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Protein

50S ribosomal protein L37Ae

Gene

rpl37ae

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA.

Cofactori

Zn2+CuratedNote: Binds 1 zinc ion per subunit.Curated

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi39ZincUniRule annotation1
Metal bindingi42ZincUniRule annotation1
Metal bindingi57ZincUniRule annotation1
Metal bindingi60ZincUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri39 – 60C4-typeUniRule annotationAdd BLAST22

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L37AeUniRule annotation
Alternative name(s):
Ribosomal protein L43eUniRule annotation
Gene namesi
Name:rpl37aeUniRule annotation
Ordered Locus Names:rrnAC1669
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001398411 – 9250S ribosomal protein L37AeAdd BLAST92

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L2.UniRule annotation2 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC1669

Structurei

Secondary structure

192
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP60619
SMRiP60619
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP60619

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL43 family. Putative zinc-binding subfamily.UniRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri39 – 60C4-typeUniRule annotationAdd BLAST22

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiarCOG04208 Archaea
COG1997 LUCA
HOGENOMiHOG000229493
KOiK02921
OrthoDBiPOG093Z0L6X

Family and domain databases

Gene3Di2.20.25.30, 1 hit
HAMAPiMF_00327 Ribosomal_L37Ae, 1 hit
InterProiView protein in InterPro
IPR002674 Ribosomal_L37ae
IPR011331 Ribosomal_L37ae/L37e
IPR011332 Ribosomal_zn-bd
PANTHERiPTHR43931 PTHR43931, 1 hit
PfamiView protein in Pfam
PF01780 Ribosomal_L37ae, 1 hit
SUPFAMiSSF57829 SSF57829, 1 hit
TIGRFAMsiTIGR00280 eL43_euk_arch, 1 hit

Sequencei

Sequence statusi: Complete.

P60619-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASKSGKTGS SGRFGARYGR VSRRRVAEIE SEMNEDHACP NCGEDRVDRQ
60 70 80 90
GTGIWQCSYC DYKFTGGSYK PETPGGKTVR RSIRAALSED EE
Length:92
Mass (Da):10,172
Last modified:January 4, 2005 - v2
Checksum:i89E52AFE761E9837
GO

Sequence cautioni

The sequence AAV46581 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA Translation: AAV46581.1 Different initiation.

Genome annotation databases

EnsemblBacteriaiAAV46581; AAV46581; rrnAC1669
KEGGihma:rrnAC1669
PATRICifig|272569.17.peg.2356

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA Translation: AAV46581.1 Different initiation.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40W12-19[»]
1JJ2X-ray2.40Y49-79[»]
1K73X-ray3.01149-79[»]
1K8AX-ray3.00149-79[»]
1K9MX-ray3.00149-79[»]
1KC8X-ray3.01149-79[»]
1KD1X-ray3.00149-79[»]
1KQSX-ray3.10Y49-79[»]
1M1KX-ray3.20149-79[»]
1M90X-ray2.80149-79[»]
1N8RX-ray3.00149-79[»]
1NJIX-ray3.00149-79[»]
1Q7YX-ray3.20149-79[»]
1Q81X-ray2.95149-79[»]
1Q82X-ray2.98149-79[»]
1Q86X-ray3.00149-79[»]
1QVFX-ray3.10Y49-79[»]
1QVGX-ray2.90Y49-79[»]
1S72X-ray2.40Z11-82[»]
1VQ4X-ray2.70Z11-92[»]
1VQ5X-ray2.60Z11-92[»]
1VQ6X-ray2.70Z11-92[»]
1VQ7X-ray2.50Z11-92[»]
1VQ8X-ray2.20Z11-92[»]
1VQ9X-ray2.40Z11-92[»]
1VQKX-ray2.30Z11-92[»]
1VQLX-ray2.30Z11-92[»]
1VQMX-ray2.30Z11-92[»]
1VQNX-ray2.40Z11-92[»]
1VQOX-ray2.20Z11-92[»]
1VQPX-ray2.25Z11-92[»]
1W2BX-ray3.50Y49-79[»]
1YHQX-ray2.40Z11-92[»]
1YI2X-ray2.65Z11-92[»]
1YIJX-ray2.60Z11-92[»]
1YITX-ray2.80Z11-92[»]
1YJ9X-ray2.90Z11-92[»]
1YJNX-ray3.00Z11-92[»]
1YJWX-ray2.90Z11-92[»]
2OTJX-ray2.90Z11-82[»]
2OTLX-ray2.70Z11-82[»]
2QA4X-ray3.00Z1-92[»]
2QEXX-ray2.90Z11-82[»]
3CC2X-ray2.40Z1-92[»]
3CC4X-ray2.70Z1-92[»]
3CC7X-ray2.70Z1-92[»]
3CCEX-ray2.75Z1-92[»]
3CCJX-ray2.70Z1-92[»]
3CCLX-ray2.90Z1-92[»]
3CCMX-ray2.55Z1-92[»]
3CCQX-ray2.90Z1-92[»]
3CCRX-ray3.00Z1-92[»]
3CCSX-ray2.95Z1-92[»]
3CCUX-ray2.80Z1-92[»]
3CCVX-ray2.90Z1-92[»]
3CD6X-ray2.75Z1-92[»]
3CMAX-ray2.80Z1-92[»]
3CMEX-ray2.95Z1-92[»]
3CPWX-ray2.70Y1-92[»]
3G4SX-ray3.20Z10-82[»]
3G6EX-ray2.70Z10-82[»]
3G71X-ray2.85Z10-82[»]
3I55X-ray3.11Z1-92[»]
3I56X-ray2.90Z1-92[»]
4ADXelectron microscopy6.60Z1-92[»]
4V9FX-ray2.40Z1-92[»]
ProteinModelPortaliP60619
SMRiP60619
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272569.rrnAC1669

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV46581; AAV46581; rrnAC1669
KEGGihma:rrnAC1669
PATRICifig|272569.17.peg.2356

Phylogenomic databases

eggNOGiarCOG04208 Archaea
COG1997 LUCA
HOGENOMiHOG000229493
KOiK02921
OrthoDBiPOG093Z0L6X

Miscellaneous databases

EvolutionaryTraceiP60619

Family and domain databases

Gene3Di2.20.25.30, 1 hit
HAMAPiMF_00327 Ribosomal_L37Ae, 1 hit
InterProiView protein in InterPro
IPR002674 Ribosomal_L37ae
IPR011331 Ribosomal_L37ae/L37e
IPR011332 Ribosomal_zn-bd
PANTHERiPTHR43931 PTHR43931, 1 hit
PfamiView protein in Pfam
PF01780 Ribosomal_L37ae, 1 hit
SUPFAMiSSF57829 SSF57829, 1 hit
TIGRFAMsiTIGR00280 eL43_euk_arch, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL37A_HALMA
AccessioniPrimary (citable) accession number: P60619
Secondary accession number(s): Q5V1M1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 15, 2004
Last sequence update: January 4, 2005
Last modified: October 10, 2018
This is version 106 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
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