UniProtKB - P60489 (RL16_THET8)
Protein
50S ribosomal protein L16
Gene
rplP
Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Functioni
This protein binds directly to 23S rRNA. Interacts with the A site tRNA.
GO - Molecular functioni
- rRNA binding Source: UniProtKB-UniRule
- structural constituent of ribosome Source: InterPro
- tRNA binding Source: UniProtKB-KW
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L16 |
Gene namesi | Name:rplP Ordered Locus Names:TTHA1685 |
Organismi | Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) |
Taxonomic identifieri | 300852 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000062237 | 1 – 141 | 50S ribosomal protein L16Add BLAST | 141 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit.
Protein-protein interaction databases
IntActi | P60489, 1 interactor |
STRINGi | 300852.55773067 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
BMRBi | P60489 |
SMRi | P60489 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | P60489 |
Family & Domainsi
Sequence similaritiesi
Belongs to the universal ribosomal protein uL16 family.Curated
Phylogenomic databases
eggNOGi | COG0197, Bacteria |
HOGENOMi | CLU_078858_2_1_0 |
OMAi | KGAVEYW |
PhylomeDBi | P60489 |
Family and domain databases
CDDi | cd01433, Ribosomal_L16_L10e, 1 hit |
Gene3Di | 3.90.1170.10, 1 hit |
HAMAPi | MF_01342, Ribosomal_L16, 1 hit |
InterProi | View protein in InterPro IPR016180, Ribosomal_L10e/L16 IPR036920, Ribosomal_L10e/L16_sf IPR000114, Ribosomal_L16 |
PANTHERi | PTHR12220, PTHR12220, 1 hit |
Pfami | View protein in Pfam PF00252, Ribosomal_L16, 1 hit |
PRINTSi | PR00060, RIBOSOMALL16 |
SUPFAMi | SSF54686, SSF54686, 1 hit |
TIGRFAMsi | TIGR01164, rplP_bact, 1 hit |
i Sequence
Sequence statusi: Complete.
P60489-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MLMPRRMKYR KQQRGRLKGA TKGGDYVAFG DYGLVALEPA WITAQQIEAA
60 70 80 90 100
RVAMVRHFRR GGKIFIRIFP DKPYTKKPLE VRMGKGKGNV EGYVAVVKPG
110 120 130 140
RVMFEVAGVT EEQAMEALRI AGHKLPIKTK IVRRDAYDEA Q
Mass spectrometryi
Molecular mass is 15962 Da. Determined by MALDI. 1 Publication
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP008226 Genomic DNA Translation: BAD71508.1 |
RefSeqi | WP_011228846.1, NC_006461.1 YP_144951.1, NC_006461.1 |
Genome annotation databases
EnsemblBacteriai | BAD71508; BAD71508; BAD71508 |
GeneIDi | 3168285 |
KEGGi | ttj:TTHA1685 |
PATRICi | fig|300852.9.peg.1655 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AP008226 Genomic DNA Translation: BAD71508.1 |
RefSeqi | WP_011228846.1, NC_006461.1 YP_144951.1, NC_006461.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1VVJ | X-ray | 3.44 | RQ/YQ | 1-141 | [»] | |
