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UniProtKB - P60492 (RL21_THET8)
Protein
50S ribosomal protein L21
Gene
rplU
Organism
Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Status
Functioni
This protein binds to 23S rRNA in the presence of protein L20 (By similarity).
Found on the solvent side of the large subunit.
UniRule annotationGO - Molecular functioni
- rRNA binding Source: UniProtKB-UniRule
- structural constituent of ribosome Source: InterPro
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L21UniRule annotation |
Gene namesi | Name:rplUUniRule annotation Ordered Locus Names:TTHA1783 |
Organismi | Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) |
Taxonomic identifieri | 300852 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000181018 | 1 – 101 | 50S ribosomal protein L21Add BLAST | 101 |
Interactioni
Subunit structurei
Contacts protein L20 (By similarity). Part of the 50S ribosomal subunit.
By similarityProtein-protein interaction databases
IntActi | P60492, 7 interactors |
STRINGi | 300852.55773165 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | P60492 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | P60492 |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL21 family.UniRule annotation
Phylogenomic databases
eggNOGi | COG0261, Bacteria |
HOGENOMi | CLU_061463_3_2_0 |
OMAi | HRQEITR |
PhylomeDBi | P60492 |
Family and domain databases
HAMAPi | MF_01363, Ribosomal_L21, 1 hit |
InterProi | View protein in InterPro IPR036164, L21-like_sf IPR028909, L21p-like IPR001787, Ribosomal_L21 |
PANTHERi | PTHR21349, PTHR21349, 1 hit |
Pfami | View protein in Pfam PF00829, Ribosomal_L21p, 1 hit |
SUPFAMi | SSF141091, SSF141091, 1 hit |
TIGRFAMsi | TIGR00061, L21, 1 hit |
i Sequence
Sequence statusi: Complete.
P60492-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MFAIVKTGGK QYRVEPGLKL RVEKLDAEPG ATVELPVLLL GGEKTVVGTP
60 70 80 90 100
VVEGASVVAE VLGHGRGKKI LVSKFKAKVQ YRRKKGHRQP YTELLIKEIR
G
Mass spectrometryi
Molecular mass is 11048 Da. Determined by MALDI. 1 Publication
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP008226 Genomic DNA Translation: BAD71606.1 |
RefSeqi | WP_008633581.1, NC_006461.1 YP_145049.1, NC_006461.1 |
Genome annotation databases
EnsemblBacteriai | BAD71606; BAD71606; BAD71606 |
GeneIDi | 3169471 |
KEGGi | ttj:TTHA1783 |
PATRICi | fig|300852.9.peg.1753 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP008226 Genomic DNA Translation: BAD71606.1 |
RefSeqi | WP_008633581.1, NC_006461.1 YP_145049.1, NC_006461.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1VVJ | X-ray | 3.44 | RV/YV | 1-101 | [»] | |
1VY4 | X-ray | 2.60 | BV/DV | 1-101 | [»] | |
