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Protein

40S ribosomal protein S11

Gene

Rps11

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

ReactomeiR-RNO-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-RNO-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-RNO-72649 Translation initiation complex formation
R-RNO-72689 Formation of a pool of free 40S subunits
R-RNO-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-RNO-72702 Ribosomal scanning and start codon recognition
R-RNO-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S11
Gene namesi
Name:Rps11
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi621026 Rps11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001285122 – 15840S ribosomal protein S11Add BLAST157

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanine1 Publication1
Modified residuei22CitrullineBy similarity1
Modified residuei38N6-acetyllysineBy similarity1
Modified residuei45N6-acetyllysineBy similarity1
Modified residuei58N6-acetyllysineBy similarity1
Lipidationi60S-palmitoyl cysteineBy similarity1
Modified residuei67PhosphoserineBy similarity1
Modified residuei69Omega-N-methylarginineBy similarity1
Modified residuei110PhosphoserineBy similarity1

Post-translational modificationi

Citrullinated by PADI4.By similarity

Keywords - PTMi

Acetylation, Citrullination, Lipoprotein, Methylation, Palmitate, Phosphoprotein

Proteomic databases

PaxDbiP62282
PRIDEiP62282

PTM databases

iPTMnetiP62282
PhosphoSitePlusiP62282

Expressioni

Gene expression databases

BgeeiENSRNOG00000020595
GenevisibleiP62282 RN

Interactioni

Protein-protein interaction databases

BioGridi249646, 1 interactor
IntActiP62282, 2 interactors
STRINGi10116.ENSRNOP00000061250

Structurei

3D structure databases

ProteinModelPortaliP62282
SMRiP62282
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1728 Eukaryota
COG0186 LUCA
GeneTreeiENSGT00390000002732
HOGENOMiHOG000231341
HOVERGENiHBG004670
InParanoidiP62282
KOiK02949
OMAiKKYERYE
OrthoDBiEOG091G0QVV
PhylomeDBiP62282

Family and domain databases

InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR032440 Ribosomal_S11_N
IPR000266 Ribosomal_S17/S11
IPR028333 Ribosomal_S17_arc-typ
IPR019979 Ribosomal_S17_CS
PANTHERiPTHR10744 PTHR10744, 1 hit
PfamiView protein in Pfam
PF00366 Ribosomal_S17, 1 hit
PF16205 Ribosomal_S17_N, 1 hit
PRINTSiPR00973 RIBOSOMALS17
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001295 Ribosomal_S17, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR03630 uS17_arch, 1 hit
PROSITEiView protein in PROSITE
PS00056 RIBOSOMAL_S17, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62282-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADIQTERAY QKQPTIFQNK KRVLLGETGK EKLPRYYKNI GLGFKTPKEA
60 70 80 90 100
IEGTYIDKKC PFTGNVSIRG RILSGVVTKM KMQRTIVIRR DYLHYIRKYN
110 120 130 140 150
RFEKRHKNMS VHLSPCFRDV QIGDIVTVGE CRPLSKTVRF NVLKVTKAAG

TKKQFQKF
Length:158
Mass (Da):18,431
Last modified:January 23, 2007 - v3
Checksum:i9FB75DC1D99614B0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K03250 mRNA Translation: AAA42076.1
PIRiA22618 R3RT11
RefSeqiNP_112372.1, NM_031110.1
UniGeneiRn.2177

Genome annotation databases

EnsembliENSRNOT00000066328; ENSRNOP00000061250; ENSRNOG00000020595
GeneIDi81774
KEGGirno:81774
UCSCiRGD:621026 rat

Similar proteinsi

Entry informationi

Entry nameiRS11_RAT
AccessioniPrimary (citable) accession number: P62282
Secondary accession number(s): P04643
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 13, 1987
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 106 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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