1VY4 | X-ray | 2.60 | BQ/DQ | 1-141 | [»] | |
1VY5 | X-ray | 2.55 | BQ/DQ | 1-141 | [»] | |
1VY6 | X-ray | 2.90 | BQ/DQ | 1-141 | [»] | |
1VY7 | X-ray | 2.80 | BQ/DQ | 1-141 | [»] | |
1WKI | NMR | - | A | 1-141 | [»] | |
4L47 | X-ray | 3.22 | RQ/YQ | 1-141 | [»] | |
4L71 | X-ray | 3.90 | RQ/YQ | 1-141 | [»] | |
4LEL | X-ray | 3.90 | RQ/YQ | 1-141 | [»] | |
4LFZ | X-ray | 3.92 | RQ/YQ | 1-141 | [»] | |
4LNT | X-ray | 2.94 | RQ/YQ | 1-141 | [»] | |
4LSK | X-ray | 3.48 | RQ/YQ | 1-141 | [»] | |
4LT8 | X-ray | 3.14 | RQ/YQ | 1-141 | [»] | |
4P6F | X-ray | 3.60 | RQ/YQ | 1-141 | [»] | |
4P70 | X-ray | 3.68 | RQ/YQ | 1-141 | [»] | |
4TUA | X-ray | 3.60 | RQ/YQ | 1-141 | [»] | |
4TUB | X-ray | 3.60 | RQ/YQ | 1-141 | [»] | |
4TUC | X-ray | 3.60 | RQ/YQ | 1-141 | [»] | |
4TUD | X-ray | 3.60 | RQ/YQ | 1-141 | [»] | |
4TUE | X-ray | 3.50 | RQ/YQ | 1-141 | [»] | |
4V42 | X-ray | 5.50 | P | 1-141 | [»] | |
4V4P | X-ray | 5.50 | P | 1-141 | [»] | |
4V4X | X-ray | 5.00 | BP | 1-141 | [»] | |
4V4Y | X-ray | 5.50 | BP | 1-140 | [»] | |
4V4Z | X-ray | 4.51 | BP | 1-140 | [»] | |
4V51 | X-ray | 2.80 | BQ/DQ | 1-141 | [»] | |
4V5A | X-ray | 3.50 | BQ/DQ | 1-141 | [»] | |
4V5C | X-ray | 3.30 | BQ/DQ | 1-141 | [»] | |
4V5D | X-ray | 3.50 | BQ/DQ | 1-141 | [»] | |
4V5E | X-ray | 3.45 | BQ/DQ | 1-141 | [»] | |
4V5F | X-ray | 3.60 | BQ/DQ | 1-141 | [»] | |
4V5G | X-ray | 3.60 | BQ/DQ | 1-141 | [»] | |
4V5J | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4V5K | X-ray | 3.20 | BQ/DQ | 1-141 | [»] | |
4V5L | X-ray | 3.10 | BQ | 1-141 | [»] | |
4V5M | electron microscopy | 7.80 | BQ | 1-141 | [»] | |
4V5N | electron microscopy | 7.60 | BQ | 1-141 | [»] | |
4V5P | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4V5Q | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4V5R | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4V5S | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4V68 | electron microscopy | 6.40 | BQ | 6-141 | [»] | |
4V6A | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4V6F | X-ray | 3.10 | AP/DP | 1-141 | [»] | |
4V6G | X-ray | 3.50 | BP/DP | 1-141 | [»] | |
4V7J | X-ray | 3.30 | AQ/BQ | 1-141 | [»] | |
4V7K | X-ray | 3.60 | AQ/BQ | 1-141 | [»] | |
4V7L | X-ray | 3.00 | BQ/DQ | 1-141 | [»] | |
4V7M | X-ray | 3.45 | BQ/DQ | 1-141 | [»] | |
4V7W | X-ray | 3.00 | BQ/DQ | 1-141 | [»] | |
4V7X | X-ray | 3.00 | BQ/DQ | 1-141 | [»] | |
4V7Y | X-ray | 3.00 | BQ/DQ | 1-141 | [»] | |
4V7Z | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4V87 | X-ray | 3.10 | AP/DP | 1-141 | [»] | |
