UniProtKB - P56007 (SCOB_HELPY)
Protein
Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B
Gene
scoB
Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Functioni
Catalytic activityi
- EC:2.8.3.5PROSITE-ProRule annotation
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Active sitei | 43 | PROSITE-ProRule annotation | 1 |
GO - Molecular functioni
- 3-oxoacid CoA-transferase activity Source: UniProtKB-EC
- acetate CoA-transferase activity Source: GO_Central
- CoA-transferase activity Source: GO_Central
Keywordsi
Molecular function | Transferase |
Enzyme and pathway databases
BioCyci | HPY:HP0692-MONOMER MetaCyc:HP0692-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B (EC:2.8.3.5)Alternative name(s): OXCT B Succinyl-CoA:3-oxoacid CoA-transferase |
Gene namesi | Name:scoB Ordered Locus Names:HP_0692 |
Organismi | Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) |
Taxonomic identifieri | 85962 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000157921 | 1 – 207 | Succinyl-CoA:3-ketoacid coenzyme A transferase subunit BAdd BLAST | 207 |
Proteomic databases
PaxDbi | P56007 |
Interactioni
Subunit structurei
Heterodimer of a subunit A and a subunit B.
Binary interactionsi
P56007
With | #Exp. | IntAct |
---|---|---|
scoA [P56006] | 3 | EBI-7724043,EBI-7723842 |
Protein-protein interaction databases
DIPi | DIP-3482N |
IntActi | P56007, 4 interactors |
MINTi | P56007 |
STRINGi | 85962.C694_03565 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | P56007 |
ModBasei | Search... |
PDBe-KBi | Search... |
Family & Domainsi
Sequence similaritiesi
Belongs to the 3-oxoacid CoA-transferase subunit B family.Curated
Phylogenomic databases
eggNOGi | COG2057, Bacteria |
OMAi | VAMMHTN |
Family and domain databases
InterProi | View protein in InterPro IPR012791, 3-oxoacid_CoA-transf_B IPR004165, CoA_trans_fam_I IPR004164, CoA_transf_AS IPR037171, NagB/RpiA_transferase-like |
PANTHERi | PTHR13707, PTHR13707, 1 hit |
Pfami | View protein in Pfam PF01144, CoA_trans, 1 hit |
SMARTi | View protein in SMART SM00882, CoA_trans, 1 hit |
SUPFAMi | SSF100950, SSF100950, 1 hit |
TIGRFAMsi | TIGR02428, pcaJ_scoB_fam, 1 hit |
PROSITEi | View protein in PROSITE PS01274, COA_TRANSF_2, 1 hit |
i Sequence
Sequence statusi: Complete.
P56007-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MREAIIKRAA KELKEGMYVN LGIGLPTLVA NEVSGMNIVF QSENGLLGIG
60 70 80 90 100
AYPLEGSVDA DLINAGKETI TVVPGASFFN SADSFAMIRG GHIDLAILGG
110 120 130 140 150
MEVSQNGDLA NWMIPKKLIK GMGGAMDLVH GAKKVIVIME HCNKYGESKV
160 170 180 190 200
KKECSLPLTG KGVVHQLITD LAVFEFSNNA MKLVELQEGV SLDQVKEKTE
AEFEVRL
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 70 | I → V in CAA03917 (PubMed:9325289).Curated | 1 | |
Sequence conflicti | 196 | K → R in CAA03917 (PubMed:9325289).Curated | 1 | |
Sequence conflicti | 206 | R → H in CAA03917 (PubMed:9325289).Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000511 Genomic DNA Translation: AAD07744.1 AJ000086 Genomic DNA Translation: CAA03917.1 |
PIRi | D64606 |
RefSeqi | NP_207486.1, NC_000915.1 WP_001206261.1, NC_018939.1 |
Genome annotation databases
EnsemblBacteriai | AAD07744; AAD07744; HP_0692 |
KEGGi | hpy:HP0692 |
PATRICi | fig|85962.47.peg.740 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000511 Genomic DNA Translation: AAD07744.1 AJ000086 Genomic DNA Translation: CAA03917.1 |
PIRi | D64606 |
RefSeqi | NP_207486.1, NC_000915.1 WP_001206261.1, NC_018939.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
3RRL | X-ray | 2.29 | B/D | 1-207 | [»] | |
SMRi | P56007 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
DIPi | DIP-3482N |
IntActi | P56007, 4 interactors |
MINTi | P56007 |
STRINGi | 85962.C694_03565 |
Proteomic databases
PaxDbi | P56007 |
Protocols and materials databases
DNASUi | 899313 |
Genome annotation databases
EnsemblBacteriai | AAD07744; AAD07744; HP_0692 |
KEGGi | hpy:HP0692 |
PATRICi | fig|85962.47.peg.740 |
Phylogenomic databases
eggNOGi | COG2057, Bacteria |
OMAi | VAMMHTN |
Enzyme and pathway databases
BioCyci | HPY:HP0692-MONOMER MetaCyc:HP0692-MONOMER |
Family and domain databases
InterProi | View protein in InterPro IPR012791, 3-oxoacid_CoA-transf_B IPR004165, CoA_trans_fam_I IPR004164, CoA_transf_AS IPR037171, NagB/RpiA_transferase-like |
PANTHERi | PTHR13707, PTHR13707, 1 hit |
Pfami | View protein in Pfam PF01144, CoA_trans, 1 hit |
SMARTi | View protein in SMART SM00882, CoA_trans, 1 hit |
SUPFAMi | SSF100950, SSF100950, 1 hit |
TIGRFAMsi | TIGR02428, pcaJ_scoB_fam, 1 hit |
PROSITEi | View protein in PROSITE PS01274, COA_TRANSF_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | SCOB_HELPY | |
Accessioni | P56007Primary (citable) accession number: P56007 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1997 |
Last sequence update: | November 1, 1997 | |
Last modified: | February 10, 2021 | |
This is version 116 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families