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UniProtKB - P62857 (RS28_HUMAN)

Entry version 149 (13 Feb 2019)
Sequence version 1 (16 Aug 2004)
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Protein

40S ribosomal protein S28

Gene

RPS28

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • RNA binding Source: UniProtKB
  • structural constituent of ribosome Source: GO_Central
View the complete GO annotation on QuickGO ...

GO - Biological processi

View the complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-HSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-HSA-156902 Peptide chain elongation
R-HSA-1799339 SRP-dependent cotranslational protein targeting to membrane
R-HSA-192823 Viral mRNA Translation
R-HSA-2408557 Selenocysteine synthesis
R-HSA-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-HSA-72649 Translation initiation complex formation
R-HSA-72689 Formation of a pool of free 40S subunits
R-HSA-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-HSA-72702 Ribosomal scanning and start codon recognition
R-HSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-HSA-72764 Eukaryotic Translation Termination
R-HSA-9010553 Regulation of expression of SLITs and ROBOs
R-HSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-HSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
40S ribosomal protein S28
Alternative name(s):
Small ribosomal subunit protein eS281 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:RPS28
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 19

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...EuPathDBi		HostDB:ENSG00000233927.4

Human Gene Nomenclature Database

More...HGNCi		HGNC:10418 RPS28

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		603685 gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_P62857

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Endoplasmic reticulum

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section provides information on the disease(s) associated with genetic variations in a given protein. The information is extracted from the scientific literature and diseases that are also described in the <a href="http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim">OMIM</a> database are represented with a <a href="http://www.uniprot.org/diseases">controlled vocabulary</a> in the following way:<p><a href='/help/involvement_in_disease' target='_top'>More...</a></p>Involvement in diseasei

Diamond-Blackfan anemia 15, with mandibulofacial dysostosis (DBA15)1 Publication
The disease is caused by mutations affecting the gene represented in this entry.
Disease descriptionA form of Diamond-Blackfan anemia, a congenital non-regenerative hypoplastic anemia that usually presents early in infancy. Diamond-Blackfan anemia is characterized by a moderate to severe macrocytic anemia, erythroblastopenia, and an increased risk of malignancy. 30 to 40% of Diamond-Blackfan anemia patients present with short stature and congenital anomalies, the most frequent being craniofacial (Pierre-Robin syndrome and cleft palate), thumb and urogenital anomalies.
See also OMIM:606164

Keywords - Diseasei

Diamond-Blackfan anemia

Organism-specific databases

DisGeNET

More...DisGeNETi		6234

GeneReviews a resource of expert-authored, peer-reviewed disease descriptions.

More...GeneReviewsi		RPS28

MalaCards human disease database

More...MalaCardsi		RPS28
MIMi606164 phenotype

Open Targets

More...OpenTargetsi		ENSG00000233927

Orphanet; a database dedicated to information on rare diseases and orphan drugs

More...Orphaneti		124 Blackfan-Diamond anemia

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA34825

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		RPS28

Domain mapping of disease mutations (DMDM)

More...DMDMi		51338652

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001368221 – 6940S ribosomal protein S28Add BLAST69

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1N-acetylmethionineBy similarity1
Modified residuei41PhosphoserineCombined sources1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		P62857

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		P62857

MaxQB - The MaxQuant DataBase

More...MaxQBi		P62857

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		P62857

PeptideAtlas

More...PeptideAtlasi		P62857

PRoteomics IDEntifications database

More...PRIDEi		P62857

ProteomicsDB human proteome resource

More...ProteomicsDBi		57439

Consortium for Top Down Proteomics

More...TopDownProteomicsi		P62857

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		P62857

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		P62857

SwissPalm database of S-palmitoylation events

More...SwissPalmi		P62857

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000233927 Expressed in 201 organ(s), highest expression level in lower esophagus mucosa

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		P62857 HS

Organism-specific databases

Human Protein Atlas

More...HPAi		HPA047132

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the 40S small ribosomal subunit.3 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		112148, 135 interactors

