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UniProtKB - P60422 (RL2_ECOLI)

Protein

50S ribosomal protein L2

Gene

rplB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

One of the primary rRNA binding proteins (PubMed:3298242). Located near the base of the L1 stalk, it is probably also mobile. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation (PubMed:8722025). It has been suggested to have peptidyltransferase activity; this is highly controversial.7 Publications
In the E.coli 70S ribosome in the initiation state it has been modeled to make several contacts with the 16S rRNA (forming bridge B7b, PubMed:12809609); these contacts are broken in the model with bound EF-G.1 Publication

Miscellaneous

This protein can be partially replaced in vivo by its H.marismortui (HmaL2) or human (L8, from the 60S cytoplasmic ribosome) homolog.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • rRNA binding Source: UniProtKB-UniRule
  • structural constituent of ribosome Source: CAFA
  • transferase activity Source: InterPro
  • zinc ion binding Source: EcoliWiki
View the complete GO annotation on QuickGO ...

GO - Biological processi

  • cytoplasmic translation Source: GO_Central
  • ribosomal large subunit assembly Source: CAFA
View the complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		EcoCyc:EG10865-MONOMER
MetaCyc:EG10865-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
50S ribosomal protein L2
Alternative name(s):
Large ribosomal subunit protein uL21 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:rplB
Ordered Locus Names:b3317, JW3279
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiEscherichia coli (strain K12)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri83333 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000318 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

Escherichia coli strain K12 genome database

More...EcoGenei		EG10865 rplB

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

GO - Cellular componenti

View the complete GO annotation on QuickGO ...

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi230H → Q: Loss of peptidyltransferase activity in reconstituted ribosomes. No change in rRNA binding or assembly into ribosomes. 1 Publication1

Chemistry databases

ChEMBL database of bioactive drug-like small molecules

More...ChEMBLi		CHEMBL2363121

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section indicates that the initiator methionine is cleaved from the mature protein.<p><a href='/help/init_met' target='_top'>More...</a></p>Initiator methionineiRemoved1 Publication
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001295592 – 27350S ribosomal protein L2Add BLAST272

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei242N6-acetyllysine1 Publication1

Keywords - PTMi

Acetylation

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		P60422

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		P60422

PRoteomics IDEntifications database

More...PRIDEi		P60422

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		P60422

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Part of the 50S ribosomal subunit (Ref. 4, PubMed:7556101, PubMed:11114255, PubMed:10094780, PubMed:10756104, PubMed:12809609, PubMed:16272117, PubMed:25310980, PubMed:24844575, PubMed:27934701, PubMed:27906160, PubMed:27906161). Forms a bridge to the 30S subunit in the 70S ribosome, contacting the 16S rRNA (PubMed:12809609). Interacts weakly with S6 in one of the 3.5 A resolved structures.12 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		852132, 1 interactor

ComplexPortal: manually curated resource of macromolecular complexes

More...ComplexPortali		CPX-1944 DnaA-L2

Database of interacting proteins

More...DIPi		DIP-35747N

Protein interaction database and analysis system

More...IntActi		P60422, 372 interactors

STRING: functional protein association networks

More...STRINGi		316385.ECDH10B_3492

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1273
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...ProteinModelPortali		P60422

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		P60422

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...EvolutionaryTracei		P60422

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the universal ribosomal protein uL2 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG4105CFD Bacteria
COG0090 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000232982

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		P60422

KEGG Orthology (KO)

More...KOi		K02886

Database for complete collections of gene phylogenies

More...PhylomeDBi		P60422

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.30.30.30, 1 hit
4.10.950.10, 1 hit

HAMAP database of protein families

More...HAMAPi		MF_01320_B Ribosomal_L2_B, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR012340 NA-bd_OB-fold
IPR022666 Rbsml_prot_L2_RNA-bd_dom
IPR014722 Rib_L2_dom2
IPR002171 Ribosomal_L2
IPR005880 Ribosomal_L2_bac/org-type
IPR022669 Ribosomal_L2_C
IPR022671 Ribosomal_L2_CS
IPR014726 Ribosomal_L2_dom3
IPR008991 Translation_prot_SH3-like_sf

The PANTHER Classification System

More...PANTHERi		PTHR13691 PTHR13691, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00181 Ribosomal_L2, 1 hit
PF03947 Ribosomal_L2_C, 1 hit

PIRSF; a whole-protein classification database

More...PIRSFi		PIRSF002158 Ribosomal_L2, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM01383 Ribosomal_L2, 1 hit
SM01382 Ribosomal_L2_C, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF50104 SSF50104, 1 hit
SSF50249 SSF50249, 1 hit

