UniProtKB - P62399 (RL5_ECOLI)
Protein
50S ribosomal protein L5
Gene
rplE
Organism
Escherichia coli (strain K12)
Status
Functioni
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. Its 5S rRNA binding is significantly enhanced in the presence of L18.3 Publications
In the 70S ribosome in the initiation state (PubMed:12809609) was modeled to contact protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; the protein-protein contacts between S13 and L5 in B1b change in the model with bound EF-G implicating this bridge in subunit movement (PubMed:12809609 and PubMed:18723842). In the two 3.5 A resolved ribosome structures (PubMed:16272117) the contacts between L5, S13 and S19 are different, confirming the dynamic nature of this interaction.3 Publications
Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.1 Publication
Miscellaneous
Identified as a multicopy suppressor of the slow growth phenotype of an rsgA (yjeQ) deletion mutant.1 Publication
GO - Molecular functioni
- 5S rRNA binding Source: EcoCyc
- RNA binding Source: GO_Central
- structural constituent of ribosome Source: GO_Central
- tRNA binding Source: UniProtKB-UniRule
GO - Biological processi
- ribosomal large subunit assembly Source: EcoCyc
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding |
Enzyme and pathway databases
BioCyci | EcoCyc:EG10868-MONOMER MetaCyc:EG10868-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L5Alternative name(s): Large ribosomal subunit protein uL51 Publication |
Gene namesi | Name:rplE Ordered Locus Names:b3308, JW3270 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
Subcellular locationi
GO - Cellular componenti
- cytosol Source: EcoCyc
- cytosolic large ribosomal subunit Source: EcoCyc
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Initiator methioninei | Removed1 Publication | |||
ChainiPRO_0000124925 | 2 – 179 | 50S ribosomal protein L5Add BLAST | 178 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 3 | N6-acetyllysine1 Publication | 1 |
Keywords - PTMi
AcetylationProteomic databases
jPOSTi | P62399 |
PaxDbi | P62399 |
PRIDEi | P62399 |
PTM databases
iPTMneti | P62399 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit (PubMed:791672, PubMed:12809609, PubMed:12859903, PubMed:16272117, PubMed:25310980, PubMed:24844575, PubMed:27934701, PubMed:27906160, PubMed:27906161); part of the 5S rRNA/L5/L18/L25 subcomplex (PubMed:354687, PubMed:8925931). Contacts the 5S rRNA; cross-links to the P site tRNA (PubMed:8925931).
Forms a bridge to the 30S subunit in the 70S ribosome, contacting protein S13 and S19.
13 PublicationsProtein-protein interaction databases
BioGRIDi | 852112, 1 interactor |
ComplexPortali | CPX-3807, 50S large ribosomal subunit |
DIPi | DIP-35914N |
IntActi | P62399, 74 interactors |
STRINGi | 511145.b3308 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | P62399 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | P62399 |
Family & Domainsi
Sequence similaritiesi
Belongs to the universal ribosomal protein uL5 family.Curated
Phylogenomic databases
eggNOGi | COG0094, Bacteria |