4V8A | X-ray | 3.20 | AQ/BQ | 1-141 | [»] | |
4V8B | X-ray | 3.00 | BP/DP | 1-141 | [»] | |
4V8C | X-ray | 3.30 | AP/BP | 1-141 | [»] | |
4V8D | X-ray | 3.00 | BP/DP | 1-141 | [»] | |
4V8E | X-ray | 3.30 | AP/CP | 1-141 | [»] | |
4V8F | X-ray | 3.30 | AP/DP | 1-141 | [»] | |
4V8G | X-ray | 3.00 | BQ/DQ | 1-141 | [»] | |
4V8H | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4V8I | X-ray | 2.70 | BQ/DQ | 1-141 | [»] | |
4V8J | X-ray | 3.90 | BQ/DQ | 1-141 | [»] | |
4V8N | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4V8O | X-ray | 3.80 | BQ | 1-141 | [»] | |
4V8Q | X-ray | 3.10 | AQ | 1-141 | [»] | |
4V8U | X-ray | 3.70 | BQ/DQ | 1-141 | [»] | |
4V8X | X-ray | 3.35 | BQ/DQ | 1-141 | [»] | |
4V90 | X-ray | 2.95 | BQ | 1-141 | [»] | |
4V95 | X-ray | 3.20 | BQ/DQ | 1-141 | [»] | |
4V97 | X-ray | 3.52 | BQ/DQ | 1-141 | [»] | |
4V9A | X-ray | 3.30 | BP/DP | 1-141 | [»] | |
4V9B | X-ray | 3.10 | BP/DP | 1-141 | [»] | |
4V9H | X-ray | 2.86 | BQ | 1-141 | [»] | |
4V9I | X-ray | 3.30 | BQ/DQ | 1-141 | [»] | |
4V9R | X-ray | 3.00 | BQ/DQ | 1-141 | [»] | |
4V9S | X-ray | 3.10 | BQ/DQ | 1-141 | [»] | |
4W2E | X-ray | 2.90 | Q | 1-141 | [»] | |
4W2F | X-ray | 2.40 | BQ/DQ | 1-141 | [»] | |
4W2G | X-ray | 2.55 | BQ/DQ | 1-141 | [»] | |
4W2H | X-ray | 2.70 | BQ/DQ | 1-141 | [»] | |
4W2I | X-ray | 2.70 | BQ/DQ | 1-141 | [»] | |
4W4G | X-ray | 3.30 | RQ/YQ | 1-141 | [»] | |
4WPO | X-ray | 2.80 | AQ/CQ | 1-141 | [»] | |
4WQ1 | X-ray | 3.10 | 45/88 | 1-141 | [»] | |
4WQF | X-ray | 2.80 | AQ/CQ | 1-141 | [»] | |
4WQR | X-ray | 3.15 | 45/88 | 1-141 | [»] | |
4WQU | X-ray | 2.80 | AQ/CQ | 1-141 | [»] | |
4WQY | X-ray | 2.80 | AQ/CQ | 1-141 | [»] | |
4WR6 | X-ray | 3.05 | 45/88 | 1-141 | [»] | |
4WRA | X-ray | 3.05 | 45/88 | 1-141 | [»] | |
4WRO | X-ray | 3.05 | 88 | 1-141 | [»] | |
4WSD | X-ray | 2.95 | 45/88 | 1-141 | [»] | |
4WSM | X-ray | 3.30 | 45/88 | 1-141 | [»] | |
4WT1 | X-ray | 3.05 | 45/88 | 1-141 | [»] | |
4WT8 | X-ray | 3.40 | CP/DP | 1-141 | [»] | |
4WU1 | X-ray | 3.20 | 45/88 | 1-141 | [»] | |
4WZD | X-ray | 3.10 | 45/88 | 1-141 | [»] | |
4WZO | X-ray | 3.30 | 45/88 | 1-141 | [»] | |
4Y4O | X-ray | 2.30 | 1Q/2Q | 1-141 | [»] | |
4Y4P | X-ray | 2.50 | 1Q/2Q | 1-141 | [»] | |
4YPB | X-ray | 3.40 | RQ/YQ | 1-141 | [»] | |
4YZV | X-ray | 3.10 | RQ/YQ | 1-141 | [»] | |
4Z3S | X-ray | 2.65 | 1Q/2Q | 1-141 | [»] | |
4Z8C | X-ray | 2.90 | 1Q/2Q | 1-141 | [»] | |
4ZER | X-ray | 3.10 | 1Q/2Q | 1-141 | [»] | |
4ZSN | X-ray | 3.60 | RQ/YQ | 1-141 | [»] | |
5A9Z | electron microscopy | 4.70 | AN | 6-141 | [»] | |
5AA0 | electron microscopy | 5.00 | AN | 6-141 | [»] | |