TIGRFAMs; a protein family database

More...TIGRFAMsi		TIGR01171 rplB_bact, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS00467 RIBOSOMAL_L2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

P60422-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAVVKCKPTS PGRRHVVKVV NPELHKGKPF APLLEKNSKS GGRNNNGRIT 
        60         70         80         90        100
TRHIGGGHKQ AYRIVDFKRN KDGIPAVVER LEYDPNRSAN IALVLYKDGE 
       110        120        130        140        150
RRYILAPKGL KAGDQIQSGV DAAIKPGNTL PMRNIPVGST VHNVEMKPGK 
       160        170        180        190        200
GGQLARSAGT YVQIVARDGA YVTLRLRSGE MRKVEADCRA TLGEVGNAEH 
       210        220        230        240        250
MLRVLGKAGA ARWRGVRPTV RGTAMNPVDH PHGGGEGRNF GKHPVTPWGV 
       260        270 
QTKGKKTRSN KRTDKFIVRR RSK
Length:273
Mass (Da):29,860
Last modified:January 23, 2007 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i1010BDE8D8C68B9B
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti232 – 235HGGG → GGGH AA sequence (Ref. 4) Curated4

<p>This subsection of the ‘Sequence’ section reports information derived from mass spectrometry experiments done on the entire protein or on biologically active derived peptide(s).<p><a href='/help/mass_spectrometry' target='_top'>More...</a></p>Mass spectrometryi

Molecular mass is 29732.3 Da from positions 2 - 273. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
X02613 Genomic DNA Translation: CAA26463.1
U18997 Genomic DNA Translation: AAA58114.1
U00096 Genomic DNA Translation: AAC76342.1
AP009048 Genomic DNA Translation: BAE77974.1

Protein sequence database of the Protein Information Resource

More...PIRi		E23129 R5EC2

NCBI Reference Sequences

More...RefSeqi		NP_417776.1, NC_000913.3
WP_000301864.1, NZ_LN832404.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		AAC76342; AAC76342; b3317
BAE77974; BAE77974; BAE77974

Database of genes from NCBI RefSeq genomes

More...GeneIDi		29456695
947820

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		ecj:JW3279
eco:b3317

Pathosystems Resource Integration Center (PATRIC)