HOGENOMi | CLU_061015_2_1_6 |
InParanoidi | P62399 |
PhylomeDBi | P62399 |
Family and domain databases
Gene3Di | 3.30.1440.10, 1 hit |
HAMAPi | MF_01333_B, Ribosomal_L5_B, 1 hit |
InterProi | View protein in InterPro IPR002132, Ribosomal_L5 IPR020930, Ribosomal_L5_bac-type IPR031309, Ribosomal_L5_C IPR020929, Ribosomal_L5_CS IPR022803, Ribosomal_L5_dom_sf IPR031310, Ribosomal_L5_N |
PANTHERi | PTHR11994, PTHR11994, 1 hit |
Pfami | View protein in Pfam PF00281, Ribosomal_L5, 1 hit PF00673, Ribosomal_L5_C, 1 hit |
PIRSFi | PIRSF002161, Ribosomal_L5, 1 hit |
SUPFAMi | SSF55282, SSF55282, 1 hit |
PROSITEi | View protein in PROSITE PS00358, RIBOSOMAL_L5, 1 hit |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
P62399-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAKLHDYYKD EVVKKLMTEF NYNSVMQVPR VEKITLNMGV GEAIADKKLL
60 70 80 90 100
DNAAADLAAI SGQKPLITKA RKSVAGFKIR QGYPIGCKVT LRGERMWEFF
110 120 130 140 150
ERLITIAVPR IRDFRGLSAK SFDGRGNYSM GVREQIIFPE IDYDKVDRVR
160 170
GLDITITTTA KSDEEGRALL AAFDFPFRK
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 94 | E → Q AA sequence (PubMed:791672).Curated | 1 | |
Sequence conflicti | 127 | N → D AA sequence (PubMed:791672).Curated | 1 |
Mass spectrometryi
Molecular mass is 20169.8 Da. Determined by MALDI. 1 Publication
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | X01563 Genomic DNA Translation: CAA25717.1 U18997 Genomic DNA Translation: AAA58105.1 U00096 Genomic DNA Translation: AAC76333.1 AP009048 Genomic DNA Translation: BAE77983.1 M10195 Genomic DNA Translation: AAA24051.1 |
PIRi | G65123, R5EC5 |
RefSeqi | NP_417767.1, NC_000913.3 WP_001096200.1, NZ_STEB01000038.1 |
Genome annotation databases
EnsemblBacteriai | AAC76333; AAC76333; b3308 BAE77983; BAE77983; BAE77983 |
GeneIDi | 52075117 947800 |
KEGGi | ecj:JW3270 eco:b3308 |
PATRICi | fig|1411691.4.peg.3423 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | X01563 Genomic DNA Translation: CAA25717.1 U18997 Genomic DNA Translation: AAA58105.1 U00096 Genomic DNA Translation: AAC76333.1 AP009048 Genomic DNA Translation: BAE77983.1 M10195 Genomic DNA Translation: AAA24051.1 |
PIRi | G65123, R5EC5 |
RefSeqi | NP_417767.1, NC_000913.3 WP_001096200.1, NZ_STEB01000038.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1ML5 | electron microscopy | 14.00 | g | 2-177 | [»] | |
2J28 | electron microscopy | 8.00 | F | 2-179 | [»] | |
2RDO | electron microscopy | 9.10 | F | 2-179 | [»] | |
3BBX | electron microscopy | 10.00 | F | 2-179 | [»] | |
3J5L | electron microscopy | 6.60 | F | 2-178 | [»] | |
3J5S | electron microscopy | 7.50 | G | 2-179 | [»] | |
3J7Z | electron microscopy | 3.90 | F | 1-179 | [»] | |
3J8G | electron microscopy | 5.00 | F | 1-179 | [»] | |
3J9Y | electron microscopy | 3.90 | F | 1-179 | [»] | |
3J9Z | electron microscopy | 3.60 | L7 | 2-179 | [»] | |
3JA1 | electron microscopy | 3.60 | LG | 2-179 | [»] | |
3JBU | electron microscopy | 3.64 | f | 1-179 | [»] | |
3JBV | electron microscopy | 3.32 | f | 1-179 | [»] | |
3JCD | electron microscopy | 3.70 | F | 1-179 | [»] | |
3JCE | electron microscopy | 3.20 | F | 1-179 | [»] | |
