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Protein

50S ribosomal protein L27

Gene

rpmA

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Found on the solvent side of the large subunit.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-1789-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L27
Gene namesi
Name:rpmA
Ordered Locus Names:TTHA1782
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001811942 – 8550S ribosomal protein L27Add BLAST84

Proteomic databases

PRIDEiP60493

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Protein-protein interaction databases

STRINGi300852.TTHA1782

Structurei

Secondary structure

185
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi36 – 39Combined sources4
Beta strandi44 – 47Combined sources4
Beta strandi51 – 53Combined sources3
Beta strandi59 – 71Combined sources13
Helixi73 – 75Combined sources3
Beta strandi77 – 83Combined sources7

3D structure databases

ProteinModelPortaliP60493
SMRiP60493
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP60493

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105K46 Bacteria
COG0211 LUCA
HOGENOMiHOG000111610
KOiK02899
OMAiKDHTLHA
PhylomeDBiP60493

Family and domain databases

HAMAPiMF_00539 Ribosomal_L27, 1 hit
InterProiView protein in InterPro
IPR001684 Ribosomal_L27
IPR018261 Ribosomal_L27_CS
PANTHERiPTHR15893 PTHR15893, 1 hit
PfamiView protein in Pfam
PF01016 Ribosomal_L27, 1 hit
PRINTSiPR00063 RIBOSOMALL27
ProDomiView protein in ProDom or Entries sharing at least one domain
PD003114 Ribosomal_L27, 1 hit
TIGRFAMsiTIGR00062 L27, 1 hit
PROSITEiView protein in PROSITE
PS00831 RIBOSOMAL_L27, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P60493-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHKKGLGST RNGRDSQAKR LGVKRYEGQV VRAGNILVRQ RGTRFKPGKN
60 70 80
VGMGRDFTLF ALVDGVVEFQ DRGRLGRYVH VRPLA
Length:85
Mass (Da):9,508
Last modified:January 23, 2007 - v3
Checksum:i7F046822769C8728
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti20R → D AA sequence (PubMed:11154066).Curated1
Sequence conflicti26Y → S AA sequence (PubMed:11154066).Curated1

Mass spectrometryi

Molecular mass is 9378 Da from positions 2 - 85. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD71605.1
RefSeqiWP_011228914.1, NC_006461.1
YP_145048.1, NC_006461.1

Genome annotation databases

EnsemblBacteriaiBAD71605; BAD71605; BAD71605
GeneIDi3168387
KEGGittj:TTHA1782
PATRICifig|300852.9.peg.1752

Similar proteinsi

Entry informationi

Entry nameiRL27_THET8
AccessioniPrimary (citable) accession number: P60493
Secondary accession number(s): P84123, Q5SHE8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 1, 2004
Last sequence update: January 23, 2007
Last modified: June 20, 2018
This is version 123 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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