UniProtKB - P54998 (SOXC_RHOSG)
Protein
Dibenzothiophene desulfurization enzyme C
Gene
soxC
Organism
Rhodococcus sp. (strain IGTS8)
Status
Functioni
Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide).
Miscellaneous
Encoded on an unnamed 120 kb plasmid.1 Publication
: dibenzothiophene degradation Pathwayi
This protein is involved in the pathway dibenzothiophene degradation, which is part of Sulfur metabolism.View all proteins of this organism that are known to be involved in the pathway dibenzothiophene degradation and in Sulfur metabolism.
GO - Molecular functioni
- flavin adenine dinucleotide binding Source: InterPro
- oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro
GO - Biological processi
- dibenzothiophene catabolic process Source: UniProtKB-UniPathway
Keywordsi
Molecular function | Oxidoreductase |
Enzyme and pathway databases
BioCyci | MetaCyc:MONOMER-264 |
UniPathwayi | UPA00346 |
Names & Taxonomyi
Protein namesi | Recommended name: Dibenzothiophene desulfurization enzyme CAlternative name(s): DBT sulfur dioxygenase |
Gene namesi | Name:soxC Synonyms:dszC |
Encoded oni | Plasmid unnamed1 Publication |
Organismi | Rhodococcus sp. (strain IGTS8) |
Taxonomic identifieri | 54064 [NCBI] |
Taxonomic lineagei | Bacteria › Actinobacteria › Corynebacteriales › Nocardiaceae › Rhodococcus › |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000072048 | 1 – 417 | Dibenzothiophene desulfurization enzyme CAdd BLAST | 417 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | P54998 |
ModBasei | Search... |
PDBe-KBi | Search... |
Family & Domainsi
Family and domain databases
Gene3Di | 1.10.540.10, 1 hit |
InterProi | View protein in InterPro IPR013107 Acyl-CoA_DH_C_dom IPR006091 Acyl-CoA_Oxase/DH_cen-dom IPR036250 AcylCo_DH-like_C IPR013786 AcylCoA_DH/ox_N IPR037069 AcylCoA_DH/ox_N_sf IPR009100 AcylCoA_DH/oxidase_NM_dom |
Pfami | View protein in Pfam PF08028 Acyl-CoA_dh_2, 1 hit PF02770 Acyl-CoA_dh_M, 1 hit PF02771 Acyl-CoA_dh_N, 1 hit |
SUPFAMi | SSF47203 SSF47203, 1 hit SSF56645 SSF56645, 1 hit |
i Sequence
Sequence statusi: Complete.
P54998-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MTLSPEKQHV RPRDAADNDP VAVARGLAEK WRATAVERDR AGGSATAERE
60 70 80 90 100
DLRASGLLSL LVPREYGGWG ADWPTAIEVV REIAAADGSL GHLFGYHLTN
110 120 130 140 150
APMIELIGSQ EQEEHLYTQI AQNNWWTGNA SSENNSHVLD WKVSATPTED
160 170 180 190 200
GGYVLNGTKH FCSGAKGSDL LFVFGVVQDD SPQQGAIIAA AIPTSRAGVT
210 220 230 240 250
PNDDWAAIGM RQTDSGSTDF HNVKVEPDEV LGAPNAFVLA FIQSERGSLF
260 270 280 290 300
APIAQLIFAN VYLGIAHGAL DAAREYTRTQ ARPWTPAGIQ QATEDPYTIR
310 320 330 340 350
SYGEFTIALQ GADAAAREAA HLLQTVWDKG DALTPEDRGE LMVKVSGVKA
360 370 380 390 400
LATNAALNIS SGVFEVIGAR GTHPRYGFDR FWRNVRTHSL HDPVSYKIAD
410
VGKHTLNGQY PIPGFTS
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 56 | G → A in AAA99484 (PubMed:7574582).Curated | 1 | |
Sequence conflicti | 251 | A → R in AAA99484 (PubMed:7574582).Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U08850 Genomic DNA Translation: AAA56673.1 L37363 Genomic DNA Translation: AAA99484.1 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U08850 Genomic DNA Translation: AAA56673.1 L37363 Genomic DNA Translation: AAA99484.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
4JEK | X-ray | 2.40 | A/B/C/D/E/F/G/H | 1-417 | [»] | |
SMRi | P54998 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Enzyme and pathway databases
UniPathwayi | UPA00346 |
BioCyci | MetaCyc:MONOMER-264 |
Family and domain databases
Gene3Di | 1.10.540.10, 1 hit |
InterProi | View protein in InterPro IPR013107 Acyl-CoA_DH_C_dom IPR006091 Acyl-CoA_Oxase/DH_cen-dom IPR036250 AcylCo_DH-like_C IPR013786 AcylCoA_DH/ox_N IPR037069 AcylCoA_DH/ox_N_sf IPR009100 AcylCoA_DH/oxidase_NM_dom |
Pfami | View protein in Pfam PF08028 Acyl-CoA_dh_2, 1 hit PF02770 Acyl-CoA_dh_M, 1 hit PF02771 Acyl-CoA_dh_N, 1 hit |
SUPFAMi | SSF47203 SSF47203, 1 hit SSF56645 SSF56645, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | SOXC_RHOSG | |
Accessioni | P54998Primary (citable) accession number: P54998 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | October 1, 1996 |
Last sequence update: | October 1, 1996 | |
Last modified: | May 8, 2019 | |
This is version 76 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, PlasmidDocuments
- PATHWAY comments
Index of metabolic and biosynthesis pathways - PDB cross-references
Index of Protein Data Bank (PDB) cross-references