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Protein

40S ribosomal protein S20

Gene

Rps20

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S20
Gene namesi
Name:Rps20
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componentsi: Chromosome 3, Chromosome 5, Chromosome 9

Organism-specific databases

RGDi621037 Rps20

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001466852 – 11940S ribosomal protein S20Add BLAST118

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1
Cross-linki4Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)By similarity
Modified residuei8N6-succinyllysine; alternateBy similarity1
Cross-linki8Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternateBy similarity
Modified residuei9PhosphothreonineBy similarity1
Modified residuei34N6-acetyllysineBy similarity1
Modified residuei75N6-acetyllysineBy similarity1
Modified residuei93PhosphoserineBy similarity1

Post-translational modificationi

Monoubiquitinated by ZNF598 when a ribosome has stalled during translation of poly(A) sequences, leading to preclude synthesis of a long poly-lysine tail and initiate the ribosome quality control (RQC) pathway to degrade the potentially detrimental aberrant nascent polypeptide.By similarity

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiP60868
PRIDEiP60868

PTM databases

iPTMnetiP60868
PhosphoSitePlusiP60868

Expressioni

Gene expression databases

BgeeiENSRNOG00000029627
GenevisibleiP60868 RN

Interactioni

Subunit structurei

Component of the 40S small ribosomal subunit.By similarity

Protein-protein interaction databases

BioGridi250778, 3 interactors
IntActiP60868, 2 interactors
STRINGi10116.ENSRNOP00000066077

Structurei

3D structure databases

ProteinModelPortaliP60868
SMRiP60868
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0900 Eukaryota
COG0051 LUCA
GeneTreeiENSGT00390000003248
HOGENOMiHOG000270245
HOVERGENiHBG004448
InParanoidiP60868
KOiK02969
OMAiWDRYELK
OrthoDBiEOG091G0VNB
PhylomeDBiP60868
TreeFamiTF300222

Family and domain databases

Gene3Di3.30.70.600, 1 hit
HAMAPiMF_00508 Ribosomal_S10, 1 hit
InterProiView protein in InterPro
IPR001848 Ribosomal_S10
IPR018268 Ribosomal_S10_CS
IPR027486 Ribosomal_S10_dom
IPR036838 Ribosomal_S10_dom_sf
IPR005729 Ribosomal_S10_euk/arc
PANTHERiPTHR11700 PTHR11700, 1 hit
PfamiView protein in Pfam
PF00338 Ribosomal_S10, 1 hit
PRINTSiPR00971 RIBOSOMALS10
SMARTiView protein in SMART
SM01403 Ribosomal_S10, 1 hit
SUPFAMiSSF54999 SSF54999, 1 hit
TIGRFAMsiTIGR01046 uS10_euk_arch, 1 hit
PROSITEiView protein in PROSITE
PS00361 RIBOSOMAL_S10, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P60868-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFKDTGKTP VEPEVAIHRI RITLTSRNVK SLEKVCADLI RGAKEKNLKV
60 70 80 90 100
KGPVRMPTKT LRITTRKTPC GEGSKTWDRF QMRIHKRLID LHSPSEIVKQ
110
ITSISIEPGV EVEVTIADA
Length:119
Mass (Da):13,373
Last modified:April 13, 2004 - v1
Checksum:i8802DF7894ADDF94
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X51537 mRNA Translation: CAA35917.1
BC058496 mRNA Translation: AAH58496.1
PIRiS14682 R3RT20
RefSeqiNP_001007604.1, NM_001007603.2
XP_002726693.1, XM_002726647.4
XP_002727194.1, XM_002727148.5
XP_002729204.1, XM_002729158.5
XP_002729620.1, XM_002729574.4
XP_002730040.1, XM_002729994.5
XP_003753765.1, XM_003753717.4
UniGeneiRn.103133

Genome annotation databases

EnsembliENSRNOT00000040481; ENSRNOP00000066077; ENSRNOG00000030596
ENSRNOT00000041813; ENSRNOP00000065886; ENSRNOG00000029627
ENSRNOT00000051449; ENSRNOP00000069127; ENSRNOG00000030345
GeneIDi100359951
100362149
100362684
122772
KEGGirno:100359951
rno:100362149
rno:100362684
rno:122772
UCSCiRGD:621037 rat

Similar proteinsi

Entry informationi

Entry nameiRS20_RAT
AccessioniPrimary (citable) accession number: P60868
Secondary accession number(s): P17075
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: April 13, 2004
Last modified: May 23, 2018
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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