CORUM comprehensive resource of mammalian protein complexes

More...CORUMi		P62857

Protein interaction database and analysis system

More...IntActi		P62857, 29 interactors

Molecular INTeraction database

More...MINTi		P62857

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000472469

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4UG0electron microscopy-Sc1-69[»]
4V6Xelectron microscopy5.00Ac1-69[»]
5A2Qelectron microscopy3.90c8-68[»]
5AJ0electron microscopy3.50Bc1-69[»]
5FLXelectron microscopy3.90c1-69[»]
5LKSelectron microscopy3.60Sc1-69[»]
5OA3electron microscopy4.30c8-68[»]
5T2Celectron microscopy3.60AF1-69[»]
5VYCX-ray6.00c1/c2/c3/c4/c5/c61-69[»]
6EK0electron microscopy2.90Sc1-69[»]
6FECelectron microscopy6.30l5-68[»]
6G18electron microscopy3.60c1-69[»]
6G4Selectron microscopy4.00c1-69[»]
6G4Welectron microscopy4.50c1-69[»]
6G51electron microscopy4.10c1-69[»]
6G53electron microscopy4.50c1-69[»]
6G5Helectron microscopy3.60c1-69[»]
6G5Ielectron microscopy3.50c1-69[»]

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...ProteinModelPortali		P62857

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		P62857

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS28 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG3502 Eukaryota
COG2053 LUCA

Ensembl GeneTree

More...GeneTreei		ENSGT00910000144227

The HOVERGEN Database of Homologous Vertebrate Genes

More...HOVERGENi		HBG000219

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		P62857

KEGG Orthology (KO)

More...KOi		K02979

Identification of Orthologs from Complete Genome Data

More...OMAi		MHGEASQ

Database of Orthologous Groups

More...OrthoDBi		664798at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		P62857

TreeFam database of animal gene trees

More...TreeFami		TF300136

Family and domain databases

Conserved Domains Database

More...CDDi		cd04457 S1_S28E, 1 hit

HAMAP database of protein families

More...HAMAPi		MF_00292 Ribosomal_S28e, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000289 Ribosomal_S28e
IPR028626 Ribosomal_S28e_CS

The PANTHER Classification System

More...PANTHERi		PTHR10769 PTHR10769, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF01200 Ribosomal_S28e, 1 hit

ProDom; a protein domain database

More...ProDomi		View protein in ProDom or Entries sharing at least one domain
PD005541 Ribosomal_S28e, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF50249 SSF50249, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS00961 RIBOSOMAL_S28E, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

P62857-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDTSRVQPIK LARVTKVLGR TGSQGQCTQV RVEFMDDTSR SIIRNVKGPV 
        60 
REGDVLTLLE SEREARRLR
Length:69
Mass (Da):7,841
Last modified:August 16, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i49902FE9376EB74F
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti66R → P AA sequence (PubMed:8706699).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
L05091 mRNA Translation: AAC15855.1
U58682 mRNA Translation: AAB07066.1
AB061846 Genomic DNA Translation: BAB79484.1
CR457055 mRNA Translation: CAG33336.1
BC000354 mRNA Translation: AAH00354.1
BC021239 mRNA Translation: AAH21239.1
BC070217 mRNA Translation: AAH70217.1
BC070218 mRNA Translation: AAH70218.1
AB007164 Genomic DNA Translation: BAA28594.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS45953.1

Protein sequence database of the Protein Information Resource

More...PIRi		S68914

NCBI Reference Sequences

More...RefSeqi		NP_001022.1, NM_001031.4

UniGene gene-oriented nucleotide sequence clusters

More...UniGenei		Hs.153177
Hs.322473

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000600659; ENSP00000472469; ENSG00000233927

Database of genes from NCBI RefSeq genomes

More...GeneIDi		6234

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:6234

UCSC genome browser

More...UCSCi		uc002mjn.4 human

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L05091 mRNA Translation: AAC15855.1
U58682 mRNA Translation: AAB07066.1
AB061846 Genomic DNA Translation: BAB79484.1
CR457055 mRNA Translation: CAG33336.1
BC000354 mRNA Translation: AAH00354.1
BC021239 mRNA Translation: AAH21239.1
BC070217 mRNA Translation: AAH70217.1
BC070218 mRNA Translation: AAH70218.1
AB007164 Genomic DNA Translation: BAA28594.1
CCDSiCCDS45953.1
PIRiS68914
RefSeqiNP_001022.1, NM_001031.4
UniGeneiHs.153177
Hs.322473