5CZP | X-ray | 3.30 | RQ/YQ | 1-141 | [»] | |
5D8B | X-ray | 3.63 | GB/K | 1-141 | [»] | |
5DFE | X-ray | 3.10 | RQ/YQ | 1-141 | [»] | |
5DOX | X-ray | 3.10 | 1Q/2Q | 1-141 | [»] | |
5DOY | X-ray | 2.60 | 1Q/2Q | 1-141 | [»] | |
5E7K | X-ray | 3.20 | 45/88 | 1-141 | [»] | |
5E81 | X-ray | 2.95 | 45/88 | 1-141 | [»] | |
5EL4 | X-ray | 3.15 | 45/88 | 1-141 | [»] | |
5EL5 | X-ray | 3.15 | 45/88 | 1-141 | [»] | |
5EL6 | X-ray | 3.10 | 45/88 | 1-141 | [»] | |
5EL7 | X-ray | 3.15 | 45/88 | 1-141 | [»] | |
5F8K | X-ray | 2.80 | 1Q/2Q | 1-141 | [»] | |
5FDU | X-ray | 2.90 | 1Q/2Q | 1-141 | [»] | |
5FDV | X-ray | 2.80 | 1Q/2Q | 1-141 | [»] | |
5HAU | X-ray | 3.00 | 1O/2O | 1-141 | [»] | |
5HCP | X-ray | 2.89 | 1Q/2Q | 1-141 | [»] | |
5HCQ | X-ray | 2.80 | 1Q/2Q | 1-141 | [»] | |
5HCR | X-ray | 2.80 | 1Q/2Q | 1-141 | [»] | |
5HD1 | X-ray | 2.70 | 1Q/2Q | 1-141 | [»] | |
5IB7 | X-ray | 2.99 | 45/88 | 1-141 | [»] | |
5IB8 | X-ray | 3.13 | 45/88 | 1-141 | [»] | |
5IBB | X-ray | 2.96 | 45/88 | 1-141 | [»] | |
5IMQ | electron microscopy | 3.80 | i | 1-141 | [»] | |
5IMR | electron microscopy | - | i | 1-141 | [»] | |
5J30 | X-ray | 3.20 | RQ/YQ | 1-141 | [»] | |
5J3C | X-ray | 3.04 | RQ/YQ | 1-141 | [»] | |
5J4B | X-ray | 2.60 | 1Q/2Q | 1-141 | [»] | |
5J4C | X-ray | 2.80 | 1Q/2Q | 1-141 | [»] | |
5J8B | X-ray | 2.60 | Q | 1-141 | [»] | |
5NDJ | X-ray | 3.15 | 45/88 | 1-141 | [»] | |
5NDK | X-ray | 2.95 | 45/88 | 1-141 | [»] | |
5OT7 | electron microscopy | 3.80 | r | 1-141 | [»] | |
5UQ7 | electron microscopy | 3.50 | Q | 1-141 | [»] | |
5UQ8 | electron microscopy | 3.20 | Q | 1-141 | [»] | |
5VP2 | X-ray | 2.80 | 1Q/2Q | 1-141 | [»] | |
5VPO | X-ray | 3.34 | RQ/YQ | 1-141 | [»] | |
5VPP | X-ray | 3.90 | RQ/YQ | 1-141 | [»] | |
5W4K | X-ray | 2.70 | 1Q/2Q | 1-141 | [»] | |
5WIS | X-ray | 2.70 | 1Q/2Q | 1-141 | [»] | |
5WIT | X-ray | 2.60 | 1Q/2Q | 1-141 | [»] | |
5ZLU | electron microscopy | 3.60 | j | 1-141 | [»] | |
6BUW | X-ray | 3.50 | RQ/YQ | 1-141 | [»] | |
6BZ6 | X-ray | 3.18 | RQ/YQ | 1-141 | [»] | |
6BZ7 | X-ray | 3.68 | RQ/YQ | 1-141 | [»] | |
6BZ8 | X-ray | 3.74 | RQ/YQ | 1-141 | [»] | |
6C5L | X-ray | 3.20 | BQ/DQ | 1-141 | [»] | |
6CAE | X-ray | 2.60 | 1Q/2Q | 1-141 | [»] | |
6CFJ | X-ray | 2.80 | 1Q/2Q | 1-141 | [»] | |
6CFK | X-ray | 2.70 | 1Q/2Q | 1-141 | [»] | |
6CFL | X-ray | 2.60 | 1Q/2Q | 1-141 | [»] | |
6CZR | X-ray | 3.14 | 1Q/2Q | 1-141 | [»] | |
6FKR | X-ray | 3.20 | 1Q/2Q | 1-141 | [»] | |
6GSJ | X-ray | 2.96 | 45/88 | 1-141 | [»] | |
6GSK | X-ray | 3.36 | 45/88 | 1-141 | [»] | |
6GSL | X-ray | 3.16 | 45/88 | 1-141 | [»] | |