1VY5 | X-ray | 2.55 | BV/DV | 1-101 | [»] | |
1VY6 | X-ray | 2.90 | BV/DV | 1-101 | [»] | |
1VY7 | X-ray | 2.80 | BV/DV | 1-101 | [»] | |
4L47 | X-ray | 3.22 | RV/YV | 1-101 | [»] | |
4L71 | X-ray | 3.90 | RV/YV | 1-101 | [»] | |
4LEL | X-ray | 3.90 | RV/YV | 1-101 | [»] | |
4LFZ | X-ray | 3.92 | RV/YV | 1-101 | [»] | |
4LNT | X-ray | 2.94 | RV/YV | 1-101 | [»] | |
4LSK | X-ray | 3.48 | RV/YV | 1-101 | [»] | |
4LT8 | X-ray | 3.14 | RV/YV | 1-101 | [»] | |
4P6F | X-ray | 3.60 | RV/YV | 1-101 | [»] | |
4P70 | X-ray | 3.68 | RV/YV | 1-101 | [»] | |
4TUA | X-ray | 3.60 | RV/YV | 1-101 | [»] | |
4TUB | X-ray | 3.60 | RV/YV | 1-101 | [»] | |
4TUC | X-ray | 3.60 | RV/YV | 1-101 | [»] | |
4TUD | X-ray | 3.60 | RV/YV | 1-101 | [»] | |
4TUE | X-ray | 3.50 | RV/YV | 1-101 | [»] | |
4V4P | X-ray | 5.50 | 2 | 1-101 | [»] | |
4V4X | X-ray | 5.00 | BU | 1-101 | [»] | |
4V4Y | X-ray | 5.50 | BU | 1-101 | [»] | |
4V4Z | X-ray | 4.51 | BU | 1-101 | [»] | |
4V51 | X-ray | 2.80 | BV/DV | 1-101 | [»] | |
4V5A | X-ray | 3.50 | BV/DV | 1-101 | [»] | |
4V5C | X-ray | 3.30 | BV/DV | 1-101 | [»] | |
4V5D | X-ray | 3.50 | BV/DV | 1-101 | [»] | |
4V5E | X-ray | 3.45 | BV/DV | 1-101 | [»] | |
4V5F | X-ray | 3.60 | BV/DV | 1-101 | [»] | |
4V5G | X-ray | 3.60 | BV/DV | 1-101 | [»] | |
4V5J | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4V5K | X-ray | 3.20 | BV/DV | 1-101 | [»] | |
4V5L | X-ray | 3.10 | BV | 1-101 | [»] | |
4V5M | electron microscopy | 7.80 | BV | 1-101 | [»] | |
4V5N | electron microscopy | 7.60 | BV | 1-101 | [»] | |
4V5P | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4V5Q | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4V5R | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4V5S | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4V68 | electron microscopy | 6.40 | BV | 1-101 | [»] | |
4V6A | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4V6F | X-ray | 3.10 | A2/D2 | 1-101 | [»] | |
4V6G | X-ray | 3.50 | B2/D2 | 1-101 | [»] | |
4V7J | X-ray | 3.30 | AV/BV | 1-101 | [»] | |
4V7K | X-ray | 3.60 | AV/BV | 1-101 | [»] | |
4V7L | X-ray | 3.00 | BV/DV | 1-101 | [»] | |
4V7M | X-ray | 3.45 | BV/DV | 1-101 | [»] | |
4V7W | X-ray | 3.00 | BV/DV | 1-101 | [»] | |
4V7X | X-ray | 3.00 | BV/DV | 1-101 | [»] | |
4V7Y | X-ray | 3.00 | BV/DV | 1-101 | [»] | |
4V7Z | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4V87 | X-ray | 3.10 | A2/D2 | 1-101 | [»] | |
4V8A | X-ray | 3.20 | AV/BV | 1-101 | [»] | |
4V8B | X-ray | 3.00 | B2/D2 | 1-101 | [»] | |
4V8C | X-ray | 3.30 | A2/B2 | 1-101 | [»] | |
4V8D | X-ray | 3.00 | B2/D2 | 1-101 | [»] | |
4V8E | X-ray | 3.30 | A2/C2 | 1-101 | [»] | |
4V8F | X-ray | 3.30 | A2/D2 | 1-101 | [»] | |
