; b0715
BAA35379; BAA35379; BAA35379
GeneIDi945321
KEGGiecj:JW5097
eco:b0715
PATRICifig|1411691.4.peg.1558

Similar proteinsi

Entry informationi

Entry nameiABRB_ECOLI
AccessioniPrimary (citable) accession number: P75747
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: December 1, 2000
Last modified: March 28, 2018
This is version 119 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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