6GZQ | electron microscopy | 3.28 | L1 | 1-141 | [»] | |
6GZX | electron microscopy | 4.57 | L1/L2 | 1-141 | [»] | |
6GZZ | electron microscopy | 4.13 | L1/L2 | 1-141 | [»] | |
6ND5 | X-ray | 2.60 | 1Q/2Q | 1-141 | [»] | |
6ND6 | X-ray | 2.85 | 1Q/2Q | 1-141 | [»] | |
6NDK | X-ray | 3.64 | RQ/YQ | 1-141 | [»] | |
6O97 | X-ray | 2.75 | 1Q/2Q | 1-141 | [»] | |
6OF1 | X-ray | 2.80 | 1Q/2Q | 1-141 | [»] | |
6OF6 | X-ray | 3.20 | RQ/YQ | 1-141 | [»] | |
6OJ2 | X-ray | 3.20 | RQ/YQ | 1-141 | [»] | |
6OPE | X-ray | 3.10 | RQ/YQ | 1-141 | [»] | |
6ORD | X-ray | 3.10 | RQ/YQ | 1-141 | [»] | |
6OTR | X-ray | 3.12 | RQ/YQ | 1-141 | [»] | |
6OXA | X-ray | 3.25 | RQ/YQ | 1-141 | [»] | |
6OXI | X-ray | 3.50 | RQ/YQ | 1-141 | [»] | |
6Q95 | electron microscopy | 3.70 | M | 6-141 | [»] | |
6QNQ | X-ray | 3.50 | 45/88 | 1-141 | [»] | |
6QNR | X-ray | 3.10 | 45/88 | 1-141 | [»] | |
6UCQ | X-ray | 3.50 | 1Q/2Q | 1-141 | [»] | |
6UO1 | X-ray | 2.95 | 1Q/2Q | 1-141 | [»] | |
6XQD | X-ray | 2.80 | 1Q/2Q | 1-141 | [»] | |
6XQE | X-ray | 3.00 | 1Q/2Q | 1-141 | [»] | |
7JQL | X-ray | 3.00 | 1Q/2Q | 1-141 | [»] | |
7JQM | X-ray | 3.05 | 1Q/2Q | 1-141 | [»] | |
BMRBi | P60489 | |||||
SMRi | P60489 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
IntActi | P60489, 1 interactor |
STRINGi | 300852.55773067 |
Genome annotation databases
EnsemblBacteriai | BAD71508; BAD71508; BAD71508 |
GeneIDi | 3168285 |
KEGGi | ttj:TTHA1685 |
PATRICi | fig|300852.9.peg.1655 |
Phylogenomic databases
eggNOGi | COG0197, Bacteria |
HOGENOMi | CLU_078858_2_1_0 |
OMAi | KGAVEYW |
PhylomeDBi | P60489 |
Miscellaneous databases
EvolutionaryTracei | P60489 |
Family and domain databases
CDDi | cd01433, Ribosomal_L16_L10e, 1 hit |
Gene3Di | 3.90.1170.10, 1 hit |
HAMAPi | MF_01342, Ribosomal_L16, 1 hit |
InterProi | View protein in InterPro IPR016180, Ribosomal_L10e/L16 IPR036920, Ribosomal_L10e/L16_sf IPR000114, Ribosomal_L16 |
PANTHERi | PTHR12220, PTHR12220, 1 hit |
Pfami | View protein in Pfam PF00252, Ribosomal_L16, 1 hit |
PRINTSi | PR00060, RIBOSOMALL16 |
SUPFAMi | SSF54686, SSF54686, 1 hit |
TIGRFAMsi | TIGR01164, rplP_bact, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL16_THET8 | |
Accessioni | P60489Primary (citable) accession number: P60489 Secondary accession number(s): Q5SHP5 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | March 1, 2004 |
Last sequence update: | March 29, 2005 | |
Last modified: | December 2, 2020 | |
This is version 148 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families - Ribosomal proteins
Ribosomal proteins families and list of entries