4V8G | X-ray | 3.00 | BV/DV | 1-101 | [»] | |
4V8H | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4V8I | X-ray | 2.70 | BV/DV | 1-101 | [»] | |
4V8J | X-ray | 3.90 | BV/DV | 1-101 | [»] | |
4V8N | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4V8O | X-ray | 3.80 | BV | 1-101 | [»] | |
4V8Q | X-ray | 3.10 | AV | 1-101 | [»] | |
4V8U | X-ray | 3.70 | BV/DV | 1-101 | [»] | |
4V8X | X-ray | 3.35 | BV/DV | 1-101 | [»] | |
4V90 | X-ray | 2.95 | BV | 1-101 | [»] | |
4V95 | X-ray | 3.20 | BV/DV | 1-101 | [»] | |
4V97 | X-ray | 3.52 | BV/DV | 1-101 | [»] | |
4V9A | X-ray | 3.30 | B2/D2 | 1-101 | [»] | |
4V9B | X-ray | 3.10 | B2/D2 | 1-101 | [»] | |
4V9H | X-ray | 2.86 | BV | 1-101 | [»] | |
4V9I | X-ray | 3.30 | BV/DV | 1-101 | [»] | |
4V9R | X-ray | 3.00 | BV/DV | 1-101 | [»] | |
4V9S | X-ray | 3.10 | BV/DV | 1-101 | [»] | |
4W2E | X-ray | 2.90 | V | 1-101 | [»] | |
4W2F | X-ray | 2.40 | BV/DV | 1-101 | [»] | |
4W2G | X-ray | 2.55 | BV/DV | 1-101 | [»] | |
4W2H | X-ray | 2.70 | BV/DV | 1-101 | [»] | |
4W2I | X-ray | 2.70 | BV/DV | 1-101 | [»] | |
4W4G | X-ray | 3.30 | RV/YV | 1-101 | [»] | |
4WPO | X-ray | 2.80 | AV/CV | 1-101 | [»] | |
4WQ1 | X-ray | 3.10 | 95/D8 | 1-101 | [»] | |
4WQF | X-ray | 2.80 | AV/CV | 1-101 | [»] | |
4WQR | X-ray | 3.15 | 95/D8 | 1-101 | [»] | |
4WQU | X-ray | 2.80 | AV/CV | 1-101 | [»] | |
4WQY | X-ray | 2.80 | AV/CV | 1-101 | [»] | |
4WR6 | X-ray | 3.05 | 95/D8 | 1-101 | [»] | |
4WRA | X-ray | 3.05 | 95/D8 | 1-101 | [»] | |
4WRO | X-ray | 3.05 | D8 | 1-101 | [»] | |
4WSD | X-ray | 2.95 | 95/D8 | 1-101 | [»] | |
4WSM | X-ray | 3.30 | 95/D8 | 1-101 | [»] | |
4WT1 | X-ray | 3.05 | 95/D8 | 1-101 | [»] | |
4WT8 | X-ray | 3.40 | CU/DU | 1-101 | [»] | |
4WU1 | X-ray | 3.20 | 95/D8 | 1-101 | [»] | |
4WZD | X-ray | 3.10 | 95/D8 | 1-101 | [»] | |
4WZO | X-ray | 3.30 | 95/D8 | 1-101 | [»] | |
4Y4O | X-ray | 2.30 | 1V/2V | 1-101 | [»] | |
4Y4P | X-ray | 2.50 | 1V/2V | 1-101 | [»] | |
4YPB | X-ray | 3.40 | RV/YV | 1-101 | [»] | |
4YZV | X-ray | 3.10 | RV/YV | 1-101 | [»] | |
4Z3S | X-ray | 2.65 | 1V/2V | 1-101 | [»] | |
4Z8C | X-ray | 2.90 | 1V/2V | 1-101 | [»] | |
4ZER | X-ray | 3.10 | 1V/2V | 1-101 | [»] | |
4ZSN | X-ray | 3.60 | RV/YV | 1-101 | [»] | |
5A9Z | electron microscopy | 4.70 | AS | 1-101 | [»] | |
5AA0 | electron microscopy | 5.00 | AS | 1-101 | [»] | |
5CZP | X-ray | 3.30 | RV/YV | 1-101 | [»] | |
5D8B | X-ray | 3.63 | LB/P | 1-101 | [»] | |
5DFE | X-ray | 3.10 | RV/YV | 1-101 | [»] | |
5DOX | X-ray | 3.10 | 1V/2V | 1-101 | [»] | |
5DOY | X-ray | 2.60 | 1V/2V | 1-101 | [»] | |
5E7K | X-ray | 3.20 | 95/D8 | 1-101 | [»] | |
5E81 | X-ray | 2.95 | 95/D8 | 1-101 | [»] | |