3JCJ | electron microscopy | 3.70 | E | 1-179 | [»] | |
3JCN | electron microscopy | 4.60 | F | 1-179 | [»] | |
4CSU | electron microscopy | 5.50 | F | 2-179 | [»] | |
4U1U | X-ray | 2.95 | BF/DF | 2-178 | [»] | |
4U1V | X-ray | 3.00 | BF/DF | 2-178 | [»] | |
4U20 | X-ray | 2.90 | BF/DF | 2-178 | [»] | |
4U24 | X-ray | 2.90 | BF/DF | 2-178 | [»] | |
4U25 | X-ray | 2.90 | BF/DF | 2-178 | [»] | |
4U26 | X-ray | 2.80 | BF/DF | 2-178 | [»] | |
4U27 | X-ray | 2.80 | BF/DF | 2-178 | [»] | |
4UY8 | electron microscopy | 3.80 | F | 2-178 | [»] | |
4V47 | electron microscopy | 12.30 | AD | 2-179 | [»] | |
4V48 | electron microscopy | 11.50 | AD | 2-179 | [»] | |
4V4H | X-ray | 3.46 | BF/DF | 1-179 | [»] | |
4V4Q | X-ray | 3.46 | BF/DF | 2-179 | [»] | |
4V4V | electron microscopy | 15.00 | BD | 3-179 | [»] | |
4V4W | electron microscopy | 15.00 | BD | 3-179 | [»] | |
4V50 | X-ray | 3.22 | BF/DF | 2-179 | [»] | |
4V52 | X-ray | 3.21 | BF/DF | 2-179 | [»] | |
4V53 | X-ray | 3.54 | BF/DF | 2-179 | [»] | |
4V54 | X-ray | 3.30 | BF/DF | 2-179 | [»] | |
4V55 | X-ray | 4.00 | BF/DF | 2-179 | [»] | |
4V56 | X-ray | 3.93 | BF/DF | 2-179 | [»] | |
4V57 | X-ray | 3.50 | BF/DF | 2-179 | [»] | |
4V5B | X-ray | 3.74 | AF/CF | 2-179 | [»] | |
4V5H | electron microscopy | 5.80 | BF | 2-179 | [»] | |
4V5Y | X-ray | 4.45 | BF/DF | 2-179 | [»] | |
4V64 | X-ray | 3.50 | BF/DF | 2-179 | [»] | |
4V65 | electron microscopy | 9.00 | B2 | 2-179 | [»] | |
4V66 | electron microscopy | 9.00 | B2 | 2-179 | [»] | |
4V69 | electron microscopy | 6.70 | BF | 2-179 | [»] | |
4V6C | X-ray | 3.19 | BF/DF | 1-179 | [»] | |
4V6D | X-ray | 3.81 | BF/DF | 1-179 | [»] | |
4V6E | X-ray | 3.71 | BF/DF | 1-179 | [»] | |
4V6K | electron microscopy | 8.25 | AG | 1-179 | [»] | |
4V6L | electron microscopy | 13.20 | BG | 1-179 | [»] | |
4V6M | electron microscopy | 7.10 | BF | 2-179 | [»] | |
4V6N | electron microscopy | 12.10 | AG | 2-179 | [»] | |
4V6O | electron microscopy | 14.70 | BG | 2-179 | [»] | |
4V6P | electron microscopy | 13.50 | BG | 2-179 | [»] | |
4V6Q | electron microscopy | 11.50 | BG | 2-179 | [»] | |
4V6R | electron microscopy | 11.50 | BG | 2-179 | [»] | |
4V6S | electron microscopy | 13.10 | AG | 2-179 | [»] | |
4V6T | electron microscopy | 8.30 | BF | 2-178 | [»] | |
4V6V | electron microscopy | 9.80 | BG | 2-179 | [»] | |
4V6Y | electron microscopy | 12.00 | BF | 1-179 | [»] | |
4V6Z | electron microscopy | 12.00 | BF | 1-179 | [»] | |
4V70 | electron microscopy | 17.00 | BF | 1-179 | [»] | |
4V71 | electron microscopy | 20.00 | BF | 1-179 | [»] | |
4V72 | electron microscopy | 13.00 | BF | 1-179 | [»] | |
4V73 | electron microscopy | 15.00 | BF | 1-179 | [»] | |
4V74 | electron microscopy | 17.00 | BF | 1-179 | [»] | |
4V75 | electron microscopy | 12.00 | BF | 1-179 | [»] | |
4V76 | electron microscopy | 17.00 | BF | 1-179 | [»] | |
4V77 | electron microscopy | 17.00 | BF | 1-179 | [»] | |
4V78 | electron microscopy | 20.00 | BF | 1-179 | [»] | |
4V79 | electron microscopy | 15.00 | BF | 1-179 | [»] | |
4V7A | electron microscopy | 9.00 | BF | 1-179 | [»] | |
