UniProtKB - P64581 (YQJD_ECOLI)
Protein
Uncharacterized protein YqjD
Gene
yqjD
Organism
Escherichia coli (strain K12)
Status
Functioni
Upon overexpression inhibits growth.
GO - Molecular functioni
- ribosomal small subunit binding Source: EcoCyc
- ribosome binding Source: InterPro
Enzyme and pathway databases
BioCyci | EcoCyc:G7612-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized protein YqjD |
Gene namesi | Name:yqjD Ordered Locus Names:b3098, JW3069 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
Subcellular locationi
- Cell inner membrane 2 Publications; Single-pass membrane protein 2 Publications Note: Predominantly localized to 1 cell pole in stationary phase, with a few smaller foci elsewhere in the cell; polar localization depends on the minCDE operon.
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 81 – 98 | HelicalSequence analysisAdd BLAST | 18 |
GO - Cellular componenti
- cell pole Source: EcoCyc
- integral component of membrane Source: UniProtKB-KW
- plasma membrane Source: EcoCyc
Keywords - Cellular componenti
Cell inner membrane, Cell membrane, MembranePathology & Biotechi
Disruption phenotypei
Not essential (in strain K12 / BW25113).1 Publication
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000169428 | 1 – 101 | Uncharacterized protein YqjDAdd BLAST | 101 |
Proteomic databases
jPOSTi | P64581 |
PaxDbi | P64581 |
PRIDEi | P64581 |
Expressioni
Inductioni
Maximally expressed after 2 days growth, i.e. during stationary phase (at protein level). Expression is regulated by RpoS.1 Publication
Interactioni
Subunit structurei
Binds to 70S and 100S ribosomes, probably via the 30S subunit.
Protein-protein interaction databases
BioGRIDi | 4259439, 31 interactors |
DIPi | DIP-47920N |
IntActi | P64581, 1 interactor |
STRINGi | 511145.b3098 |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 12 | Required for binding to 30S subunits in vitroAdd BLAST | 12 |
Sequence similaritiesi
Belongs to the ElaB/YgaM/YqjD family.Curated
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | COG4575, Bacteria |
HOGENOMi | CLU_132623_4_2_6 |
InParanoidi | P64581 |
Family and domain databases
InterProi | View protein in InterPro IPR043605, DUF883_C IPR043604, DUF883_N IPR010279, YqjD/ElaB |
PANTHERi | PTHR35893, PTHR35893, 1 hit |
Pfami | View protein in Pfam PF05957, DUF883, 1 hit PF19029, DUF883_C, 1 hit |
i Sequence
Sequence statusi: Complete.
P64581-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSKEHTTEHL RAELKSLSDT LEEVLSSSGE KSKEELSKIR SKAEQALKQS
60 70 80 90 100
RYRLGETGDA IAKQTRVAAA RADEYVRENP WTGVGIGAAI GVVLGVLLSR
R
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U18997 Genomic DNA Translation: AAA57902.1 U00096 Genomic DNA Translation: AAC76133.1 AP009048 Genomic DNA Translation: BAE77148.1 |
PIRi | G65098 |
RefSeqi | NP_417569.1, NC_000913.3 WP_000031415.1, NZ_STEB01000001.1 |
Genome annotation databases
EnsemblBacteriai | AAC76133; AAC76133; b3098 BAE77148; BAE77148; BAE77148 |
GeneIDi | 49582931 947614 |
KEGGi | ecj:JW3069 eco:b3098 |
PATRICi | fig|511145.12.peg.3194 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U18997 Genomic DNA Translation: AAA57902.1 U00096 Genomic DNA Translation: AAC76133.1 AP009048 Genomic DNA Translation: BAE77148.1 |
PIRi | G65098 |
RefSeqi | NP_417569.1, NC_000913.3 WP_000031415.1, NZ_STEB01000001.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 4259439, 31 interactors |
DIPi | DIP-47920N |
IntActi | P64581, 1 interactor |
STRINGi | 511145.b3098 |
Proteomic databases
jPOSTi | P64581 |
PaxDbi | P64581 |
PRIDEi | P64581 |
Genome annotation databases
EnsemblBacteriai | AAC76133; AAC76133; b3098 BAE77148; BAE77148; BAE77148 |
GeneIDi | 49582931 947614 |
KEGGi | ecj:JW3069 eco:b3098 |
PATRICi | fig|511145.12.peg.3194 |
Organism-specific databases
EchoBASEi | EB2599 |
Phylogenomic databases
eggNOGi | COG4575, Bacteria |
HOGENOMi | CLU_132623_4_2_6 |
InParanoidi | P64581 |
Enzyme and pathway databases
BioCyci | EcoCyc:G7612-MONOMER |
Miscellaneous databases
PROi | PR:P64581 |
Family and domain databases
InterProi | View protein in InterPro IPR043605, DUF883_C IPR043604, DUF883_N IPR010279, YqjD/ElaB |
PANTHERi | PTHR35893, PTHR35893, 1 hit |
Pfami | View protein in Pfam PF05957, DUF883, 1 hit PF19029, DUF883_C, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YQJD_ECOLI | |
Accessioni | P64581Primary (citable) accession number: P64581 Secondary accession number(s): P42617, Q2M9A8 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | October 11, 2004 |
Last sequence update: | October 11, 2004 | |
Last modified: | October 7, 2020 | |
This is version 105 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families