5EL4 | X-ray | 3.15 | 95/D8 | 1-101 | [»] | |
5EL5 | X-ray | 3.15 | 95/D8 | 1-101 | [»] | |
5EL6 | X-ray | 3.10 | 95/D8 | 1-101 | [»] | |
5EL7 | X-ray | 3.15 | 95/D8 | 1-101 | [»] | |
5F8K | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
5FDU | X-ray | 2.90 | 1V/2V | 1-101 | [»] | |
5FDV | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
5HAU | X-ray | 3.00 | 1T/2T | 1-101 | [»] | |
5HCP | X-ray | 2.89 | 1V/2V | 1-101 | [»] | |
5HCQ | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
5HCR | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
5HD1 | X-ray | 2.70 | 1V/2V | 1-101 | [»] | |
5IB7 | X-ray | 2.99 | 95/D8 | 1-101 | [»] | |
5IB8 | X-ray | 3.13 | 95/D8 | 1-101 | [»] | |
5IBB | X-ray | 2.96 | 95/D8 | 1-101 | [»] | |
5IMQ | electron microscopy | 3.80 | n | 1-101 | [»] | |
5IMR | electron microscopy | - | n | 1-101 | [»] | |
5J30 | X-ray | 3.20 | RV/YV | 1-101 | [»] | |
5J3C | X-ray | 3.04 | RV/YV | 1-101 | [»] | |
5J4B | X-ray | 2.60 | 1V/2V | 1-101 | [»] | |
5J4C | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
5J8B | X-ray | 2.60 | V | 1-101 | [»] | |
5NDJ | X-ray | 3.15 | 95/D8 | 1-101 | [»] | |
5NDK | X-ray | 2.95 | 95/D8 | 1-101 | [»] | |
5OT7 | electron microscopy | 3.80 | w | 1-101 | [»] | |
5UQ7 | electron microscopy | 3.50 | V | 1-101 | [»] | |
5UQ8 | electron microscopy | 3.20 | V | 1-101 | [»] | |
5VP2 | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
5VPO | X-ray | 3.34 | RV/YV | 1-101 | [»] | |
5VPP | X-ray | 3.90 | RV/YV | 1-101 | [»] | |
5W4K | X-ray | 2.70 | 1V/2V | 1-101 | [»] | |
5WIS | X-ray | 2.70 | 1V/2V | 1-101 | [»] | |
5WIT | X-ray | 2.60 | 1V/2V | 1-101 | [»] | |
5ZLU | electron microscopy | 3.60 | o | 1-101 | [»] | |
6BUW | X-ray | 3.50 | RV/YV | 1-101 | [»] | |
6BZ6 | X-ray | 3.18 | RV/YV | 1-101 | [»] | |
6BZ7 | X-ray | 3.68 | RV/YV | 1-101 | [»] | |
6BZ8 | X-ray | 3.74 | RV/YV | 1-101 | [»] | |
6CAE | X-ray | 2.60 | 1V/2V | 1-101 | [»] | |
6CFJ | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
6CFK | X-ray | 2.70 | 1V/2V | 1-101 | [»] | |
6CFL | X-ray | 2.60 | 1V/2V | 1-101 | [»] | |
6CZR | X-ray | 3.14 | 1V/2V | 1-101 | [»] | |
6FKR | X-ray | 3.20 | 1V/2V | 1-101 | [»] | |
6GSJ | X-ray | 2.96 | 95/D8 | 1-101 | [»] | |
6GSK | X-ray | 3.36 | 95/D8 | 1-101 | [»] | |
6GSL | X-ray | 3.16 | 95/D8 | 1-101 | [»] | |
6GZQ | electron microscopy | 3.28 | Q1 | 1-101 | [»] | |
6GZX | electron microscopy | 4.57 | Q1/Q2 | 1-101 | [»] | |
6GZZ | electron microscopy | 4.13 | Q1/Q2 | 1-101 | [»] | |
6ND5 | X-ray | 2.60 | 1V/2V | 1-101 | [»] | |
6ND6 | X-ray | 2.85 | 1V/2V | 1-101 | [»] | |
6NDK | X-ray | 3.64 | RV/YV | 1-101 | [»] | |
6NSH | X-ray | 3.40 | RV/YV | 1-101 | [»] | |
