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Protein

Nitrogen fixation nifHD2 region GlnB-like protein 2

Gene
N/A
Organism
Methanosarcina barkeri
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Could be involved in the regulation of nitrogen fixation.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processNitrogen fixation, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Nitrogen fixation nifHD2 region GlnB-like protein 2
Alternative name(s):
ORF-125
OrganismiMethanosarcina barkeri
Taxonomic identifieri2208 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001398031 – 125Nitrogen fixation nifHD2 region GlnB-like protein 2Add BLAST125

Structurei

3D structure databases

ProteinModelPortaliP54806
SMRiP54806
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the P(II) protein family.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiarCOG02308 Archaea
COG0347 LUCA

Family and domain databases

Gene3Di3.30.70.120, 1 hit
InterProiView protein in InterPro
IPR002187 N-reg_PII
IPR011322 N-reg_PII-like_a/b
IPR015867 N-reg_PII/ATP_PRibTrfase_C
IPR017918 N-reg_PII_CS
PANTHERiPTHR30115 PTHR30115, 1 hit
PfamiView protein in Pfam
PF00543 P-II, 1 hit
PRINTSiPR00340 PIIGLNB
SMARTiView protein in SMART
SM00938 P-II, 1 hit
SUPFAMiSSF54913 SSF54913, 1 hit
PROSITEiView protein in PROSITE
PS00638 PII_GLNB_CTER, 1 hit
PS51343 PII_GLNB_DOM, 1 hit

Sequencei

Sequence statusi: Complete.

P54806-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKEITAIIRM NKAQRTKDVL LECGFPSFTI RRVMGRGKQR GLCHEFNPPL
60 70 80 90 100
PDPEKEAETC IRFIPKRMFT IVVDDENVSE VVQKIIEVNQ TGNAGDGKIF
110 120
VSDVTEAIRI RTGESGEATV NKELV
Length:125
Mass (Da):14,048
Last modified:October 1, 1996 - v1
Checksum:i3E2891CDD3C9885C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U11291 Genomic DNA Translation: AAA65879.1
RefSeqiWP_048121470.1, NZ_CP009530.1

Genome annotation databases

GeneIDi24801825

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U11291 Genomic DNA Translation: AAA65879.1
RefSeqiWP_048121470.1, NZ_CP009530.1

3D structure databases

ProteinModelPortaliP54806
SMRiP54806
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi24801825

Phylogenomic databases

eggNOGiarCOG02308 Archaea
COG0347 LUCA

Family and domain databases

Gene3Di3.30.70.120, 1 hit
InterProiView protein in InterPro
IPR002187 N-reg_PII
IPR011322 N-reg_PII-like_a/b
IPR015867 N-reg_PII/ATP_PRibTrfase_C
IPR017918 N-reg_PII_CS
PANTHERiPTHR30115 PTHR30115, 1 hit
PfamiView protein in Pfam
PF00543 P-II, 1 hit
PRINTSiPR00340 PIIGLNB
SMARTiView protein in SMART
SM00938 P-II, 1 hit
SUPFAMiSSF54913 SSF54913, 1 hit
PROSITEiView protein in PROSITE
PS00638 PII_GLNB_CTER, 1 hit
PS51343 PII_GLNB_DOM, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiGLNB4_METBA
AccessioniPrimary (citable) accession number: P54806
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: October 10, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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