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Protein

50S ribosomal protein L37Ae

Gene

rpl37ae

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA.

Cofactori

Zn2+CuratedNote: Binds 1 zinc ion per subunit.Curated

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi39ZincUniRule annotation1
Metal bindingi42ZincUniRule annotation1
Metal bindingi57ZincUniRule annotation1
Metal bindingi60ZincUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri39 – 60C4-typeUniRule annotationAdd BLAST22

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L37AeUniRule annotation
Alternative name(s):
Ribosomal protein L43eUniRule annotation
Gene namesi
Name:rpl37aeUniRule annotation
Ordered Locus Names:rrnAC1669
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001398411 – 9250S ribosomal protein L37AeAdd BLAST92

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L2.UniRule annotation2 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC1669

Structurei

Secondary structure

192
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi11 – 14Combined sources4
Helixi20 – 34Combined sources15
Beta strandi37 – 39Combined sources3
Beta strandi40 – 42Combined sources3
Beta strandi45 – 51Combined sources7
Beta strandi54 – 57Combined sources4
Turni58 – 60Combined sources3
Beta strandi63 – 65Combined sources3
Beta strandi68 – 72Combined sources5
Helixi74 – 81Combined sources8

3D structure databases

ProteinModelPortaliP60619
SMRiP60619
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP60619

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL43 family. Putative zinc-binding subfamily.UniRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri39 – 60C4-typeUniRule annotationAdd BLAST22

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiarCOG04208 Archaea
COG1997 LUCA
HOGENOMiHOG000229493
KOiK02921
OrthoDBiPOG093Z0L6X

Family and domain databases

Gene3Di2.20.25.30, 1 hit
HAMAPiMF_00327 Ribosomal_L37Ae, 1 hit
InterProiView protein in InterPro
IPR002674 Ribosomal_L37ae
IPR011331 Ribosomal_L37ae/L37e
IPR011332 Ribosomal_zn-bd
PANTHERiPTHR43931 PTHR43931, 1 hit
PfamiView protein in Pfam
PF01780 Ribosomal_L37ae, 1 hit
SUPFAMiSSF57829 SSF57829, 1 hit
TIGRFAMsiTIGR00280 eL43_euk_arch, 1 hit

Sequencei

Sequence statusi: Complete.

P60619-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASKSGKTGS SGRFGARYGR VSRRRVAEIE SEMNEDHACP NCGEDRVDRQ
60 70 80 90
GTGIWQCSYC DYKFTGGSYK PETPGGKTVR RSIRAALSED EE
Length:92
Mass (Da):10,172
Last modified:January 4, 2005 - v2
Checksum:i89E52AFE761E9837
GO

Sequence cautioni

The sequence AAV46581 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA Translation: AAV46581.1 Different initiation.

Genome annotation databases

EnsemblBacteriaiAAV46581; AAV46581; rrnAC1669
KEGGihma:rrnAC1669
PATRICifig|272569.17.peg.2356

Entry informationi

Entry nameiRL37A_HALMA
AccessioniPrimary (citable) accession number: P60619
Secondary accession number(s): Q5V1M1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 15, 2004
Last sequence update: January 4, 2005
Last modified: November 22, 2017
This is version 105 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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