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Protein
Submitted name:

Lost on transformation

Gene

Plagl1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Lost on transformationImported
Submitted name:
PLAG1-like zinc finger 1Imported
Gene namesi
Name:Plagl1Imported
Synonyms:Lot1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi3014 Plagl1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiP70616

Expressioni

Gene expression databases

BgeeiENSRNOG00000025587 Expressed in 9 organ(s), highest expression level in adult mammalian kidney

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000030918

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 31C2H2-typeInterPro annotationAdd BLAST28
Domaini32 – 61C2H2-typeInterPro annotationAdd BLAST30
Domaini62 – 89C2H2-typeInterPro annotationAdd BLAST28
Domaini91 – 118C2H2-typeInterPro annotationAdd BLAST28
Domaini156 – 183C2H2-typeInterPro annotationAdd BLAST28
Domaini184 – 212C2H2-typeInterPro annotationAdd BLAST29

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili494 – 539Sequence analysisAdd BLAST46

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00390000013640
HOGENOMiHOG000294191
HOVERGENiHBG053608
KOiK19485
OMAiHRLSCLG
OrthoDBiEOG091G061O
TreeFamiTF332024

Family and domain databases

InterProiView protein in InterPro
IPR027770 PLAGL1
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR45218 PTHR45218, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 7 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 7 hits
PS50157 ZINC_FINGER_C2H2_2, 6 hits

Sequencei

Sequence statusi: Complete.

P70616-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAPFRCQKCG KSFLTLEKFT IHNYSHTRER PFKCSKTECG KAFVSKYKLM
60 70 80 90 100
RHMATHSPQK THQCTHCEKT FNRKDHLKNH LQTHDPNKMI YACEDCGKKY
110 120 130 140 150
HTMLGYKRHM ALHSASSGDL TCGVCTLELG STEVLLDHLK SHAEEKAHHA
160 170 180 190 200
PREKKHQCDH CERCFYTRKD VRRHLVVHTG CKDFLCQFCA QRFGRKDHLT
210 220 230 240 250
RHTKKTHSQE LMQESLQAGE YQGGYQPIAP PFQIKADPMP PFQLEMPPES
260 270 280 290 300
GLDGGLPPEI HGLVLASPEE VPQPMLSMPP MQPMPEQPFT LHPGVVPSSP
310 320 330 340 350
PPIILQEHKY SPVPTSFAPF VSMPMKADLK GFCNMGLFEE FPLQECQSPV
360 370 380 390 400
KFSQCFEMAK EGFGKVTLPK ELLVDAVNIA IPGSLEISSL LGFWQLPPPP
410 420 430 440 450
PQNGFMNGTI PVGAGEPLPH RITCLAQQQP PPLLPPPPPL PLPEPLPQPQ
460 470 480 490 500
LPPQFQLQLQ PQPQMQPQMQ LQPLQLQLPQ LLPQLQPEPE PEPEPEEEEE
510 520 530 540 550
EEEEIEEEEE IEEEEEAEPE AEEEEEAEDE EEAEEEEEEP QPEEAQIAMS
560 570 580
AVNMGQPPLP PTPHVFTAGT NTAILPHFHH AFR
Length:583
Mass (Da):65,960
Last modified:February 1, 1997 - v1
Checksum:i8501071AADFB3F4B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07000258 Genomic DNA No translation available.
U72620 mRNA Translation: AAB67042.1
RefSeqiNP_036892.1, NM_012760.3
UniGeneiRn.6977

Genome annotation databases

EnsembliENSRNOT00000030329; ENSRNOP00000030918; ENSRNOG00000025587
GeneIDi25157
KEGGirno:25157
UCSCiRGD:3014 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07000258 Genomic DNA No translation available.
U72620 mRNA Translation: AAB67042.1
RefSeqiNP_036892.1, NM_012760.3
UniGeneiRn.6977

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000030918

Proteomic databases

PRIDEiP70616

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000030329; ENSRNOP00000030918; ENSRNOG00000025587
GeneIDi25157
KEGGirno:25157
UCSCiRGD:3014 rat

Organism-specific databases

CTDi5325
RGDi3014 Plagl1

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00390000013640
HOGENOMiHOG000294191
HOVERGENiHBG053608
KOiK19485
OMAiHRLSCLG
OrthoDBiEOG091G061O
TreeFamiTF332024

Gene expression databases

BgeeiENSRNOG00000025587 Expressed in 9 organ(s), highest expression level in adult mammalian kidney

Family and domain databases

InterProiView protein in InterPro
IPR027770 PLAGL1
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR45218 PTHR45218, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 7 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 7 hits
PS50157 ZINC_FINGER_C2H2_2, 6 hits
ProtoNetiSearch...

Entry informationi

Entry nameiP70616_RAT
AccessioniPrimary (citable) accession number: P70616
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: November 7, 2018
This is version 129 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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