More...PATRICi		fig|1411691.4.peg.3414

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X02613 Genomic DNA Translation: CAA26463.1
U18997 Genomic DNA Translation: AAA58114.1
U00096 Genomic DNA Translation: AAC76342.1
AP009048 Genomic DNA Translation: BAE77974.1
PIRiE23129 R5EC2
RefSeqiNP_417776.1, NC_000913.3
WP_000301864.1, NZ_LN832404.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2J28electron microscopy8.00C4-270[»]
2RDOelectron microscopy9.10C2-273[»]
3BBXelectron microscopy10.00C1-273[»]
3J5Lelectron microscopy6.60C2-272[»]
3J7Zelectron microscopy3.90C1-273[»]
3J8Gelectron microscopy5.00C1-273[»]
3J9Yelectron microscopy3.90C1-273[»]
3J9Zelectron microscopy3.60LN2-273[»]
3JA1electron microscopy3.60LD2-273[»]
3JBUelectron microscopy3.64c1-273[»]
3JBVelectron microscopy3.32c1-273[»]
3JCDelectron microscopy3.70C1-273[»]
3JCEelectron microscopy3.20C1-273[»]
3JCJelectron microscopy3.70B1-273[»]
3JCNelectron microscopy4.60C1-273[»]
487Delectron microscopy7.50I62-172[»]
4CSUelectron microscopy5.50C2-273[»]
4U1UX-ray2.95BC/DC2-272[»]
4U1VX-ray3.00BC/DC2-272[»]
4U20X-ray2.90BC/DC2-272[»]
4U24X-ray2.90BC/DC2-272[»]
4U25X-ray2.90BC/DC2-272[»]
4U26X-ray2.80BC/DC2-272[»]
4U27X-ray2.80BC/DC2-272[»]
4UY8electron microscopy3.80C2-272[»]
4V47electron microscopy12.30AA2-273[»]
4V48electron microscopy11.50AA2-273[»]
4V4HX-ray3.46BC/DC1-273[»]
4V4QX-ray3.46BC/DC1-273[»]
4V4Velectron microscopy15.00BA39-265[»]
4V4Welectron microscopy15.00BA39-265[»]
4V50X-ray3.22BC/DC2-273[»]
4V52X-ray3.21BC/DC2-273[»]
4V53X-ray3.54BC/DC2-273[»]
4V54X-ray3.30BC/DC2-273[»]
4V55X-ray4.00BC/DC2-273[»]
4V56X-ray3.93BC/DC2-273[»]
4V57X-ray3.50BC/DC2-273[»]
4V5BX-ray3.74AC/CC1-273[»]
4V5Helectron microscopy5.80BC2-272[»]
4V5YX-ray4.45BC/DC2-273[»]
4V64X-ray3.50BC/DC1-273[»]
4V65electron microscopy9.00BN1-270[»]
4V66electron microscopy9.00BN1-270[»]
4V69electron microscopy6.70BC2-272[»]
4V6CX-ray3.19BC/DC1-273[»]
4V6DX-ray3.81BC/DC1-273[»]
4V6EX-ray3.71BC/DC1-273[»]
4V6Kelectron microscopy8.25AD1-273[»]
4V6Lelectron microscopy13.20BD1-273[»]
4V6Melectron microscopy7.10B62-273[»]
4V6Nelectron microscopy12.10AD2-273[»]
4V6Oelectron microscopy14.70BD2-273[»]
4V6Pelectron microscopy13.50BD2-273[»]
4V6Qelectron microscopy11.50BD2-273[»]
4V6Relectron microscopy11.50BD2-273[»]
4V6Selectron microscopy13.10AD2-273[»]
4V6Telectron microscopy8.30BC2-272[»]
4V6Velectron microscopy9.80BD2-273[»]
4V6Yelectron microscopy12.00BC1-272[»]
4V6Zelectron microscopy12.00BC1-272[»]
4V70electron microscopy17.00BC1-272[»]
4V71electron microscopy20.00BC1-272[»]
4V72electron microscopy13.00BC1-272[»]
4V73electron microscopy15.00BC1-272[»]
4V74electron microscopy17.00BC1-272[»]
4V75electron microscopy12.00BC1-272[»]
4V76electron microscopy17.00BC1-272[»]
4V77electron microscopy17.00BC1-272[»]
4V78electron microscopy20.00BC1-272[»]
4V79electron microscopy15.00BC1-272[»]
4V7Aelectron microscopy9.00BC1-272[»]
4V7Belectron microscopy6.80BC1-273[»]
4V7Celectron microscopy7.60BD2-273[»]
4V7Delectron microscopy7.60AD2-273[»]
4V7Ielectron microscopy9.60A61-273[»]
4V7SX-ray3.25BC/DC2-272[»]
4V7TX-ray3.19BC/DC2-272[»]
4V7UX-ray3.10BC/DC2-272[»]
4V7VX-ray3.29BC/DC2-272[»]
4V85X-ray3.20C1-273[»]
4V89X-ray3.70BC1-273[»]
4V9CX-ray3.30BC/DC1-273[»]
4V9DX-ray3.00CC/DC2-272[»]
4V9OX-ray2.90AC/CC/EC/GC1-273[»]
4V9PX-ray2.90AC/CC/EC/GC1-273[»]
4WF1X-ray3.09BC/DC2-272[»]
4WOIX-ray3.00BC/CC1-273[»]
4WWWX-ray3.10RC/YC2-272[»]
4YBBX-ray2.10CC/DC2-272[»]
5ADYelectron microscopy4.50C1-273[»]
5AFIelectron microscopy2.90C1-273[»]
5AKAelectron microscopy5.70C1-273[»]
5GADelectron microscopy3.70C1-273[»]
5GAEelectron microscopy3.33C1-273[»]
5GAFelectron microscopy4.30C2-272[»]
5GAGelectron microscopy3.80C1-273[»]
5GAHelectron microscopy3.80C1-273[»]
5H5Uelectron microscopy3.00C2-273[»]
5IQRelectron microscopy3.00B1-273[»]
5IT8X-ray3.12CC/DC2-272[»]
5J5BX-ray2.80CC/DC2-272[»]
5J7LX-ray3.00CC/DC2-272[»]
5J88X-ray3.32CC/DC2-273[»]
5J8AX-ray3.10CC/DC2-273[»]
5J91X-ray2.96CC/DC2-273[»]
5JC9X-ray3.03CC/DC2-272[»]
5JTEelectron microscopy3.60BC1-273[»]
5JU8electron microscopy3.60BC1-273[»]
5KCRelectron microscopy3.601D1-273[»]
5KCSelectron microscopy3.901D1-273[»]
5KPSelectron microscopy3.90B1-273[»]
5KPVelectron microscopy4.10A1-273[»]
5KPWelectron microscopy3.90A1-273[»]
5KPXelectron microscopy3.90A1-273[»]
5L3Pelectron microscopy3.70D1-273[»]
5LZAelectron microscopy3.60C2-272[»]
5LZBelectron microscopy5.30C2-272[»]
5LZCelectron microscopy4.80C2-272[»]
5LZDelectron microscopy3.40C2-272[»]
5LZEelectron microscopy3.50C2-272[»]
5LZFelectron microscopy4.60C2-272[»]
5MDVelectron microscopy2.97B1-273[»]
5MDWelectron microscopy3.06B1-273[»]
5MDYelectron microscopy3.35B1-273[»]
5MDZelectron microscopy3.10B1-273[»]
5MGPelectron microscopy3.10C2-272[»]
5NCOelectron microscopy4.80C2-272[»]
5NP6electron microscopy3.60a2-272[»]
5NWYelectron microscopy2.93P1-273[»]
5O2Relectron microscopy3.40C2-272[»]
5U4Ielectron microscopy3.50C1-273[»]
5U9Felectron microscopy3.20041-273[»]
5U9Gelectron microscopy3.20041-273[»]
5UYKelectron microscopy3.90042-272[»]
5UYLelectron microscopy3.60042-272[»]
5UYMelectron microscopy3.20042-272[»]
5UYNelectron microscopy4.00042-272[»]
5UYPelectron microscopy3.90042-272[»]
5UYQelectron microscopy3.80042-272[»]
5WDTelectron microscopy3.00C2-272[»]
5WE4electron microscopy3.10C2-272[»]
5WE6electron microscopy3.40C2-272[»]
5WFKelectron microscopy3.40C2-272[»]
6BU8electron microscopy3.50042-272[»]
6C4Helectron microscopy3.10C1-273[»]
6ENFelectron microscopy3.20C2-272[»]
6ENJelectron microscopy3.70C2-272[»]
6ENUelectron microscopy3.10C2-272[»]
6GBZelectron microscopy3.80C2-272[»]
6GC0electron microscopy3.80C2-272[»]
6GC4electron microscopy4.30C2-272[»]
6GC6electron microscopy4.30C2-224[»]
6GC8electron microscopy3.80C2-272[»]
6GWTelectron microscopy3.80C2-272[»]
6GXMelectron microscopy3.80C2-272[»]
6GXNelectron microscopy3.90C2-272[»]
6GXOelectron microscopy3.90C2-272[»]
6GXPelectron microscopy4.40C2-272[»]
6H4Nelectron microscopy3.00C2-272[»]
6H58electron microscopy7.90C/CC2-272[»]
ProteinModelPortaliP60422
SMRiP60422
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi852132, 1 interactor
ComplexPortaliCPX-1944 DnaA-L2
DIPiDIP-35747N
IntActiP60422, 372 interactors
STRINGi316385.ECDH10B_3492

