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UniProtKB - P60617 (RL10E_HALMA)
Protein
50S ribosomal protein L10e
Gene
rpl10e
Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Functioni
This is 1 of 5 proteins that mediate the attachment of the 5S rRNA onto the large ribosomal subunit, stabilizing the orientation of adjacent RNA domains. Modeling places the A and P site tRNAs in close proximity to this protein.
GO - Molecular functioni
- rRNA binding Source: UniProtKB-KW
- structural constituent of ribosome Source: InterPro
- tRNA binding Source: UniProtKB-KW
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L10eUniRule annotation |
Gene namesi | Name:rpl10eUniRule annotation Ordered Locus Names:rrnAC2357 |
Organismi | Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui) |
Taxonomic identifieri | 272569 [NCBI] |
Taxonomic lineagei | Archaea › Euryarchaeota › Stenosarchaea group › Halobacteria › Halobacteriales › Haloarculaceae › Haloarcula › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000147132 | 1 – 177 | 50S ribosomal protein L10eAdd BLAST | 177 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit. Weakly binds 5S rRNA. Probably binds the A and P site tRNAs.
2 PublicationsProtein-protein interaction databases
IntActi | P60617, 27 interactors |
STRINGi | 272569.rrnAC2357 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | P60617 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | P60617 |
Family & Domainsi
Sequence similaritiesi
Belongs to the universal ribosomal protein uL16 family.UniRule annotation
Phylogenomic databases
eggNOGi | arCOG04113, Archaea |
HOGENOMi | CLU_084051_0_2_2 |
OMAi | HHVIREN |
Family and domain databases
CDDi | cd01433, Ribosomal_L16_L10e, 1 hit |
Gene3Di | 3.90.1170.10, 1 hit |
HAMAPi | MF_00448, Ribosomal_L10e, 1 hit |
InterProi | View protein in InterPro IPR001197, Ribosomal_L10e IPR016180, Ribosomal_L10e/L16 IPR036920, Ribosomal_L10e/L16_sf IPR022981, Ribosomal_L10e_arc IPR018255, Ribosomal_L10e_CS |
PANTHERi | PTHR11726, PTHR11726, 1 hit |
Pfami | View protein in Pfam PF00252, Ribosomal_L16, 1 hit |
PIRSFi | PIRSF005590, Ribosomal_L10, 1 hit |
SUPFAMi | SSF54686, SSF54686, 1 hit |
PROSITEi | View protein in PROSITE PS01257, RIBOSOMAL_L10E, 1 hit |
i Sequence
Sequence statusi: Complete.
P60617-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSDKPASMYR DIDKPAYTRR EYITGIPGSK IAQHKMGRKQ KDADDYPVQI
60 70 80 90 100
SLIVEETVQL RHGSLEASRL SANRHLIKEL GEEGDYKMTL RKFPHQVLRE
110 120 130 140 150
NKQATGAGAD RVSDGMRAAF GKIVGTAARV QAGEQLFTAY CNVEDAEHVK
160 170
EAFRRAYNKI TPSCRIKVER GEELLIA
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AY596297 Genomic DNA Translation: AAV47175.1 |
RefSeqi | WP_007189393.1, NZ_CP039138.1 |
Genome annotation databases
EnsemblBacteriai | AAV47175; AAV47175; rrnAC2357 |
GeneIDi | 40153255 |
KEGGi | hma:rrnAC2357 |
PATRICi | fig|272569.17.peg.2976 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AY596297 Genomic DNA Translation: AAV47175.1 |
RefSeqi | WP_007189393.1, NZ_CP039138.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1FFK | X-ray | 2.40 | F | 14-129 | [»] | |
1JJ2 | X-ray | 2.40 | H | 14-130 | [»] | |
1K73 | X-ray | 3.01 | J | 14-130 | [»] | |
1K8A | X-ray | 3.00 | J | 14-130 | [»] | |
1K9M | X-ray | 3.00 | J | 14-130 | [»] | |
1KC8 | X-ray | 3.01 | J | 14-130 | [»] | |
1KD1 | X-ray | 3.00 | J | 14-130 | [»] | |
1KQS | X-ray | 3.10 | H | 14-130 | [»] | |
1M1K | X-ray | 3.20 | J | 14-130 | [»] | |
1M90 | X-ray | 2.80 | J | 14-130 | [»] | |
1ML5 | electron microscopy | 14.00 | p | 18-129 | [»] | |
1N8R | X-ray | 3.00 | J | 14-130 | [»] | |
1NJI | X-ray | 3.00 | J | 14-130 | [»] | |
1Q7Y | X-ray | 3.20 | J | 14-130 | [»] | |