4V7B | electron microscopy | 6.80 | BF | 1-179 | [»] | |
4V7C | electron microscopy | 7.60 | BG | 2-179 | [»] | |
4V7D | electron microscopy | 7.60 | AG | 2-179 | [»] | |
4V7I | electron microscopy | 9.60 | AF | 1-179 | [»] | |
4V7S | X-ray | 3.25 | BF | 2-178 | [»] | |
DF | 2-179 | [»] | ||||
4V7T | X-ray | 3.19 | BF | 2-178 | [»] | |
DF | 2-179 | [»] | ||||
4V7U | X-ray | 3.10 | BF/DF | 2-179 | [»] | |
4V7V | X-ray | 3.29 | BF | 2-178 | [»] | |
DF | 2-179 | [»] | ||||
4V85 | X-ray | 3.20 | BF | 1-179 | [»] | |
4V89 | X-ray | 3.70 | BF | 1-179 | [»] | |
4V9C | X-ray | 3.30 | BF/DF | 1-179 | [»] | |
4V9D | X-ray | 3.00 | CF/DF | 2-178 | [»] | |
4V9O | X-ray | 2.90 | AF/CF/EF/GF | 1-179 | [»] | |
4V9P | X-ray | 2.90 | AF/CF/EF/GF | 1-179 | [»] | |
4WF1 | X-ray | 3.09 | BF/DF | 2-178 | [»] | |
4WOI | X-ray | 3.00 | BF/CF | 1-179 | [»] | |
4WWW | X-ray | 3.10 | RF/YF | 2-179 | [»] | |
4YBB | X-ray | 2.10 | CF/DF | 2-178 | [»] | |
5ADY | electron microscopy | 4.50 | F | 1-179 | [»] | |
5AFI | electron microscopy | 2.90 | F | 1-179 | [»] | |
5AKA | electron microscopy | 5.70 | F | 2-179 | [»] | |
5GAD | electron microscopy | 3.70 | F | 1-179 | [»] | |
5GAE | electron microscopy | 3.33 | F | 1-179 | [»] | |
5GAF | electron microscopy | 4.30 | F | 2-178 | [»] | |
5GAG | electron microscopy | 3.80 | F | 1-179 | [»] | |
5GAH | electron microscopy | 3.80 | F | 1-179 | [»] | |
5H5U | electron microscopy | 3.00 | F | 2-179 | [»] | |
5IQR | electron microscopy | 3.00 | E | 1-179 | [»] | |
5IT8 | X-ray | 3.12 | CF/DF | 2-178 | [»] | |
5J5B | X-ray | 2.80 | CF/DF | 2-178 | [»] | |
5J7L | X-ray | 3.00 | CF/DF | 2-178 | [»] | |
5J88 | X-ray | 3.32 | CF/DF | 2-179 | [»] | |
5J8A | X-ray | 3.10 | CF/DF | 2-179 | [»] | |
5J91 | X-ray | 2.96 | CF/DF | 2-179 | [»] | |
5JC9 | X-ray | 3.03 | CF/DF | 2-178 | [»] | |
5JTE | electron microscopy | 3.60 | BF | 1-179 | [»] | |
5JU8 | electron microscopy | 3.60 | BF | 1-179 | [»] | |
5KCR | electron microscopy | 3.60 | 1G | 1-179 | [»] | |
5KCS | electron microscopy | 3.90 | 1G | 1-179 | [»] | |
5KPS | electron microscopy | 3.90 | E | 1-179 | [»] | |
5KPV | electron microscopy | 4.10 | D | 1-179 | [»] | |
5KPW | electron microscopy | 3.90 | D | 1-179 | [»] | |
5KPX | electron microscopy | 3.90 | D | 1-179 | [»] | |
5L3P | electron microscopy | 3.70 | G | 1-179 | [»] | |
5LZA | electron microscopy | 3.60 | F | 2-178 | [»] | |
5LZB | electron microscopy | 5.30 | F | 2-178 | [»] | |
5LZC | electron microscopy | 4.80 | F | 2-178 | [»] | |
5LZD | electron microscopy | 3.40 | F | 2-178 | [»] | |
5LZE | electron microscopy | 3.50 | F | 2-178 | [»] | |
5LZF | electron microscopy | 4.60 | F | 2-178 | [»] | |
5MDV | electron microscopy | 2.97 | E | 1-179 | [»] | |
5MDW | electron microscopy | 3.06 | E | 1-179 | [»] | |
5MDY | electron microscopy | 3.35 | E | 1-179 | [»] | |
5MDZ | electron microscopy | 3.10 | E | 1-179 | [»] | |
5MGP | electron microscopy | 3.10 | F | 2-178 | [»] | |
5NCO | electron microscopy | 4.80 | F | 2-178 | [»] | |
5NP6 | electron microscopy | 3.60 | d | 2-178 | [»] | |