6NTA | X-ray | 3.10 | RV/YV | 1-101 | [»] | |
6NUO | X-ray | 3.20 | RV/YV | 1-101 | [»] | |
6NWY | X-ray | 3.50 | RV/YV | 1-101 | [»] | |
6O3M | X-ray | 3.97 | RV/YV | 1-101 | [»] | |
6O97 | X-ray | 2.75 | 1V/2V | 1-101 | [»] | |
6OF1 | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
6OF6 | X-ray | 3.20 | RV/YV | 1-101 | [»] | |
6OJ2 | X-ray | 3.20 | RV/YV | 1-101 | [»] | |
6OPE | X-ray | 3.10 | RV/YV | 1-101 | [»] | |
6ORD | X-ray | 3.10 | RV/YV | 1-101 | [»] | |
6OSI | X-ray | 4.14 | RV/YV | 1-101 | [»] | |
6OTR | X-ray | 3.12 | RV/YV | 1-101 | [»] | |
6OXA | X-ray | 3.25 | RV/YV | 1-101 | [»] | |
6OXI | X-ray | 3.50 | RV/YV | 1-101 | [»] | |
6Q95 | electron microscopy | 3.70 | R | 1-101 | [»] | |
6QNQ | X-ray | 3.50 | 95/D8 | 1-101 | [»] | |
6QNR | X-ray | 3.10 | 95/D8 | 1-101 | [»] | |
6UCQ | X-ray | 3.50 | 1V/2V | 1-101 | [»] | |
6UO1 | X-ray | 2.95 | 1V/2V | 1-101 | [»] | |
6XHV | X-ray | 2.40 | 1V/2V | 1-101 | [»] | |
6XHW | X-ray | 2.50 | 1V/2V | 1-101 | [»] | |
6XHX | X-ray | 2.55 | 1V/2V | 1-101 | [»] | |
6XHY | X-ray | 2.60 | 1V/2V | 1-101 | [»] | |
6XQD | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
6XQE | X-ray | 3.00 | 1V/2V | 1-101 | [»] | |
7JQL | X-ray | 3.00 | 1V/2V | 1-101 | [»] | |
7JQM | X-ray | 3.05 | 1V/2V | 1-101 | [»] | |
7LH5 | X-ray | 3.27 | BV/DV | 1-101 | [»] | |
7MD7 | X-ray | 2.80 | 1V/2V | 1-101 | [»] | |
7RQ8 | X-ray | 2.50 | 1V/2V | 1-101 | [»] | |
7RQ9 | X-ray | 2.60 | 1V/2V | 1-101 | [»] | |
SMRi | P60492 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
IntActi | P60492, 7 interactors |
STRINGi | 300852.55773165 |
Genome annotation databases
EnsemblBacteriai | BAD71606; BAD71606; BAD71606 |
GeneIDi | 3169471 |
KEGGi | ttj:TTHA1783 |
PATRICi | fig|300852.9.peg.1753 |
Phylogenomic databases
eggNOGi | COG0261, Bacteria |
HOGENOMi | CLU_061463_3_2_0 |
OMAi | HRQEITR |
PhylomeDBi | P60492 |
Miscellaneous databases
EvolutionaryTracei | P60492 |
Family and domain databases
HAMAPi | MF_01363, Ribosomal_L21, 1 hit |
InterProi | View protein in InterPro IPR036164, L21-like_sf IPR028909, L21p-like IPR001787, Ribosomal_L21 |
PANTHERi | PTHR21349, PTHR21349, 1 hit |
Pfami | View protein in Pfam PF00829, Ribosomal_L21p, 1 hit |
SUPFAMi | SSF141091, SSF141091, 1 hit |
TIGRFAMsi | TIGR00061, L21, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | RL21_THET8 | |
Accessioni | P60492Primary (citable) accession number: P60492 Secondary accession number(s): Q5SHE7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | March 1, 2004 |
Last sequence update: | March 29, 2005 | |
Last modified: | February 23, 2022 | |
This is version 144 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families