Chemistry databases

ChEMBLiCHEMBL2363121

PTM databases

iPTMnetiP60422

Proteomic databases

EPDiP60422
PaxDbiP60422
PRIDEiP60422

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76342; AAC76342; b3317
BAE77974; BAE77974; BAE77974
GeneIDi29456695
947820
KEGGiecj:JW3279
eco:b3317
PATRICifig|1411691.4.peg.3414

Organism-specific databases

EchoBASE - an integrated post-genomic database for E. coli

More...EchoBASEi		EB0858
EcoGeneiEG10865 rplB

Phylogenomic databases

eggNOGiENOG4105CFD Bacteria
COG0090 LUCA
HOGENOMiHOG000232982
InParanoidiP60422
KOiK02886
PhylomeDBiP60422

Enzyme and pathway databases

BioCyciEcoCyc:EG10865-MONOMER
MetaCyc:EG10865-MONOMER

Miscellaneous databases

EvolutionaryTraceiP60422

Protein Ontology

More...PROi		PR:P60422

Family and domain databases

Gene3Di2.30.30.30, 1 hit
4.10.950.10, 1 hit
HAMAPiMF_01320_B Ribosomal_L2_B, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR022666 Rbsml_prot_L2_RNA-bd_dom
IPR014722 Rib_L2_dom2
IPR002171 Ribosomal_L2
IPR005880 Ribosomal_L2_bac/org-type
IPR022669 Ribosomal_L2_C
IPR022671 Ribosomal_L2_CS
IPR014726 Ribosomal_L2_dom3
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR13691 PTHR13691, 1 hit
PfamiView protein in Pfam
PF00181 Ribosomal_L2, 1 hit
PF03947 Ribosomal_L2_C, 1 hit
PIRSFiPIRSF002158 Ribosomal_L2, 1 hit
SMARTiView protein in SMART
SM01383 Ribosomal_L2, 1 hit
SM01382 Ribosomal_L2_C, 1 hit
SUPFAMiSSF50104 SSF50104, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR01171 rplB_bact, 1 hit
PROSITEiView protein in PROSITE
PS00467 RIBOSOMAL_L2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRL2_ECOLI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P60422
Secondary accession number(s): P02387, Q2M6Y2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: January 23, 2007
Last modified: November 7, 2018
This is version 167 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
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