5NWY | electron microscopy | 2.93 | S | 1-179 | [»] | |
5O2R | electron microscopy | 3.40 | F | 2-178 | [»] | |
5U4I | electron microscopy | 3.50 | F | 1-179 | [»] | |
5U9F | electron microscopy | 3.20 | 07 | 1-179 | [»] | |
5U9G | electron microscopy | 3.20 | 07 | 1-179 | [»] | |
5UYK | electron microscopy | 3.90 | 07 | 2-178 | [»] | |
5UYL | electron microscopy | 3.60 | 07 | 2-178 | [»] | |
5UYM | electron microscopy | 3.20 | 07 | 2-178 | [»] | |
5UYN | electron microscopy | 4.00 | 07 | 2-178 | [»] | |
5UYP | electron microscopy | 3.90 | 07 | 2-178 | [»] | |
5UYQ | electron microscopy | 3.80 | 07 | 2-178 | [»] | |
5WDT | electron microscopy | 3.00 | F | 2-178 | [»] | |
5WE4 | electron microscopy | 3.10 | F | 2-178 | [»] | |
5WE6 | electron microscopy | 3.40 | F | 2-178 | [»] | |
5WFK | electron microscopy | 3.40 | F | 2-178 | [»] | |
6BU8 | electron microscopy | 3.50 | 07 | 2-178 | [»] | |
6BY1 | X-ray | 3.94 | CF/DF | 2-178 | [»] | |
6C4I | electron microscopy | 3.24 | F | 2-178 | [»] | |
6ENF | electron microscopy | 3.20 | F | 2-178 | [»] | |
6ENJ | electron microscopy | 3.70 | F | 2-178 | [»] | |
6ENU | electron microscopy | 3.10 | F | 2-178 | [»] | |
6GBZ | electron microscopy | 3.80 | F | 2-178 | [»] | |
6GC0 | electron microscopy | 3.80 | F | 2-178 | [»] | |
6GC4 | electron microscopy | 4.30 | F | 2-178 | [»] | |
6GC8 | electron microscopy | 3.80 | F | 2-178 | [»] | |
6GWT | electron microscopy | 3.80 | F | 2-178 | [»] | |
6GXM | electron microscopy | 3.80 | F | 2-178 | [»] | |
6GXN | electron microscopy | 3.90 | F | 2-178 | [»] | |
6GXO | electron microscopy | 3.90 | F | 2-178 | [»] | |
6GXP | electron microscopy | 4.40 | F | 2-178 | [»] | |
6H4N | electron microscopy | 3.00 | F | 2-178 | [»] | |
6H58 | electron microscopy | 7.90 | F/FF | 2-178 | [»] | |
6HRM | electron microscopy | 2.96 | E | 2-178 | [»] | |
6I0Y | electron microscopy | 3.20 | F | 2-178 | [»] | |
6I7V | X-ray | 2.90 | CF/DF | 2-178 | [»] | |
6O9J | electron microscopy | 3.90 | F | 2-179 | [»] | |
6O9K | electron microscopy | 4.00 | F | 2-178 | [»] | |
6OFX | electron microscopy | 3.30 | e | 2-178 | [»] | |
6OG7 | electron microscopy | 3.30 | e | 2-178 | [»] | |
6ORE | electron microscopy | 2.90 | E | 2-178 | [»] | |
6ORL | electron microscopy | 3.50 | E | 2-178 | [»] | |
6OST | electron microscopy | 4.20 | E | 2-178 | [»] | |
6OT3 | electron microscopy | 3.90 | E | 2-178 | [»] | |
6OUO | electron microscopy | 3.70 | E | 2-178 | [»] | |
6Q97 | electron microscopy | 3.90 | E | 2-178 | [»] | |
6Q98 | electron microscopy | 4.30 | E | 1-179 | [»] | |
6Q9A | electron microscopy | 3.70 | E | 2-178 | [»] | |
6QDW | electron microscopy | 2.83 | f | 1-179 | [»] | |
6QUL | electron microscopy | 3.00 | F | 1-179 | [»] | |
6S0K | electron microscopy | 3.10 | F | 1-179 | [»] | |
6SZS | electron microscopy | 3.06 | F | 1-179 | [»] | |
6TBV | electron microscopy | 2.70 | L051 | 1-179 | [»] | |
6TC3 | electron microscopy | 2.70 | L051 | 1-179 | [»] | |
6WD6 | electron microscopy | 3.70 | e | 2-178 | [»] | |
6WDB | electron microscopy | 4.00 | e | 2-178 | [»] | |
