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Protein

Endoribonuclease YbeY

Gene

ybeY

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.UniRule annotation

Cofactori

Zn2+UniRule annotationNote: Binds 1 zinc ion.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi122Zinc; catalyticUniRule annotation1
Metal bindingi126Zinc; catalyticUniRule annotation1
Metal bindingi132Zinc; catalyticUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionEndonuclease, Hydrolase, Nuclease
Biological processRibosome biogenesis, rRNA processing
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Endoribonuclease YbeYUniRule annotation (EC:3.1.-.-UniRule annotation)
Gene namesi
Name:ybeYUniRule annotation
Ordered Locus Names:BMEI1974
OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Taxonomic identifieri224914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
Proteomesi
  • UP000000419 Componenti: Chromosome I

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001024231 – 168Endoribonuclease YbeYAdd BLAST168

Interactioni

Protein-protein interaction databases

STRINGi224914.BAWG_0271

Structurei

3D structure databases

ProteinModelPortaliP67132
SMRiP67132
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the endoribonuclease YbeY family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105KGE Bacteria
COG0319 LUCA
HOGENOMiHOG000132869
KOiK07042
OMAiLGYDHMN

Family and domain databases

Gene3Di3.40.390.30, 1 hit
HAMAPiMF_00009 Endoribonucl_YbeY, 1 hit
InterProiView protein in InterPro
IPR023091 MetalPrtase_cat_dom_sf_prd
IPR002036 YbeY
IPR020549 YbeY_CS
PfamiView protein in Pfam
PF02130 UPF0054, 1 hit
TIGRFAMsiTIGR00043 TIGR00043, 1 hit
PROSITEiView protein in PROSITE
PS01306 UPF0054, 1 hit

Sequencei

Sequence statusi: Complete.

P67132-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDNAIHIDI MIEAGNWPDE ASLESLVSKS VAAAWNNLGL KSATSELSVV
60 70 80 90 100
FTDDASIQLL NGEWRGKDKP TNVLSFPAFP VKAGSQPGPM LGDIVIARET
110 120 130 140 150
VEREAKEEGK PIENHLSHLV VHGFLHLLGY DHETDEEAEV MEAREREILH
160
ALAIPDPYAV SDEDINND
Length:168
Mass (Da):18,423
Last modified:October 11, 2004 - v1
Checksum:iBC6B2B7F0F074795
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008917 Genomic DNA Translation: AAL53155.1
PIRiAH3498

Genome annotation databases

EnsemblBacteriaiAAL53155; AAL53155; BMEI1974
KEGGibme:BMEI1974

Similar proteinsi

Entry informationi

Entry nameiYBEY_BRUME
AccessioniPrimary (citable) accession number: P67132
Secondary accession number(s): Q8FXU1, Q8YEA4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: October 11, 2004
Last modified: November 22, 2017
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella melitensis
    Brucella melitensis (strain 16M): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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