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4UG0electron microscopy-Sc1-69[»]
4V6Xelectron microscopy5.00Ac1-69[»]
5A2Qelectron microscopy3.90c8-68[»]
5AJ0electron microscopy3.50Bc1-69[»]
5FLXelectron microscopy3.90c1-69[»]
5LKSelectron microscopy3.60Sc1-69[»]
5OA3electron microscopy4.30c8-68[»]
5T2Celectron microscopy3.60AF1-69[»]
5VYCX-ray6.00c1/c2/c3/c4/c5/c61-69[»]
6EK0electron microscopy2.90Sc1-69[»]
6FECelectron microscopy6.30l5-68[»]
6G18electron microscopy3.60c1-69[»]
6G4Selectron microscopy4.00c1-69[»]
6G4Welectron microscopy4.50c1-69[»]
6G51electron microscopy4.10c1-69[»]
6G53electron microscopy4.50c1-69[»]
6G5Helectron microscopy3.60c1-69[»]
6G5Ielectron microscopy3.50c1-69[»]
ProteinModelPortaliP62857
SMRiP62857
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi112148, 135 interactors
CORUMiP62857
IntActiP62857, 29 interactors
MINTiP62857
STRINGi9606.ENSP00000472469

PTM databases

iPTMnetiP62857
PhosphoSitePlusiP62857
SwissPalmiP62857

Polymorphism and mutation databases

BioMutaiRPS28
DMDMi51338652

Proteomic databases

EPDiP62857
jPOSTiP62857
MaxQBiP62857
PaxDbiP62857
PeptideAtlasiP62857
PRIDEiP62857
ProteomicsDBi57439
TopDownProteomicsiP62857

Protocols and materials databases

The DNASU plasmid repository

More...DNASUi		6234
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000600659; ENSP00000472469; ENSG00000233927
GeneIDi6234
KEGGihsa:6234
UCSCiuc002mjn.4 human

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		6234
DisGeNETi6234
EuPathDBiHostDB:ENSG00000233927.4

GeneCards: human genes, protein and diseases

More...GeneCardsi		RPS28
GeneReviewsiRPS28
HGNCiHGNC:10418 RPS28
HPAiHPA047132
MalaCardsiRPS28
MIMi603685 gene
606164 phenotype
neXtProtiNX_P62857
OpenTargetsiENSG00000233927
Orphaneti124 Blackfan-Diamond anemia
PharmGKBiPA34825

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiKOG3502 Eukaryota
COG2053 LUCA
GeneTreeiENSGT00910000144227
HOVERGENiHBG000219
InParanoidiP62857
KOiK02979
OMAiMHGEASQ
OrthoDBi664798at2759
PhylomeDBiP62857
TreeFamiTF300136

Enzyme and pathway databases

ReactomeiR-HSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-HSA-156902 Peptide chain elongation
R-HSA-1799339 SRP-dependent cotranslational protein targeting to membrane
R-HSA-192823 Viral mRNA Translation
R-HSA-2408557 Selenocysteine synthesis
R-HSA-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-HSA-72649 Translation initiation complex formation
R-HSA-72689 Formation of a pool of free 40S subunits
R-HSA-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-HSA-72702 Ribosomal scanning and start codon recognition
R-HSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-HSA-72764 Eukaryotic Translation Termination
R-HSA-9010553 Regulation of expression of SLITs and ROBOs
R-HSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-HSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Miscellaneous databases

The Gene Wiki collection of pages on human genes and proteins

More...GeneWikii		RPS28

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		6234

Protein Ontology

More...PROi		PR:P62857

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000233927 Expressed in 201 organ(s), highest expression level in lower esophagus mucosa
GenevisibleiP62857 HS

Family and domain databases

CDDicd04457 S1_S28E, 1 hit
HAMAPiMF_00292 Ribosomal_S28e, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000289 Ribosomal_S28e
IPR028626 Ribosomal_S28e_CS
PANTHERiPTHR10769 PTHR10769, 1 hit
PfamiView protein in Pfam
PF01200 Ribosomal_S28e, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005541 Ribosomal_S28e, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS00961 RIBOSOMAL_S28E, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRS28_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P62857
Secondary accession number(s): P25112
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 16, 2004
Last sequence update: August 16, 2004
Last modified: February 13, 2019
This is version 149 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
  4. Ribosomal proteins
    Ribosomal proteins families and list of entries
  5. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
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