6WDC | electron microscopy | 4.20 | e | 2-178 | [»] | |
6WDD | electron microscopy | 3.20 | e | 2-178 | [»] | |
6WDE | electron microscopy | 3.00 | e | 2-178 | [»] | |
6WDF | electron microscopy | 3.30 | e | 2-178 | [»] | |
6WDG | electron microscopy | 3.30 | e | 2-178 | [»] | |
6WDH | electron microscopy | 4.30 | e | 2-178 | [»] | |
6WDI | electron microscopy | 4.00 | e | 2-178 | [»] | |
6WDJ | electron microscopy | 3.70 | e | 2-178 | [»] | |
6WDK | electron microscopy | 3.60 | e | 2-178 | [»] | |
6WDL | electron microscopy | 3.70 | e | 2-178 | [»] | |
6WDM | electron microscopy | 3.60 | e | 2-178 | [»] | |
6WNT | electron microscopy | 3.10 | e | 2-178 | [»] | |
6WNV | electron microscopy | 3.50 | e | 2-178 | [»] | |
6WNW | electron microscopy | 3.20 | e | 2-178 | [»] | |
6XZ7 | electron microscopy | 2.10 | F | 2-178 | [»] | |
6Y69 | electron microscopy | 2.86 | F | 2-178 | [»] | |
6YSR | electron microscopy | 3.10 | F | 1-179 | [»] | |
6YSS | electron microscopy | 2.60 | F | 1-179 | [»] | |
6YST | electron microscopy | 3.20 | F | 1-179 | [»] | |
6YSU | electron microscopy | 3.70 | F | 1-179 | [»] | |
7BV8 | electron microscopy | 3.14 | F | 1-179 | [»] | |
SMRi | P62399 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
BioGRIDi | 852112, 1 interactor |
ComplexPortali | CPX-3807, 50S large ribosomal subunit |
DIPi | DIP-35914N |
IntActi | P62399, 74 interactors |
STRINGi | 511145.b3308 |
PTM databases
iPTMneti | P62399 |
Proteomic databases
jPOSTi | P62399 |
PaxDbi | P62399 |
PRIDEi | P62399 |
Genome annotation databases
EnsemblBacteriai | AAC76333; AAC76333; b3308 BAE77983; BAE77983; BAE77983 |
GeneIDi | 52075117 947800 |
KEGGi | ecj:JW3270 eco:b3308 |
PATRICi | fig|1411691.4.peg.3423 |
Organism-specific databases
EchoBASEi | EB0861 |
Phylogenomic databases
eggNOGi | COG0094, Bacteria |
HOGENOMi | CLU_061015_2_1_6 |
InParanoidi | P62399 |
PhylomeDBi | P62399 |
Enzyme and pathway databases
BioCyci | EcoCyc:EG10868-MONOMER MetaCyc:EG10868-MONOMER |
Miscellaneous databases
EvolutionaryTracei | P62399 |
PROi | PR:P62399 |
Family and domain databases
Gene3Di | 3.30.1440.10, 1 hit |
HAMAPi | MF_01333_B, Ribosomal_L5_B, 1 hit |
InterProi | View protein in InterPro IPR002132, Ribosomal_L5 IPR020930, Ribosomal_L5_bac-type IPR031309, Ribosomal_L5_C IPR020929, Ribosomal_L5_CS IPR022803, Ribosomal_L5_dom_sf IPR031310, Ribosomal_L5_N |
PANTHERi | PTHR11994, PTHR11994, 1 hit |
Pfami | View protein in Pfam PF00281, Ribosomal_L5, 1 hit PF00673, Ribosomal_L5_C, 1 hit |
PIRSFi | PIRSF002161, Ribosomal_L5, 1 hit |
SUPFAMi | SSF55282, SSF55282, 1 hit |
PROSITEi | View protein in PROSITE PS00358, RIBOSOMAL_L5, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL5_ECOLI | |
Accessioni | P62399Primary (citable) accession number: P62399 Secondary accession number(s): P02389, Q2M6X3 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 21, 1986 |
Last sequence update: | January 23, 2007 | |
Last modified: | December 2, 2020 | |
This is version 167 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families - Ribosomal proteins
Ribosomal proteins families and list of entries