UniProtKB - P62007 (RL40_PYRHO)
Protein
50S ribosomal protein L40e
Gene
rpl40e
Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Functioni
GO - Molecular functioni
- structural constituent of ribosome Source: InterPro
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein |
Enzyme and pathway databases
BioCyci | PHOR70601:G1G39-1269-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L40eUniRule annotation |
Gene namesi | Name:rpl40eUniRule annotation Ordered Locus Names:PH1306.1 ORF Names:PHS037 |
Organismi | Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) |
Taxonomic identifieri | 70601 [NCBI] |
Taxonomic lineagei | Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000138788 | 1 – 51 | 50S ribosomal protein L40eAdd BLAST | 51 |
Family & Domainsi
Sequence similaritiesi
Belongs to the eukaryotic ribosomal protein eL40 family.UniRule annotation
Phylogenomic databases
eggNOGi | arCOG04049, Archaea |
OMAi | MRCGATN |
OrthoDBi | 127293at2157 |
Family and domain databases
Gene3Di | 2.20.28.70, 1 hit |
HAMAPi | MF_00788, Ribosomal_L40e, 1 hit |
InterProi | View protein in InterPro IPR038587, L40e_sf IPR001975, Ribosomal_L40e IPR023657, Ribosomal_L40e_arc IPR011332, Ribosomal_zn-bd |
PANTHERi | PTHR39649, PTHR39649, 1 hit |
SMARTi | View protein in SMART SM01377, Ribosomal_L40e, 1 hit |
SUPFAMi | SSF57829, SSF57829, 1 hit |
i Sequence
Sequence statusi: Complete.
P62007-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MARFPEAEAR IFKKYICLRC GATNPWGAEK CRKCGYKRLR PKAREPRGGG
R
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BA000001 Genomic DNA Translation: BAA30411.1 |
PIRi | C71001 |
RefSeqi | WP_010867964.1, NC_000961.1 |
Genome annotation databases
EnsemblBacteriai | BAA30411; BAA30411; BAA30411 |
GeneIDi | 1496190 |
KEGGi | pho:PHS037 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BA000001 Genomic DNA Translation: BAA30411.1 |
PIRi | C71001 |
RefSeqi | WP_010867964.1, NC_000961.1 |
3D structure databases
SMRi | P62007 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 70601.3257728 |
Genome annotation databases
EnsemblBacteriai | BAA30411; BAA30411; BAA30411 |
GeneIDi | 1496190 |
KEGGi | pho:PHS037 |
Phylogenomic databases
eggNOGi | arCOG04049, Archaea |
OMAi | MRCGATN |
OrthoDBi | 127293at2157 |
Enzyme and pathway databases
BioCyci | PHOR70601:G1G39-1269-MONOMER |
Family and domain databases
Gene3Di | 2.20.28.70, 1 hit |
HAMAPi | MF_00788, Ribosomal_L40e, 1 hit |
InterProi | View protein in InterPro IPR038587, L40e_sf IPR001975, Ribosomal_L40e IPR023657, Ribosomal_L40e_arc IPR011332, Ribosomal_zn-bd |
PANTHERi | PTHR39649, PTHR39649, 1 hit |
SMARTi | View protein in SMART SM01377, Ribosomal_L40e, 1 hit |
SUPFAMi | SSF57829, SSF57829, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL40_PYRHO | |
Accessioni | P62007Primary (citable) accession number: P62007 Secondary accession number(s): O74010 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 7, 2004 |
Last sequence update: | June 7, 2004 | |
Last modified: | December 2, 2020 | |
This is version 78 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Documents
- SIMILARITY comments
Index of protein domains and families - Ribosomal proteins
Ribosomal proteins families and list of entries