1Q81 | X-ray | 2.95 | J | 14-130 | [»] | |
1Q82 | X-ray | 2.98 | J | 14-130 | [»] | |
1Q86 | X-ray | 3.00 | J | 14-130 | [»] | |
1QVF | X-ray | 3.10 | H | 14-130 | [»] | |
1QVG | X-ray | 2.90 | H | 14-130 | [»] | |
1S72 | X-ray | 2.40 | H | 4-166 | [»] | |
1VQ4 | X-ray | 2.70 | H | 4-166 | [»] | |
1VQ5 | X-ray | 2.60 | H | 4-166 | [»] | |
1VQ6 | X-ray | 2.70 | H | 4-166 | [»] | |
1VQ7 | X-ray | 2.50 | H | 4-166 | [»] | |
1VQ8 | X-ray | 2.20 | H | 4-166 | [»] | |
1VQ9 | X-ray | 2.40 | H | 4-166 | [»] | |
1VQK | X-ray | 2.30 | H | 4-166 | [»] | |
1VQL | X-ray | 2.30 | H | 4-166 | [»] | |
1VQM | X-ray | 2.30 | H | 4-166 | [»] | |
1VQN | X-ray | 2.40 | H | 4-166 | [»] | |
1VQO | X-ray | 2.20 | H | 4-166 | [»] | |
1VQP | X-ray | 2.25 | H | 4-166 | [»] | |
1W2B | X-ray | 3.50 | H | 14-130 | [»] | |
1YHQ | X-ray | 2.40 | H | 1-177 | [»] | |
1YI2 | X-ray | 2.65 | H | 1-177 | [»] | |
1YIJ | X-ray | 2.60 | H | 1-177 | [»] | |
1YIT | X-ray | 2.80 | H | 1-177 | [»] | |
1YJ9 | X-ray | 2.90 | H | 1-177 | [»] | |
1YJN | X-ray | 3.00 | H | 1-177 | [»] | |
1YJW | X-ray | 2.90 | H | 1-177 | [»] | |
2OTJ | X-ray | 2.90 | H | 4-166 | [»] | |
2OTL | X-ray | 2.70 | H | 4-166 | [»] | |
2QA4 | X-ray | 3.00 | H | 4-177 | [»] | |
2QEX | X-ray | 2.90 | H | 1-177 | [»] | |
3CC2 | X-ray | 2.40 | H | 1-177 | [»] | |
3CC4 | X-ray | 2.70 | H | 1-177 | [»] | |
3CC7 | X-ray | 2.70 | H | 1-177 | [»] | |
3CCE | X-ray | 2.75 | H | 1-177 | [»] | |
3CCJ | X-ray | 2.70 | H | 1-177 | [»] | |
3CCL | X-ray | 2.90 | H | 1-177 | [»] | |
3CCM | X-ray | 2.55 | H | 1-177 | [»] | |
3CCQ | X-ray | 2.90 | H | 1-177 | [»] | |
3CCR | X-ray | 3.00 | H | 1-177 | [»] | |
3CCS | X-ray | 2.95 | H | 1-177 | [»] | |
3CCU | X-ray | 2.80 | H | 1-177 | [»] | |
3CCV | X-ray | 2.90 | H | 1-177 | [»] | |
3CD6 | X-ray | 2.75 | H | 1-177 | [»] | |
3CMA | X-ray | 2.80 | H | 1-177 | [»] | |
3CME | X-ray | 2.95 | H | 1-177 | [»] | |
3CPW | X-ray | 2.70 | H | 1-177 | [»] | |
3G4S | X-ray | 3.20 | H | 1-177 | [»] | |
3G6E | X-ray | 2.70 | H | 1-177 | [»] | |
3G71 | X-ray | 2.85 | H | 1-177 | [»] | |
3I55 | X-ray | 3.11 | H | 1-166 | [»] | |
3I56 | X-ray | 2.90 | H | 1-166 | [»] | |
4ADX | electron microscopy | 6.60 | H | 1-177 | [»] | |
4V9F | X-ray | 2.40 | H | 1-177 | [»] | |
SMRi | P60617 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
IntActi | P60617, 27 interactors |
STRINGi | 272569.rrnAC2357 |
Genome annotation databases
EnsemblBacteriai | AAV47175; AAV47175; rrnAC2357 |
GeneIDi | 40153255 |
KEGGi | hma:rrnAC2357 |
PATRICi | fig|272569.17.peg.2976 |
Phylogenomic databases
eggNOGi | arCOG04113, Archaea |
HOGENOMi | CLU_084051_0_2_2 |
OMAi | HHVIREN |
Miscellaneous databases
EvolutionaryTracei | P60617 |
Family and domain databases
CDDi | cd01433, Ribosomal_L16_L10e, 1 hit |
Gene3Di | 3.90.1170.10, 1 hit |
HAMAPi | MF_00448, Ribosomal_L10e, 1 hit |
InterProi | View protein in InterPro IPR001197, Ribosomal_L10e IPR016180, Ribosomal_L10e/L16 IPR036920, Ribosomal_L10e/L16_sf IPR022981, Ribosomal_L10e_arc IPR018255, Ribosomal_L10e_CS |
PANTHERi | PTHR11726, PTHR11726, 1 hit |
Pfami | View protein in Pfam PF00252, Ribosomal_L16, 1 hit |
PIRSFi | PIRSF005590, Ribosomal_L10, 1 hit |
SUPFAMi | SSF54686, SSF54686, 1 hit |
PROSITEi | View protein in PROSITE PS01257, RIBOSOMAL_L10E, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | RL10E_HALMA | |
Accessioni | P60617Primary (citable) accession number: P60617 Secondary accession number(s): Q5UZX7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | March 15, 2004 |
Last sequence update: | January 4, 2005 | |
Last modified: | September 29, 2021 | |
This is version 116 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families